Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0914
(700 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_13432| Best HMM Match : Reticulon (HMM E-Value=5.1e-16) 35 0.055
SB_14156| Best HMM Match : Neuromodulin (HMM E-Value=1) 35 0.073
SB_8054| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23) 33 0.29
SB_39938| Best HMM Match : ANF_receptor (HMM E-Value=6.4e-14) 32 0.39
SB_47268| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.51
SB_47112| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.51
SB_32519| Best HMM Match : Pkinase (HMM E-Value=7.3e-39) 32 0.51
SB_14859| Best HMM Match : SEA (HMM E-Value=0.01) 31 0.90
SB_49714| Best HMM Match : RGS (HMM E-Value=6) 31 0.90
SB_30283| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84) 30 2.1
SB_28214| Best HMM Match : Drf_FH1 (HMM E-Value=3.8) 30 2.1
SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_41789| Best HMM Match : Mucin (HMM E-Value=0.56) 29 2.7
SB_41192| Best HMM Match : Mucin (HMM E-Value=0.56) 29 2.7
SB_30326| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_29436| Best HMM Match : PAN (HMM E-Value=0.021) 29 2.7
SB_9453| Best HMM Match : Mucin (HMM E-Value=0.56) 29 2.7
SB_9159| Best HMM Match : Adhesin_P1 (HMM E-Value=8.1) 29 2.7
SB_53729| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_38809| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_33280| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_3565| Best HMM Match : ASC (HMM E-Value=1.1e-12) 29 3.6
SB_32384| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_5589| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_16428| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_34673| Best HMM Match : UK (HMM E-Value=0.6) 28 6.3
SB_52192| Best HMM Match : Fibrinogen_C (HMM E-Value=0.077) 28 8.4
SB_46782| Best HMM Match : DUF1610 (HMM E-Value=0.97) 28 8.4
SB_43379| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_24622| Best HMM Match : F5_F8_type_C (HMM E-Value=7.4e-17) 28 8.4
SB_24596| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_12442| Best HMM Match : zf-MYND (HMM E-Value=0.0028) 28 8.4
SB_39667| Best HMM Match : rve (HMM E-Value=9e-32) 28 8.4
SB_34910| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
>SB_13432| Best HMM Match : Reticulon (HMM E-Value=5.1e-16)
Length = 621
Score = 35.1 bits (77), Expect = 0.055
Identities = 20/74 (27%), Positives = 35/74 (47%)
Frame = +3
Query: 432 DQSSVSTTELIYKKETTPTVQEPTESPEKITSTSSKPLDAVHEQDLIPTSTTKTADISEQ 611
++ V + E + + ET P EP E PE ++STS+ +D + ++ P + I E
Sbjct: 265 EEGKVDSEEKVEEPETFPDSTEPEEEPEPVSSTSN--IDLLMDETAQPAQPQPSPTIIES 322
Query: 612 ALEKFTKPDTKPSE 653
+ + D SE
Sbjct: 323 PPAEESSKDVSDSE 336
