SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0913
         (600 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC002457-1|AAH02457.1|  251|Homo sapiens Der1-like domain family...   174   2e-43
AY358818-1|AAQ89177.1|  251|Homo sapiens SDIG243 protein.             174   2e-43
CR457202-1|CAG33483.1|  239|Homo sapiens F-LANa protein.               76   1e-13
BC010890-1|AAH10890.1|  239|Homo sapiens Der1-like domain family...    76   1e-13
AF242523-1|AAF99603.1|  239|Homo sapiens hypothetical transmembr...    76   1e-13
AF208065-1|AAL14869.1|  239|Homo sapiens F-LANa protein.               76   1e-13
AF132289-1|AAG43049.1|  239|Homo sapiens F-LAN-1 protein.              76   1e-13
CR456372-1|CAG30258.1|  239|Homo sapiens Em:AP000350.1 protein.        74   3e-13
BC057830-1|AAH57830.1|  235|Homo sapiens Der1-like domain family...    74   3e-13
AB049213-1|BAB68409.1|  233|Homo sapiens putative NADH oxidoredu...    74   3e-13
AF151859-1|AAD34096.1|  209|Homo sapiens CGI-101 protein protein.      73   1e-12

>BC002457-1|AAH02457.1|  251|Homo sapiens Der1-like domain family,
           member 1 protein.
          Length = 251

 Score =  174 bits (423), Expect = 2e-43
 Identities = 73/132 (55%), Positives = 92/132 (69%)
 Frame = +1

Query: 205 MSEFRDWYNGVPFFTRYWMTFTIVLSLFGKFGLVSPYYFILDFYYFFNQFQIWRPLTALF 384
           MS+  DW+  +P  TRYW   T+ + L GK GL+SP Y  L    F  +FQIWRP+TA F
Sbjct: 1   MSDIGDWFRSIPAITRYWFAATVAVPLVGKLGLISPAYLFLWPEAFLYRFQIWRPITATF 60

Query: 385 YYPINPGTGFHFLINCYFLYNYSQRLETGMFAGKPADYFYMLLFNWVCCVIIGLLAKLPI 564
           Y+P+ PGTGF +L+N YFLY YS RLETG F G+PADY +MLLFNW+C VI GL   + +
Sbjct: 61  YFPVGPGTGFLYLVNLYFLYQYSTRLETGAFDGRPADYLFMLLFNWICIVITGLAMDMQL 120

Query: 565 LMDPMALSALYV 600
           LM P+ +S LYV
Sbjct: 121 LMIPLIMSVLYV 132


>AY358818-1|AAQ89177.1|  251|Homo sapiens SDIG243 protein.
          Length = 251

 Score =  174 bits (423), Expect = 2e-43
 Identities = 73/132 (55%), Positives = 92/132 (69%)
 Frame = +1

Query: 205 MSEFRDWYNGVPFFTRYWMTFTIVLSLFGKFGLVSPYYFILDFYYFFNQFQIWRPLTALF 384
           MS+  DW+  +P  TRYW   T+ + L GK GL+SP Y  L    F  +FQIWRP+TA F
Sbjct: 1   MSDIGDWFRSIPAITRYWFAATVAVPLVGKLGLISPAYLFLWPEAFLYRFQIWRPITATF 60

Query: 385 YYPINPGTGFHFLINCYFLYNYSQRLETGMFAGKPADYFYMLLFNWVCCVIIGLLAKLPI 564
           Y+P+ PGTGF +L+N YFLY YS RLETG F G+PADY +MLLFNW+C VI GL   + +
Sbjct: 61  YFPVGPGTGFLYLVNLYFLYQYSTRLETGAFDGRPADYLFMLLFNWICIVITGLAMDMQL 120

