Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0914
         (700 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       23   1.8  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    23   3.2  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    22   4.2  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   5.5  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   5.5  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   5.5  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   5.5  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    21   7.3  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   7.3  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   7.3  

>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 8/15 (53%), Positives = 13/15 (86%)
 Frame = +3

Query: 288 PTEMDSSKDSEETST 332
           PT+++S ++ EETST
Sbjct: 427 PTQVESEEEDEETST 441


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +3

Query: 582 TTKTADISEQALEKFTKPDTKPSESP 659
           TT T   +    +  TKP TKP+  P
Sbjct: 164 TTSTTTRTTLTTKFTTKPSTKPTNKP 189


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 12/47 (25%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
 Frame = -3

Query: 143 NIWSCLLILWFNIWWLSGLFI*LRY*FMCRYFRYQWC--XLWLCLHA 9
           N++  LL+L+    W+S + + +   ++ R F Y  C   ++L  H+
Sbjct: 121 NLYMVLLLLFDAYLWISSVGVRMFQYYIGRSFTYYVCNTTIFLIFHS 167


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -3

Query: 56  RYFRYQWCXLWLCL 15
           RYF Y +  +W CL
Sbjct: 295 RYFIYMFVSVWKCL 308


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -3

Query: 56  RYFRYQWCXLWLCL 15
           RYF Y +  +W CL
Sbjct: 295 RYFIYMFVSVWKCL 308


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -3

Query: 56  RYFRYQWCXLWLCL 15
           RYF Y +  +W CL
Sbjct: 295 RYFIYMFVSVWKCL 308


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -3

Query: 56  RYFRYQWCXLWLCL 15
           RYF Y +  +W CL
Sbjct: 295 RYFIYMFVSVWKCL 308


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = -3

Query: 437 LIKIYGSCWRFMTIVYC 387
           L  I G+CW     +YC
Sbjct: 51  LSTILGTCWIIYVRIYC 67


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -1

Query: 88  FSYSSGINLCVDTSVISGVXC 26
           FSY  GI   +  +VIS   C
Sbjct: 150 FSYKCGIQYHICNTVISATVC 170


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -1

Query: 88  FSYSSGINLCVDTSVISGVXC 26
           FSY  GI   +  +VIS   C
Sbjct: 146 FSYKCGIQYHICNTVISATVC 166


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,562
Number of Sequences: 336
Number of extensions: 3230
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)