>SB_14156| Best HMM Match : Neuromodulin (HMM E-Value=1)
Length = 462
Score = 34.7 bits (76), Expect = 0.073
Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Frame = +3
Query: 429 FDQSSVSTTELIYKKETTPTVQEPTESPEKITSTSSKPLDAVHEQDLIPTS-TTKTADIS 605
F + TE K+E T + E E + + K H+Q+ +P S T KT +S
Sbjct: 334 FPKHEQEITESSDKQENTAFPKHGQEITESLGNKQEKNTSPRHDQENVPQSLTNKTVTLS 393
Query: 606 EQALEKFTKPDTKPSES 656
+ LE T P KP S
Sbjct: 394 LE-LENTTSPGQKPDNS 409
>SB_8054| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 415
Score = 33.9 bits (74), Expect = 0.13
Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
Frame = +3
Query: 408 TPTATIDFDQSSVSTTELIYKKETTPTV----QEPTESPEKITSTSSKPLDAVHEQDLIP 575
TPT T ++ +TT+ +T T +E T + E T T++KPL + ++P
Sbjct: 240 TPTTTTSASTTTATTTKATTTSVSTTTATTKEEESTTTAETTTVTATKPLSSEETSTMLP 299
Query: 576 TST-TKTADISEQALEKFTK 632
T+ T D Q TK
Sbjct: 300 TTAPTPKPDTECQVQTMLTK 319
>SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 33.1 bits (72), Expect = 0.22
Identities = 28/89 (31%), Positives = 34/89 (38%), Gaps = 7/89 (7%)
Frame = +3
Query: 399 SHKTPTATIDFDQSSVSTTEL-IYKKETTPTVQEPT------ESPEKITSTSSKPLDAVH 557
S TPT+T + TT +TTPT PT ++P TST +KP A
Sbjct: 40 SPTTPTSTAPTQTTPTPTTPSPTAPTQTTPTPATPTPTTPTPKTPTPTTSTLTKPTPATT 99
Query: 558 EQDLIPTSTTKTADISEQALEKFTKPDTK 644
PT T T TKP K
Sbjct: 100 PTPTKPTPTAHTPTTPTPTAHTPTKPTPK 128
Score = 28.3 bits (60), Expect = 6.3
Identities = 21/84 (25%), Positives = 29/84 (34%)
Frame = +3
Query: 408 TPTATIDFDQSSVSTTELIYKKETTPTVQEPTESPEKITSTSSKPLDAVHEQDLIPTSTT 587
TP T + + +T TTPT PT++ T+ S PT TT
Sbjct: 19 TPQTTPTPTKPTPTTHTPTKPSPTTPTSTAPTQTTPTPTTPSPTAPTQTTPTPATPTPTT 78
Query: 588 KTADISEQALEKFTKPDTKPSESP 659
T TKP + +P
Sbjct: 79 PTPKTPTPTTSTLTKPTPATTPTP 102
>SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23)
Length = 2123
Score = 32.7 bits (71), Expect = 0.29
Identities = 28/119 (23%), Positives = 39/119 (32%), Gaps = 1/119 (0%)
Frame = +3
Query: 270 ASKEQHPTEMDSSKDSEETSTQYKIPXXXXXXXXXXXXXAVDDSHKTPTATIDFDQSSVS 449
A + Q PT S TST IP ++ T T + +
Sbjct: 1741 AQEGQIPTLSTLKTTSTSTSTTKYIPPPHSPPTTTTTTTTTPETTAPRTTTPETTTPETT 1800
Query: 450 TTELIYKKETTPTVQEP-TESPEKITSTSSKPLDAVHEQDLIPTSTTKTADISEQALEK 623
T + T P P T +P+K T+ PL H STT+ + A K
Sbjct: 1801 TPRTTTPETTKPRTTTPKTTTPKKTTAAKKAPLPVTHATTSHAPSTTENPTTARPATTK 1859
Score = 31.9 bits (69), Expect = 0.51
Identities = 19/55 (34%), Positives = 25/55 (45%)
Frame = +3
Query: 492 QEPTESPEKITSTSSKPLDAVHEQDLIPTSTTKTADISEQALEKFTKPDTKPSES 656
Q PT S K TSTS+ + PT+TT T E + T P+T E+
Sbjct: 1745 QIPTLSTLKTTSTSTSTTKYIPPPHSPPTTTTTTTTTPETTAPRTTTPETTTPET 1799
>SB_39938| Best HMM Match : ANF_receptor (HMM E-Value=6.4e-14)
Length = 966
