Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0914
(700 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g15980.1 68417.m02426 pectinesterase family protein contains ... 32 0.42
At1g72150.1 68414.m08342 SEC14 cytosolic factor family protein /... 31 0.56
At5g62550.1 68418.m07850 expressed protein 31 0.97
At3g57300.1 68416.m06378 transcriptional activator, putative sim... 30 1.3
At5g55040.1 68418.m06859 DNA-binding bromodomain-containing prot... 30 1.7
At3g19070.1 68416.m02422 cell wall protein-related similar to ve... 29 2.2
At5g52710.1 68418.m06543 heavy-metal-associated domain-containin... 29 3.0
At1g72160.1 68414.m08343 SEC14 cytosolic factor family protein /... 29 3.0
At5g17630.1 68418.m02067 glucose-6-phosphate/phosphate transloca... 29 3.9
At5g07880.1 68418.m00908 SNAP25 homologous protein, putative / s... 28 5.2
At3g02860.2 68416.m00279 expressed protein 28 5.2
At3g02860.1 68416.m00278 expressed protein 28 5.2
At1g09730.1 68414.m01092 Ulp1 protease family protein low simila... 28 6.8
At5g54120.1 68418.m06738 expressed protein 27 9.0
At5g51850.1 68418.m06428 expressed protein similar to unknown pr... 27 9.0
At5g46250.2 68418.m05694 RNA recognition motif (RRM)-containing ... 27 9.0
At5g46250.1 68418.m05693 RNA recognition motif (RRM)-containing ... 27 9.0
At4g16170.1 68417.m02455 expressed protein 27 9.0
At3g05740.1 68416.m00644 DNA helicase (RECQI1) identical to DNA ... 27 9.0
At2g29070.2 68415.m03533 ubiquitin fusion degradation UFD1 famil... 27 9.0
At2g29070.1 68415.m03534 ubiquitin fusion degradation UFD1 famil... 27 9.0
>At4g15980.1 68417.m02426 pectinesterase family protein contains
Pfam profile: PF01095 pectinesterase
Length = 701
Score = 31.9 bits (69), Expect = 0.42
Identities = 22/90 (24%), Positives = 39/90 (43%), Gaps = 4/90 (4%)
Frame = +3
Query: 390 VDDSHKTPTATIDFDQSSVSTTELIYKKETTPTVQEPTESPEKITSTSSKPLDAVHEQDL 569
VD S P + +QSS S+ ++ ++P+K + ++PLD D
Sbjct: 253 VDSSENQPVDSSSENQSSDSSNNRPLDSSKNQQMESSEDTPKKSAFSGNQPLD--DSSDK 310
Query: 570 IPTSTTKT----ADISEQALEKFTKPDTKP 647
+P +T + D SE +K T + +P
Sbjct: 311 LPQKSTSSENQPLDSSENPPQKSTSSENRP 340
>At1g72150.1 68414.m08342 SEC14 cytosolic factor family protein /
phosphoglyceride transfer family protein similar to
SEC14-like protein 2 (Alpha-tocopherol associated
protein) (TAP) (bTAP) (Fragment) (SP:P58875) {Bos
taurus}; similar to GI:807956 from [Saccharomyces
cerevisiae]; contains Pfam PF00650 : CRAL/TRIO domain;
contains Pfam PF03765 : CRAL/TRIO, N-terminus
Length = 573
Score = 31.5 bits (68), Expect = 0.56
Identities = 20/73 (27%), Positives = 36/73 (49%)
Frame = +3
Query: 408 TPTATIDFDQSSVSTTELIYKKETTPTVQEPTESPEKITSTSSKPLDAVHEQDLIPTSTT 587
TP A + + VS + + +KE TP + P EK S + V E+ ++ T+
Sbjct: 32 TPVAEKEEVAAPVSDEKAVPEKEVTPEKEAPAAEAEKSVSVKEEETVVVAEKVVVLTA-- 89
Query: 588 KTADISEQALEKF 626
++ ++ALE+F
Sbjct: 90 --EEVQKKALEEF 100
>At5g62550.1 68418.m07850 expressed protein
Length = 487
Score = 30.7 bits (66), Expect = 0.97
Identities = 28/120 (23%), Positives = 43/120 (35%)
Frame = +3
Query: 291 TEMDSSKDSEETSTQYKIPXXXXXXXXXXXXXAVDDSHKTPTATIDFDQSSVSTTELIYK 470
T M + D++ S+ + P A+ DS T T S TE +