Query: 565 LMDPMALSALYV 600
           LM P+ +S LYV
Sbjct: 121 LMIPLIMSVLYV 132


>CR457202-1|CAG33483.1|  239|Homo sapiens F-LANa protein.
          Length = 239

 Score = 75.8 bits (178), Expect = 1e-13
 Identities = 41/126 (32%), Positives = 63/126 (50%), Gaps = 1/126 (0%)
 Frame = +1

Query: 226 YNGVPFFTRYWMTFTIVLSLFGKFGLVSPYYFILDFYYFFNQFQIWRPLTA-LFYYPINP 402
           Y  +P  +R + T  ++ +   +  L++P+    +    F  FQIWR +T  LF+ P+  
Sbjct: 10  YLQIPPVSRAYTTACVLTTAAVQLELITPFQLYFNPELIFKHFQIWRLITNFLFFGPV-- 67

Query: 403 GTGFHFLINCYFLYNYSQRLETGMFAGKPADYFYMLLFNWVCCVIIGLLAKLPILMDPMA 582
             GF+FL N  FLY Y + LE G F G+ AD+ +M LF      + GL   L  L     
Sbjct: 68  --GFNFLFNMIFLYRYCRMLEEGSFRGRTADFVFMFLFGGFLMTLFGLFVSLVFLGQAFT 125

Query: 583 LSALYV 600
           +  +YV
Sbjct: 126 IMLVYV 131


>BC010890-1|AAH10890.1|  239|Homo sapiens Der1-like domain family,
           member 2 protein.
          Length = 239

 Score = 75.8 bits (178), Expect = 1e-13
 Identities = 41/126 (32%), Positives = 63/126 (50%), Gaps = 1/126 (0%)
 Frame = +1

Query: 226 YNGVPFFTRYWMTFTIVLSLFGKFGLVSPYYFILDFYYFFNQFQIWRPLTA-LFYYPINP 402
           Y  +P  +R + T  ++ +   +  L++P+    +    F  FQIWR +T  LF+ P+  
Sbjct: 10  YLQIPPVSRAYTTACVLTTAAVQLELITPFQLYFNPELIFKHFQIWRLITNFLFFGPV-- 67

Query: 403 GTGFHFLINCYFLYNYSQRLETGMFAGKPADYFYMLLFNWVCCVIIGLLAKLPILMDPMA 582
             GF+FL N  FLY Y + LE G F G+ AD+ +M LF      + GL   L  L     
Sbjct: 68  --GFNFLFNMIFLYRYCRMLEEGSFRGRTADFVFMFLFGGFLMTLFGLFVSLVFLGQAFT 125

Query: 583 LSALYV 600
           +  +YV
Sbjct: 126 IMLVYV 131


>AF242523-1|AAF99603.1|  239|Homo sapiens hypothetical transmembrane
           protein SBBI53 protein.
          Length = 239

 Score = 75.8 bits (178), Expect = 1e-13
 Identities = 41/126 (32%), Positives = 63/126 (50%), Gaps = 1/126 (0%)
 Frame = +1

Query: 226 YNGVPFFTRYWMTFTIVLSLFGKFGLVSPYYFILDFYYFFNQFQIWRPLTA-LFYYPINP 402
           Y  +P  +R + T  ++ +   +  L++P+    +    F  FQIWR +T  LF+ P+  
Sbjct: 10  YLQIPPVSRAYTTACVLTTAAVQLELITPFQLYFNPELIFKHFQIWRLITNFLFFGPV-- 67

Query: 403 GTGFHFLINCYFLYNYSQRLETGMFAGKPADYFYMLLFNWVCCVIIGLLAKLPILMDPMA 582
             GF+FL N  FLY Y + LE G F G+ AD+ +M LF      + GL   L  L     
Sbjct: 68  --GFNFLFNMIFLYRYCRMLEEGSFRGRTADFVFMFLFGGFLMTLFGLFVSLVFLGQAFT 125