Score = 32.3 bits (70), Expect = 0.39
Identities = 17/66 (25%), Positives = 33/66 (50%)
Frame = +3
Query: 462 IYKKETTPTVQEPTESPEKITSTSSKPLDAVHEQDLIPTSTTKTADISEQALEKFTKPDT 641
+ + ++TP EPTE+PE + S + + A +++P+ + I + F KP+
Sbjct: 735 VKQTKSTPVESEPTETPEVVPSEKLEGIQA-EVPEVMPSEKQEIIHIEVPEVMAFEKPEI 793
Query: 642 KPSESP 659
+E P
Sbjct: 794 IHTEVP 799
>SB_47268| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 722
Score = 31.9 bits (69), Expect = 0.51
Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Frame = +3
Query: 462 IYKKETTPTVQEPTESPEKITSTSSKPLDAVHEQDLIPTSTTKTADISE---QALEKFTK 632
+ +K T P V +K T ++ KPL + + P STTK SE + + K K
Sbjct: 545 VEEKNTLPVVPTWKSPVKKPTKSTVKPLPKLAKTTFKPPSTTKIEGASELKPRKMPKLVK 604
Query: 633 PDTKPS 650
P PS
Sbjct: 605 PFVTPS 610
>SB_47112| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 970
Score = 31.9 bits (69), Expect = 0.51
Identities = 32/160 (20%), Positives = 57/160 (35%)
Frame = +3
Query: 111 EPKDQETTPYVVELEEHTQKSELSTIYSTTQETTSASXXXXXXXXXXXXXXXXASKEQHP 290
+P Q+TT + + T + +T +T++ T+ + +Q
Sbjct: 187 QPTTQQTTTNLPSTRQPTTNQQTTTTLPSTKQPTTTQQTTTTIPSTKQP----TTTQQTT 242
Query: 291 TEMDSSKDSEETSTQYKIPXXXXXXXXXXXXXAVDDSHKTPTATIDFDQSSVSTTELIYK 470
T + S+K T S K PT T + ST +
Sbjct: 243 TTLPSTKQPTTTQQTTTTLPSTKQPTTPQLTTTTFPSTKQPTTTQQTTATLPSTKQPTTT 302
Query: 471 KETTPTVQEPTESPEKITSTSSKPLDAVHEQDLIPTSTTK 590
++TT T+ P+ P ++ T+ +P E L PT T+
Sbjct: 303 QQTTATLPTPSTKPTTVSPTTRQPPPEPTE-PLEPTEPTE 341
Score = 30.3 bits (65), Expect = 1.6
Identities = 22/87 (25%), Positives = 35/87 (40%), Gaps = 3/87 (3%)
Frame = +3
Query: 399 SHKTPTATIDFDQSSVSTTELIYKKETT---PTVQEPTESPEKITSTSSKPLDAVHEQDL 569
S K PT T + ST + ++TT P+ ++PT T+ S +Q
Sbjct: 231 STKQPTTTQQTTTTLPSTKQPTTTQQTTTTLPSTKQPTTPQLTTTTFPSTKQPTTTQQTT 290
Query: 570 IPTSTTKTADISEQALEKFTKPDTKPS 650
+TK ++Q P TKP+
Sbjct: 291 ATLPSTKQPTTTQQTTATLPTPSTKPT 317
>SB_32519| Best HMM Match : Pkinase (HMM E-Value=7.3e-39)
Length = 1486
Score = 31.9 bits (69), Expect = 0.51
Identities = 19/71 (26%), Positives = 34/71 (47%)
Frame = +3
Query: 387 AVDDSHKTPTATIDFDQSSVSTTELIYKKETTPTVQEPTESPEKITSTSSKPLDAVHEQD 566
+++D +++P + D Q ST + + +K + EP++ PEK T S A +
Sbjct: 1266 SLEDYNRSPRRSRDLHQVRRSTIDNVSRKAIEGVLHEPSKQPEKATRESQD--KARQRRK 1323
Query: 567 LIPTSTTKTAD 599
I T K+ D
Sbjct: 1324 TISLDTRKSRD 1334
>SB_14859| Best HMM Match : SEA (HMM E-Value=0.01)
Length = 1776
Score = 31.1 bits (67), Expect = 0.90
Identities = 22/74 (29%), Positives = 30/74 (40%), Gaps = 2/74 (2%)
Frame = +3
Query: 408 TPTATIDFDQSSVSTT-ELIYKKETTPTVQEP-TESPEKITSTSSKPLDAVHEQDLIPTS 581
TP T + +TT E + TTP P T +P+K T+ PL H S
Sbjct: 185 TPRTTTPVTTTPRTTTPETTTPETTTPRTTTPETTTPKKTTAAKKAPLPVTHATTSHAPS 244
Query: 582 TTKTADISEQALEK 623
TT+ + A K
Sbjct: 245 TTENPTTARPATTK 258
>SB_49714| Best HMM Match : RGS (HMM E-Value=6)
Length = 167
Score = 31.1 bits (67), Expect = 0.90
Identities = 15/27 (55%), Positives = 17/27 (62%)
Frame = +1
Query: 613 LLRSSQNLTLSPVNHLXTELAKPITSE 693
LL S+ NLT NHL +EL ITSE
Sbjct: 44 LLSSASNLTCQLTNHLTSELTNDITSE 70
>SB_30283| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1417
Score = 30.3 bits (65), Expect = 1.6
Identities = 25/74 (33%), Positives = 35/74 (47%), Gaps = 6/74 (8%)
Frame = +3
Query: 438 SSVSTTELIYKKETTPTVQEPTESPEKITS-----TSSKPLDAVHEQDLIPTSTTKT-AD 599
SS T+ + T+P+ Q T P+ TS TS P Q IP ++T T AD
Sbjct: 690 SSQQTSTSPPQTTTSPSQQTSTSPPQTTTSPSQQTTSPPPSSPSIGQPWIPVTSTPTHAD 749
Query: 600 ISEQALEKFTKPDT 641
E ++ +KPDT
Sbjct: 750 QRETDQQEGSKPDT 763
>SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84)
Length = 509
Score = 29.9 bits (64), Expect = 2.1
Identities = 20/77 (25%), Positives = 32/77 (41%)
Frame = +3
Query: 411 PTATIDFDQSSVSTTELIYKKETTPTVQEPTESPEKITSTSSKPLDAVHEQDLIPTSTTK 590
P+ + ++++ TT T T +PT + T+T +KP PT+ T
Sbjct: 35 PSQQLPHNRTTTPTTPTTTTPPATTTPTKPTNTTPPATTTPTKPTTTTPPATTTPTTPTT 94
Query: 591 TADISEQALEKFTKPDT 641
T + A TKP T
Sbjct: 95 T---TPPATTTPTKPTT 108
>SB_28214| Best HMM Match : Drf_FH1 (HMM E-Value=3.8)
Length = 361
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/66 (27%), Positives = 30/66 (45%)
Frame = +3
Query: 426 DFDQSSVSTTELIYKKETTPTVQEPTESPEKITSTSSKPLDAVHEQDLIPTSTTKTADIS 605
D D ++ K + T +PT + TSTS+KP A + P+ +T + +
Sbjct: 3 DLDSDLFGSSLRSNKTPSKATSPKPTAPATRPTSTSTKPTTASTKPTSPPSQAARTRNTA 62
Query: 606 EQALEK 623
E+ EK
Sbjct: 63 EKPEEK 68
>SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3934
Score = 29.9 bits (64), Expect = 2.1
Identities = 20/78 (25%), Positives = 38/78 (48%)
Frame = +3
Query: 387 AVDDSHKTPTATIDFDQSSVSTTELIYKKETTPTVQEPTESPEKITSTSSKPLDAVHEQD 566
++ D ++ ++F +SS+ + +K+ E E K+T+ +KPLDAV +
Sbjct: 1427 SLKDDLESQVDDLNFQKSSLEKENDLLRKK-----MEIVEEEMKLTAIENKPLDAVDAKP 1481
Query: 567 LIPTSTTKTADISEQALE 620
L + A IS+ +E
Sbjct: 1482 LSEENEALKAQISQITVE 1499
>SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4856
Score = 29.5 bits (63), Expect = 2.7
Identities = 23/77 (29%), Positives = 40/77 (51%)
Frame = +3
Query: 420 TIDFDQSSVSTTELIYKKETTPTVQEPTESPEKITSTSSKPLDAVHEQDLIPTSTTKTAD 599
T D D+S++S T +TT Q+ T S +TS + P +A E+ + TST A
Sbjct: 3588 TQDKDESTLSKTS-----QTTCAEQQSTPSSTSMTSLHTDP-NATREERV--TSTKALAP 3639
Query: 600 ISEQALEKFTKPDTKPS 650
++ Q ++ + + +PS
Sbjct: 3640 VASQRVQTHSVQEQEPS 3656
>SB_41789| Best HMM Match : Mucin (HMM E-Value=0.56)
Length = 683
Score = 29.5 bits (63), Expect = 2.7
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +3
Query: 471 KETTPTVQEPTESPEKITSTSSKPLDAVHEQDL--IPTSTTKTADISEQALEKFT 629
K P ++EP +SP +T S L A + PT+TT T I E L+ T
Sbjct: 339 KSGVPLMREPPQSPTPAVTTPSADLAASKFPTITNTPTATTNTPTIPEGILQAKT 393
>SB_41192| Best HMM Match : Mucin (HMM E-Value=0.56)
Length = 683
Score = 29.5 bits (63), Expect = 2.7
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +3
Query: 471 KETTPTVQEPTESPEKITSTSSKPLDAVHEQDL--IPTSTTKTADISEQALEKFT 629
K P ++EP +SP +T S L A + PT+TT T I E L+ T
Sbjct: 339 KSGVPLMREPPQSPTPAVTTPSADLAASKFPTITNTPTATTNTPTIPEGILQAKT 393
>SB_30326| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1346
Score = 29.5 bits (63), Expect = 2.7
Identities = 24/77 (31%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
Frame = +3
Query: 417 ATIDFDQSSVSTTELIYKKETTPTVQEPTESPEKITSTSSKPLDAVHEQDLIPTSTTKTA 596
AT + S +TTE + T + TE PE T KP + E T TT A
Sbjct: 1147 ATEASTEPSTTTTEPARTEATATAAEAKTEEPEVAT---EKPSETTTEATKAATETTTEA 1203
Query: 597 DISE-QALEKFTKPDTK 644
E + + TKP T+
Sbjct: 1204 TKPETETTTEATKPATE 1220
>SB_29436| Best HMM Match : PAN (HMM E-Value=0.021)
Length = 419
Score = 29.5 bits (63), Expect = 2.7
Identities = 24/118 (20%), Positives = 42/118 (35%), Gaps = 1/118 (0%)
Frame = +3
Query: 294 EMDSSKDSEETSTQYKIPXXXXXXXXXXXXXAVDDSHKTPTATIDFDQSSVSTTELIYKK 473
E S+ +S ET + + P T QS+ T E
Sbjct: 93 ETQSTTESPETQSTTETPETQSTTESPETQSTTQTPETQSTTETPETQSTTETPET-QST 151
Query: 474 ETTPTVQEPTESPE-KITSTSSKPLDAVHEQDLIPTSTTKTADISEQALEKFTKPDTK 644
TP Q PT++PE + T+T+ + +D + + T+ + + DT+
Sbjct: 152 TDTPETQSPTQTPETQSTTTTPETQSTTDTRDPVNNNDTRDPVNNNDTRDPVNNRDTR 209
>SB_9453| Best HMM Match : Mucin (HMM E-Value=0.56)
Length = 642
Score = 29.5 bits (63), Expect = 2.7
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +3
Query: 471 KETTPTVQEPTESPEKITSTSSKPLDAVHEQDL--IPTSTTKTADISEQALEKFT 629
K P ++EP +SP +T S L A + PT+TT T I E L+ T
Sbjct: 339 KSGVPLMREPPQSPTPAVTTPSADLAASKFPTITNTPTATTNTPTIPEGILQAKT 393
>SB_9159| Best HMM Match : Adhesin_P1 (HMM E-Value=8.1)
Length = 267
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +3
Query: 417 ATIDFDQSSVSTTELIYKKETTPTVQEPTESPEKITST 530
A++D S +S + + K+TTPT Q+P +P + T
Sbjct: 4 ASMDHTSSRLSESSMRSYKKTTPTKQDPRGAPPSLKKT 41
>SB_53729| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 208
Score = 29.1 bits (62), Expect = 3.6
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Frame = +3
Query: 399 SHKTPTATIDFDQSSVSTTELIYKKETTPTVQEPTESPEKITSTSSKPLDAVHEQ-DLIP 575
+H TP ++Q S T E + T + TES +ITS++ K A E + +
Sbjct: 34 THYTPHEGFSYEQLSSETIENDRENTQTFELGNETESSTEITSSNGKTSVAHQESVESVK 93
Query: 576 TSTTKTADISEQALEKFTKPDT 641
+S+ A +E A + PD+
Sbjct: 94 SSSDVFAGSTESADGLESSPDS 115
>SB_38809| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 188