Sbjct: 231 TAMSLNNDNDVQSS-FSTPGNSNITSEITKDDALQDSTVTKTTKEKDALQDSSVTETTKE 289
Query: 471 KETTPTVQEPTESPEKITSTSSKPLDAVHEQDLIPTSTTKTADISEQALEKFTKPDTKPS 650
K+ S E+ S + E+D + S+ EQALE T+ T+ S
Sbjct: 290 KDALQDSSVTETSKEEGALQDSSVTETTKEEDALQDSSVTETTKEEQALETVTQGRTRKS 349
>At3g57300.1 68416.m06378 transcriptional activator, putative similar
to transcriptional activator SRCAP [Homo sapiens]
GI:5106572; contains Pfam profiles PF00271: Helicase
conserved C-terminal domain, PF00176: SNF2 family
N-terminal domain
Length = 1507
Score = 30.3 bits (65), Expect = 1.3
Identities = 20/70 (28%), Positives = 29/70 (41%)
Frame = +3
Query: 390 VDDSHKTPTATIDFDQSSVSTTELIYKKETTPTVQEPTESPEKITSTSSKPLDAVHEQDL 569
V D K T I D +T E + + QEP E PEK S++ K A + +
Sbjct: 1394 VKDRQKKKTKRIRIDAEGDATLEELEDVDRQDNGQEPLEEPEKPKSSNKKRRAASNPKAR 1453
Query: 570 IPTSTTKTAD 599
P + A+
Sbjct: 1454 APQKAKEEAN 1463
>At5g55040.1 68418.m06859 DNA-binding bromodomain-containing protein
contains bromodomain, INTERPRO:IPR001487
Length = 145
Score = 29.9 bits (64), Expect = 1.7
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 6/69 (8%)
Frame = +3
Query: 27 QXTPLITEVSTHKLIPELYEKSTEPPYVEPKDQETTPYVVELEEH-----TQKSELST-I 188
+ TP++ + S ++ +L +K Y EP D E P ++ EH T + +L+
Sbjct: 41 ETTPILDKKSLELILDKLQKKDIYGVYAEPVDPEELPDYHDMIEHPMDFSTVRKKLANGS 100
Query: 189 YSTTQETTS 215
YST +E S
Sbjct: 101 YSTLEELES 109
>At3g19070.1 68416.m02422 cell wall protein-related similar to
vegetative cell wall protein gp1 [Chlamydomonas
reinhardtii] gi|12018147|gb|AAG45420;
Length = 346
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +3
Query: 399 SHKTPTATIDFDQSSVSTTELIYKKETTPTVQEPTESPEKITSTSSKPLDAVHE 560
S + P IDF +SSVS + T T P+ P ++S+S +P ++ E
Sbjct: 94 SLQPPAPLIDFFRSSVSYSHQPPSSSTLATSSSPSLQPPSMSSSSLQPPASLRE 147
>At5g52710.1 68418.m06543 heavy-metal-associated domain-containing
protein contains Pfam profile PF00403:
Heavy-metal-associated domain
Length = 451
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +2
Query: 446 FHDRTYL*KRNNSYCTRTNGISRKNHFNIEQTLRRCS*TRSNT 574
FH Y K NN Y +NG + N F T R S +RS++
Sbjct: 338 FH--AYKEKNNNPYARSSNGPTSNNEFGSSSTRNRSSFSRSSS 378
>At1g72160.1 68414.m08343 SEC14 cytosolic factor family protein /
phosphoglyceride transfer family protein similar to
GI:807956 from [Saccharomyces cerevisiae]similar to
polyphosphoinositide binding protein Ssh2p (GI:2739046)
{Glycine max}; contains Pfam PF00650 : CRAL/TRIO domain;
contains Pfam PF03765 : CRAL/TRIO, N-terminus
Length = 490
Score = 29.1 bits (62), Expect = 3.0
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 5/59 (8%)
Frame = +3
Query: 492 QEPTES----PEKITSTSSKPLDAVHE-QDLIPTSTTKTADISEQALEKFTKPDTKPSE 653
+EPT + PEK+ S S P + QD +PT T ++E + TKP E
Sbjct: 3 EEPTTTTLVTPEKLPSPSLTPSEVSESTQDALPTETETLEKVTETNPPETADTTTKPEE 61
>At5g17630.1 68418.m02067 glucose-6-phosphate/phosphate
translocator, putative similar to
glucose-6-phosphate/phosphate-translocator precursor
[Solanum tuberosum] gi|2997593|gb|AAC08526
Length = 417
Score = 28.7 bits (61), Expect = 3.9
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +3
Query: 480 TPTVQEPTESPEKITSTSSKPLDAVHEQDLIPTSTTKTADISEQALEKFTKPDT 641
T T Q+PT + T+ KP + H L P + D+S + L T P++