Query: 583 LSALYV 600
           +  +YV
Sbjct: 126 IMLVYV 131


>AF208065-1|AAL14869.1|  239|Homo sapiens F-LANa protein.
          Length = 239

 Score = 75.8 bits (178), Expect = 1e-13
 Identities = 41/126 (32%), Positives = 63/126 (50%), Gaps = 1/126 (0%)
 Frame = +1

Query: 226 YNGVPFFTRYWMTFTIVLSLFGKFGLVSPYYFILDFYYFFNQFQIWRPLTA-LFYYPINP 402
           Y  +P  +R + T  ++ +   +  L++P+    +    F  FQIWR +T  LF+ P+  
Sbjct: 10  YLQIPPVSRAYTTACVLTTAAVQLELITPFQLYFNPELIFKHFQIWRLITNFLFFGPV-- 67

Query: 403 GTGFHFLINCYFLYNYSQRLETGMFAGKPADYFYMLLFNWVCCVIIGLLAKLPILMDPMA 582
             GF+FL N  FLY Y + LE G F G+ AD+ +M LF      + GL   L  L     
Sbjct: 68  --GFNFLFNMIFLYRYCRMLEEGSFRGRTADFVFMFLFGGFLMTLFGLFVSLVFLGQAFT 125

Query: 583 LSALYV 600
           +  +YV
Sbjct: 126 IMLVYV 131


>AF132289-1|AAG43049.1|  239|Homo sapiens F-LAN-1 protein.
          Length = 239

 Score = 75.8 bits (178), Expect = 1e-13
 Identities = 41/126 (32%), Positives = 63/126 (50%), Gaps = 1/126 (0%)
 Frame = +1

Query: 226 YNGVPFFTRYWMTFTIVLSLFGKFGLVSPYYFILDFYYFFNQFQIWRPLTA-LFYYPINP 402
           Y  +P  +R + T  ++ +   +  L++P+    +    F  FQIWR +T  LF+ P+  
Sbjct: 10  YLQIPPVSRAYTTACVLTTAAVQLELITPFQLYFNPELIFKHFQIWRLITNFLFFGPV-- 67

Query: 403 GTGFHFLINCYFLYNYSQRLETGMFAGKPADYFYMLLFNWVCCVIIGLLAKLPILMDPMA 582
             GF+FL N  FLY Y + LE G F G+ AD+ +M LF      + GL   L  L     
Sbjct: 68  --GFNFLFNMIFLYRYCRMLEEGSFRGRTADFVFMFLFGGFLMTLFGLFVSLVFLGQAFT 125

Query: 583 LSALYV 600
           +  +YV
Sbjct: 126 IMLVYV 131


>CR456372-1|CAG30258.1|  239|Homo sapiens Em:AP000350.1 protein.
          Length = 239

 Score = 74.1 bits (174), Expect = 3e-13
 Identities = 40/123 (32%), Positives = 64/123 (52%), Gaps = 1/123 (0%)
 Frame = +1

Query: 235 VPFFTRYWMTFTIVLSLFGKFGLVSPYYFILDFYYFFNQFQIWRPLTA-LFYYPINPGTG 411
           VP  TR +    ++ +   +  L+SP+    + +  F +FQ+WR +T  LF+ P+    G
Sbjct: 13  VPAVTRAYTAACVLTTAAVQLELLSPFQLYFNPHLVFRKFQVWRLVTNFLFFGPL----G 68

Query: 412 FHFLINCYFLYNYSQRLETGMFAGKPADYFYMLLFNWVCCVIIGLLAKLPILMDPMALSA 591
           F F  N  F++ Y + LE G F G+ AD+ +M LF  V   ++GLL  L  L   +    
Sbjct: 69  FSFFFNMLFVFRYCRMLEEGSFRGRTADFVFMFLFGGVLMTLLGLLGSLFFLGQALMAML 128

Query: 592 LYV 600
           +YV
Sbjct: 129 VYV 131


>BC057830-1|AAH57830.1|  235|Homo sapiens Der1-like domain family,
           member 3 protein.
          Length = 235