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +3
Query: 471 KETTPTVQEPTESPEKITSTSSKPLDAVHEQDLIPTSTTKTADI 602
K TTP V ++ T T S+ AVH QD++PT + T +I
Sbjct: 128 KPTTPMVPGKVDTEAVDTKTVSQ---AVHCQDVLPTKSQSTEEI 168
>SB_33280| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 186
Score = 29.1 bits (62), Expect = 3.6
Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +3
Query: 411 PTATIDFDQSSVSTTELIYKKETTPTVQEPTESPEKITSTSS-KPLDAVHEQDLIPTSTT 587
PT TI ++ +T E ETT T +EPT E T+T + + PT+TT
Sbjct: 22 PT-TITETTTTKTTEEPTTITETTTTTEEPTTITETTTTTEEPTTITEITTTTEEPTTTT 80
Query: 588 KTA 596
TA
Sbjct: 81 TTA 83
Score = 28.3 bits (60), Expect = 6.3
Identities = 25/94 (26%), Positives = 38/94 (40%), Gaps = 2/94 (2%)
Frame = +3
Query: 411 PTATIDFDQSSVSTTELIYKKETTPTVQEPTESPEKITSTSSKPLDAVHEQDLI--PTST 584
PT I+ ++ T I + TT T +EPT E T+T+ +P PT+
Sbjct: 9 PTTIIETTTTTEEPTT-ITETTTTKTTEEPTTITET-TTTTEEPTTITETTTTTEEPTTI 66
Query: 585 TKTADISEQALEKFTKPDTKPSESPXH*TG*TDN 686
T+ +E+ T P+ H TDN
Sbjct: 67 TEITTTTEEPTTTTTTAAETPTTIMRHNNRRTDN 100
Score = 28.3 bits (60), Expect = 6.3
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = +3
Query: 405 KTPTATIDFDQSSVSTTELIYKKETTPTVQEPTESPEKITSTSSKPLDAVHEQDLIPTS 581
KT +++ +T E ETT T +EPT E IT+T+ +P PT+
Sbjct: 32 KTTEEPTTITETTTTTEEPTTITETTTTTEEPTTITE-ITTTTEEPTTTTTTAAETPTT 89
>SB_3565| Best HMM Match : ASC (HMM E-Value=1.1e-12)
Length = 575
Score = 29.1 bits (62), Expect = 3.6
Identities = 23/84 (27%), Positives = 38/84 (45%)
Frame = +3
Query: 396 DSHKTPTATIDFDQSSVSTTELIYKKETTPTVQEPTESPEKITSTSSKPLDAVHEQDLIP 575
+S PT +Q++V+TT T PT EPT +P T+ +P D P
Sbjct: 11 ESTAVPTTAPTTEQTTVATTIPTTIPTTVPTT-EPTTAPTTPEPTTLEPTD--------P 61
Query: 576 TSTTKTADISEQALEKFTKPDTKP 647
+T + + E+ + FT ++P
Sbjct: 62 PTTERPLTMEEKKEQAFTGEVSQP 85
>SB_32384| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 609
Score = 28.7 bits (61), Expect = 4.8
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Frame = +3
Query: 468 KKETTPTVQEPTESPEK--ITSTSSKPLDAVHEQ-DLIPTSTTKTADISEQALEKFTKPD 638
KKETT + EP +P K +T++K V ++ DL+ A+ ++AL+K
Sbjct: 502 KKETTSKLAEPVTNPVKSVAKATATKVAKVVKKKADLVVKKLKAVAEKLKEALKKADPVA 561
Query: 639 TKP 647
KP
Sbjct: 562 EKP 564
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 28.7 bits (61), Expect = 4.8
Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Frame = +3
Query: 441 SVSTTELIYKKETTPTVQEPTESPEK--ITSTSSKPLDAVHEQDLIPTSTTKTAD 599
S E ETT T E TE+PE + T+ P + + +P TTKT D
Sbjct: 4487 STEAPETTMAPETTAT--ESTETPETTIVPETTVAPETTMAPEATVPPETTKTPD 4539
>SB_5589| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 583
Score = 28.7 bits (61), Expect = 4.8
Identities = 25/100 (25%), Positives = 38/100 (38%)
Frame = +3
Query: 288 PTEMDSSKDSEETSTQYKIPXXXXXXXXXXXXXAVDDSHKTPTATIDFDQSSVSTTELIY 467
P++ S++ + T+ P S TP +++ + S T +
Sbjct: 159 PSQSSMSQEMDSMETEPTPPPKEMPPQPAEESRTPPGSRSTPEPSLEEPEVSAMGTPVST 218
Query: 468 KKETTPTVQEPTESPEKITSTSSKPLDAVHEQDLIPTSTT 587
+ T T P E P STSSKP A I TST+
Sbjct: 219 PQATVQTPPPPPE-PSNEPSTSSKP-KASPSPSSITTSTS 256
>SB_16428| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1005
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +3
Query: 492 QEPTESPEKITSTSSKPLDAVHEQDLIPTSTTKTADISEQALEKFTK 632
+E +P+ S + P D QDL+PTS +S++ +EK+ +
Sbjct: 498 EEGANTPDNEKSATDTPSDDKPHQDLVPTSPPPAKPLSDR-VEKWER 543
>SB_34673| Best HMM Match : UK (HMM E-Value=0.6)
Length = 641
Score = 28.3 bits (60), Expect = 6.3
Identities = 21/85 (24%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
Frame = +3
Query: 387 AVDDSHKTPTATIDFDQSSVSTTELIYKKETTPT-VQEPTESPEKITSTSSKPLDAVHEQ 563
A + SH+ T T D Q + + + +++ P QE T+ ++ + +P D HE
Sbjct: 151 APERSHEV-TNTPDKPQEVTDSPDRLQEEDDAPDRPQEATDESDRSQEATDEP-DRSHEA 208
Query: 564 DLIPTSTTKTADISEQALEKFTKPD 638
P +T D+ ++ E PD
Sbjct: 209 TDEPDRPQETTDVPGRSQEVTNAPD 233
Score = 28.3 bits (60), Expect = 6.3
Identities = 23/90 (25%), Positives = 42/90 (46%)
Frame = +3
Query: 387 AVDDSHKTPTATIDFDQSSVSTTELIYKKETTPTVQEPTESPEKITSTSSKPLDAVHEQD 566
A D+S ++ AT + D+S +T E QE T+ P + ++ P D E +
Sbjct: 188 ATDESDRSQEATDEPDRSHEATDE-------PDRPQETTDVPGRSQEVTNAP-DRQQEAN 239
Query: 567 LIPTSTTKTADISEQALEKFTKPDTKPSES 656
+ +T D+ +++ E PD +P E+
Sbjct: 240 DVSDRPQETTDVPDRSQEVTNTPD-RPQEA 268
>SB_52192| Best HMM Match : Fibrinogen_C (HMM E-Value=0.077)
Length = 723
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +3
Query: 471 KETTPTVQEPTESPEKITSTSSKPLDAVHEQDLIPTSTTKTADISEQALE 620
KE TV EP+ P+K +S+P + + T+ T D + L+
Sbjct: 466 KEPEITVPEPSLEPKKTELPASEPASTLRRSTRLKTTPTHLKDYYKSCLD 515
>SB_46782| Best HMM Match : DUF1610 (HMM E-Value=0.97)
Length = 451
Score = 27.9 bits (59), Expect = 8.4
Identities = 21/93 (22%), Positives = 39/93 (41%), Gaps = 1/93 (1%)
Frame = +3
Query: 333 QYKIPXXXXXXXXXXXXXAVDDSHKTPTATIDFDQSSV-STTELIYKKETTPTVQEPTES 509
QY+ P AV +PT + ++ S+ E +KE TP ++S
Sbjct: 215 QYRHPTLPPTTYKLALAVAVGMKPTSPTKPKAVIKRTIPSSDEEDSEKEKTPVTPTKSKS 274
Query: 510 PEKITSTSSKPLDAVHEQDLIPTSTTKTADISE 608
P KI S D+ +++ S+ K+ ++ +
Sbjct: 275 PTKIRRLLSSSSDSASDEESCQESSQKSDELDQ 307
>SB_43379| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3066
Score = 27.9 bits (59), Expect = 8.4
Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Frame = -1
Query: 547 SKGLLD---VEVIFSGDSVGSCTVGVVSFL*ISSVVETLL 437
+KGL D + VI G +VGSC V V+ L S V+E LL
Sbjct: 2313 NKGLRDCCLIVVITVGAAVGSCVVFVLPTLASSMVMERLL 2352
>SB_24622| Best HMM Match : F5_F8_type_C (HMM E-Value=7.4e-17)
Length = 897
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +1
Query: 295 KWTLLRIQRKHRHSTKFQKVRLF-PRFQKYQVQ*TIVIKR 411
+W + + + RH T +QKV+ F PR Q I+I R
Sbjct: 692 RWVMFKETQNRRHETIWQKVKGFSPRMLNKQQNDAIIIDR 731
>SB_24596| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1907
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +3
Query: 471 KETTPTVQEPTESPEKITSTSSKPLDAVHEQDLIPTSTTKTADISEQ 611
KE TV EP+ P+K +S+P + + T+ T D S +
Sbjct: 899 KEPEITVPEPSLEPKKTELPASEPASTLRRSTRLKTTPTHLKDYSSR 945
>SB_12442| Best HMM Match : zf-MYND (HMM E-Value=0.0028)
Length = 3809
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/71 (21%), Positives = 30/71 (42%)
Frame = +3
Query: 390 VDDSHKTPTATIDFDQSSVSTTELIYKKETTPTVQEPTESPEKITSTSSKPLDAVHEQDL 569
VD T + + S + L + PTV +E+ + + ST+ K H Q++
Sbjct: 1539 VDPLATTTSDVVYITHSPKANEPLATRAGELPTVMHSSEAFQPLPSTADKVRTVTHSQEV 1598
Query: 570 IPTSTTKTADI 602
+ + T ++
Sbjct: 1599 VSSLTITAGEV 1609
>SB_39667| Best HMM Match : rve (HMM E-Value=9e-32)
Length = 1845
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/61 (26%), Positives = 24/61 (39%)
Frame = +3
Query: 471 KETTPTVQEPTESPEKITSTSSKPLDAVHEQDLIPTSTTKTADISEQALEKFTKPDTKPS 650
KE TV EP+ P+K +S+P + + T+ T D + K T
Sbjct: 1127 KEPEITVPEPSLEPKKTELPASEPASTLRRSTRLKTTPTHLKDYKKYNSSKATNEKADSD 1186
Query: 651 E 653
E
Sbjct: 1187 E 1187
>SB_34910| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2147
Score = 27.9 bits (59), Expect = 8.4
Identities = 38/206 (18%), Positives = 69/206 (33%), Gaps = 1/206 (0%)
Frame = +3
Query: 42 ITEVSTHKLIPELYEKSTEPPYVEPKDQETTPYVVELEEHTQKSELSTIYSTTQETTSAS 221
+T + ++ + PP + + ++ TQ+S S + S TQE S+
Sbjct: 952 VTSATQESRSSQVTSVTQNPPSSQVTSVTQESHSTQVTSATQESRSSQVTSVTQEPPSSQ 1011
Query: 222 XXXXXXXXXXXXXXXXASKEQHPTEMDSSKDSEETSTQYKIPXXXXXXXXXXXXXAVDDS 401
++ ++ P+ +S E S+Q S
Sbjct: 1012 --VTSVTQESRSSQVTSATQESPSSQVTSVTQESRSSQVTSVTQESPSSQVTSVTQESRS 1069
Query: 402 HKTPTATIDFDQSSV-STTELIYKKETTPTVQEPTESPEKITSTSSKPLDAVHEQDLIPT 578
+ +AT + S V S T+ + T QE + S + ++T V P
Sbjct: 1070 SQVTSATQESPSSQVTSVTQESPSSQVTSATQE-SRSSQVTSATQESRSSQVTSATQEPP 1128
Query: 579 STTKTADISEQALEKFTKPDTKPSES 656
ST T+ E + T +P S
Sbjct: 1129 STQVTSVTHEPPSSQVTSATQEPPSS 1154
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,366,303
Number of Sequences: 59808
Number of extensions: 372914
Number of successful extensions: 1728
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1546
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1711
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1829596184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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