Sbjct: 18 TRTCQQPTRLSALLV-TNPKPFNHRHPLGLSPIPNLQIRDVSAKPLLSLTNPES 70
>At5g07880.1 68418.m00908 SNAP25 homologous protein, putative /
synaptosomal-associated protein SNAP25-like, putative
(SNAP29) identical to Swiss-Prot:Q9SD96 SNAP25
homologous protein SNAP29
(AtSNAP29)(Synaptosomal-associated protein SNAP25-like
2) [Arabidopsis thaliana]; contains Pfam profile:
PF05739 SNARE domain
Length = 251
Score = 28.3 bits (60), Expect = 5.2
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +3
Query: 471 KETTPTVQEPTESPEKITSTSSKPLDAVHEQ-DLIPTSTTKTADI 602
+ETT TVQ + E+I +SK L ++EQ D I + KT D+
Sbjct: 66 EETTKTVQGCLKVAEEIRCDASKTLVMLNEQGDQITRTHQKTVDL 110
>At3g02860.2 68416.m00279 expressed protein
Length = 313
Score = 28.3 bits (60), Expect = 5.2
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +3
Query: 522 TSTSSKPLDA-VHEQDLIPTSTTKTADISEQALEKFTKPDTKPSESPXH*TG*TDNQ 689
T+ S PL A + +S TKT +Q+ + T P+TKP + TG DN+
Sbjct: 138 TNKSKGPLPAGFFDNQKTDSSNTKTTSEPKQSQTQTTGPETKPMVNGNLPTGFFDNK 194
>At3g02860.1 68416.m00278 expressed protein
Length = 312
Score = 28.3 bits (60), Expect = 5.2
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +3
Query: 522 TSTSSKPLDA-VHEQDLIPTSTTKTADISEQALEKFTKPDTKPSESPXH*TG*TDNQ 689
T+ S PL A + +S TKT +Q+ + T P+TKP + TG DN+
Sbjct: 137 TNKSKGPLPAGFFDNQKTDSSNTKTTSEPKQSQTQTTGPETKPMVNGNLPTGFFDNK 193
>At1g09730.1 68414.m01092 Ulp1 protease family protein low similarity
to SP|Q9GZR1 SUMO-1-specific protease 1 (EC 3.4.22.-)
(Sentrin-specific protease SENP6) (Protease FKSG6) {Homo
sapiens}; contains Pfam profile PF02902: Ulp1 protease
family, C-terminal catalytic domain
Length = 984
Score = 27.9 bits (59), Expect = 6.8
Identities = 17/85 (20%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Frame = +3
Query: 408 TPTATIDFDQSSVSTTELIYKKETTPTVQEPTESP-EKITSTSSKPLDAVHEQDLIPTST 584
+P A+ F ++ L+ K++ T + E + S + I P++ HE+++ +
Sbjct: 829 SPRASNSFSSWNLGIP-LVQKEDETDLLSETSNSSNDSIGIIEDNPIENTHEEEIDESPP 887
Query: 585 TKTADISEQALEKFTKPDTKPSESP 659
+T + + T T +E P
Sbjct: 888 RETVSLKSATVGSNTADHTTENEEP 912
>At5g54120.1 68418.m06738 expressed protein
Length = 192
Score = 27.5 bits (58), Expect = 9.0
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = -3
Query: 500 WFLYSRSCFFFIDKFCRGNTTLIKIY 423
W LY RS + +F GN L+ +Y
Sbjct: 67 WLLYERSSIICLQEFWVGNEELVNLY 92
>At5g51850.1 68418.m06428 expressed protein similar to unknown
protein (emb|CAB81354.1)
Length = 590
Score = 27.5 bits (58), Expect = 9.0
Identities = 19/94 (20%), Positives = 35/94 (37%), Gaps = 3/94 (3%)
Frame = +3
Query: 393 DDSHKTPTATIDFDQSSVSTTELIYKKETTPTVQEPTESPEKITSTSSKPLDAVHEQDL- 569
+ +K T+ SS +I K + TP + +S ++ KP++ + +
Sbjct: 266 EKENKQSTSHKPNSSSSSRPEPIIQKPKPTPVILGEKQSQNRVKQRQLKPINLCKKAETE 325
Query: 570 --IPTSTTKTADISEQALEKFTKPDTKPSESPXH 665
P + T+DI + E F P H
Sbjct: 326 TRRPIKPSPTSDIRNRKRETFLSDSRDVKAKPLH 359
>At5g46250.2 68418.m05694 RNA recognition motif (RRM)-containing
protein contains similarity to RNA-binding protein;
contains InterPro entry IPR000504: RNA-binding region
RNP-1 (RNA recognition motif) (RRM)
Length = 420
Score = 27.5 bits (58), Expect = 9.0
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = +3
Query: 468 KKETTPTVQE--PTESPEKITSTSSKPLDAVHEQDLIPTSTTKTADISEQALEKFTKPDT 641
+K +P++ + P +PE T+ S+P +HE D P T + D+ E P+
Sbjct: 10 EKMESPSISDAVPLHAPEDATADFSQPQSPLHEVDSFPV-TESSDDVVVNVSE---IPNL 65
Query: 642 KPSE 653
PS+
Sbjct: 66 SPSD 69
>At5g46250.1 68418.m05693 RNA recognition motif (RRM)-containing
protein contains similarity to RNA-binding protein;
contains InterPro entry IPR000504: RNA-binding region
RNP-1 (RNA recognition motif) (RRM)
Length = 422
Score = 27.5 bits (58), Expect = 9.0
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = +3
Query: 468 KKETTPTVQE--PTESPEKITSTSSKPLDAVHEQDLIPTSTTKTADISEQALEKFTKPDT 641
+K +P++ + P +PE T+ S+P +HE D P T + D+ E P+
Sbjct: 10 EKMESPSISDAVPLHAPEDATADFSQPQSPLHEVDSFPV-TESSDDVVVNVSE---IPNL 65
Query: 642 KPSE 653
PS+
Sbjct: 66 SPSD 69
>At4g16170.1 68417.m02455 expressed protein
Length = 429
Score = 27.5 bits (58), Expect = 9.0
Identities = 17/53 (32%), Positives = 23/53 (43%)
Frame = +3
Query: 405 KTPTATIDFDQSSVSTTELIYKKETTPTVQEPTESPEKITSTSSKPLDAVHEQ 563
KTP D+ + + TEL +K T P P ++ K LD V EQ
Sbjct: 288 KTPLGEPVKDKKNKTKTELWVEKFYKKTTTLPEPFPHELVERLEKYLDTVEEQ 340
>At3g05740.1 68416.m00644 DNA helicase (RECQI1) identical to DNA
Helicase [Arabidopsis thaliana] GI:10944747
Length = 606
Score = 27.5 bits (58), Expect = 9.0
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 276 KEQHPTEMDSSKDSEETSTQYKIP 347
K+ E+DSS D E+ T++K+P
Sbjct: 122 KKPEIVELDSSSDLEDVETRFKVP 145
>At2g29070.2 68415.m03533 ubiquitin fusion degradation UFD1 family
protein similar to SP|P70362 Ubiquitin fusion
degradation protein 1 homolog (UB fusion protein 1) {Mus
musculus}; contains Pfam profile PF03152: Ubiquitin
fusion degradation protein UFD1
Length = 312
Score = 27.5 bits (58), Expect = 9.0
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 8/82 (9%)
Frame = +3
Query: 438 SSVSTTELIYKKETTPTV--QEPTESPEKITSTSSKPLDAVHEQD---LIPTSTTKTAD- 599
S+VS E + + P + +EP E P+K+T ++ +PL E++ +P T T
Sbjct: 163 SAVSIIETDCEVDFAPPLDYKEP-EKPQKLTPSNKRPLQVKEEEEPASKVPKFTPFTGSG 221
Query: 600 --ISEQALEKFTKPDTKPSESP 659
+ +A + DTK E P
Sbjct: 222 KRLDGKAQTQTEPEDTKQQEKP 243
>At2g29070.1 68415.m03534 ubiquitin fusion degradation UFD1 family
protein similar to SP|P70362 Ubiquitin fusion
degradation protein 1 homolog (UB fusion protein 1) {Mus
musculus}; contains Pfam profile PF03152: Ubiquitin
fusion degradation protein UFD1
Length = 280
Score = 27.5 bits (58), Expect = 9.0
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 8/82 (9%)
Frame = +3
Query: 438 SSVSTTELIYKKETTPTV--QEPTESPEKITSTSSKPLDAVHEQD---LIPTSTTKTAD- 599
S+VS E + + P + +EP E P+K+T ++ +PL E++ +P T T
Sbjct: 131 SAVSIIETDCEVDFAPPLDYKEP-EKPQKLTPSNKRPLQVKEEEEPASKVPKFTPFTGSG 189
Query: 600 --ISEQALEKFTKPDTKPSESP 659
+ +A + DTK E P
Sbjct: 190 KRLDGKAQTQTEPEDTKQQEKP 211
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,660,481
Number of Sequences: 28952
Number of extensions: 260790
Number of successful extensions: 948
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 915
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 947
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1496852856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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