 Score = 74.1 bits (174), Expect = 3e-13
 Identities = 40/123 (32%), Positives = 64/123 (52%), Gaps = 1/123 (0%)
 Frame = +1

Query: 235 VPFFTRYWMTFTIVLSLFGKFGLVSPYYFILDFYYFFNQFQIWRPLTA-LFYYPINPGTG 411
           VP  TR +    ++ +   +  L+SP+    + +  F +FQ+WR +T  LF+ P+    G
Sbjct: 13  VPAVTRAYTAACVLTTAAVQLELLSPFQLYFNPHLVFRKFQVWRLVTNFLFFGPL----G 68

Query: 412 FHFLINCYFLYNYSQRLETGMFAGKPADYFYMLLFNWVCCVIIGLLAKLPILMDPMALSA 591
           F F  N  F++ Y + LE G F G+ AD+ +M LF  V   ++GLL  L  L   +    
Sbjct: 69  FSFFFNMLFVFRYCRMLEEGSFRGRTADFVFMFLFGGVLMTLLGLLGSLFFLGQALMAML 128

Query: 592 LYV 600
           +YV
Sbjct: 129 VYV 131


>AB049213-1|BAB68409.1|  233|Homo sapiens putative NADH
           oxidoreductase complex I subunit homolog. protein.
          Length = 233

 Score = 74.1 bits (174), Expect = 3e-13
 Identities = 40/123 (32%), Positives = 64/123 (52%), Gaps = 1/123 (0%)
 Frame = +1

Query: 235 VPFFTRYWMTFTIVLSLFGKFGLVSPYYFILDFYYFFNQFQIWRPLTA-LFYYPINPGTG 411
           VP  TR +    ++ +   +  L+SP+    + +  F +FQ+WR +T  LF+ P+    G
Sbjct: 13  VPAVTRAYTAACVLTTAAVQLELLSPFQLYFNPHLVFRKFQVWRLVTNFLFFGPL----G 68

Query: 412 FHFLINCYFLYNYSQRLETGMFAGKPADYFYMLLFNWVCCVIIGLLAKLPILMDPMALSA 591
           F F  N  F++ Y + LE G F G+ AD+ +M LF  V   ++GLL  L  L   +    
Sbjct: 69  FSFFFNMLFVFRYCRMLEEGSFRGRTADFVFMFLFGGVLMTLLGLLGSLFFLGQALMAML 128

Query: 592 LYV 600
           +YV
Sbjct: 129 VYV 131


>AF151859-1|AAD34096.1|  209|Homo sapiens CGI-101 protein protein.
          Length = 209

 Score = 72.5 bits (170), Expect = 1e-12
 Identities = 39/115 (33%), Positives = 59/115 (51%), Gaps = 1/115 (0%)
 Frame = +1

Query: 226 YNGVPFFTRYWMTFTIVLSLFGKFGLVSPYYFILDFYYFFNQFQIWRPLTA-LFYYPINP 402
           Y  +P  +R + T  ++ +   +  L++P+    +    F  FQIWR +T  LF+ P+  
Sbjct: 10  YLQIPPVSRAYTTACVLTTAAVQLELITPFQLYFNPELIFKHFQIWRLITNFLFFGPV-- 67

Query: 403 GTGFHFLINCYFLYNYSQRLETGMFAGKPADYFYMLLFNWVCCVIIGLLAKLPIL 567
             GF+FL N  FLY Y + LE G F G+ AD+ +M LF      + GL   L  L
Sbjct: 68  --GFNFLFNMIFLYRYCRMLEEGSFRGRTADFVFMFLFGGFLMTLFGLFVSLVFL 120


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,220,646
Number of Sequences: 237096
Number of extensions: 1940767
Number of successful extensions: 3487
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3390
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3478
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6297951520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -