Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0911
         (600 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    63   2e-12
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    23   2.0  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    23   2.0  
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    22   4.6  
AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...    21   6.0  
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...    21   6.0  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   7.9  

>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 62.9 bits (146), Expect = 2e-12
 Identities = 32/75 (42%), Positives = 45/75 (60%)
 Frame = +3

Query: 327 EVTVSGVEVHNPIQYFEEAXFPDYVQXGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVAQT 506
           EV V+G +   PI  FE +    ++   VK  GY +PT IQ    P+ +SG++L   AQT
Sbjct: 145 EVKVTGNDAPPPITSFETSGLRPHLLENVKKSGYTKPTAIQKYAIPVILSGRDLMSCAQT 204

Query: 507 GSGKTLDYILPAIVH 551
           GSGKT  ++LP I+H
Sbjct: 205 GSGKTAAFMLP-IIH 218


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 523 NVFPEPVWATPXKFFPD 473
           NVFP+P    P +F P+
Sbjct: 399 NVFPDPEKFDPDRFLPE 415


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 523 NVFPEPVWATPXKFFPD 473
           NVFP+P    P +F P+
Sbjct: 399 NVFPDPEKFDPDRFLPE 415


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +1

Query: 130 GLATVAIDLEDLEALVGKKNSLEGXTCDA 216
           G+   +I+ +DL A  G KN+L     DA
Sbjct: 345 GVMIWSIETDDLHATCGTKNALLHAVNDA 373


>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 10/53 (18%), Positives = 23/53 (43%)
 Frame = -2

Query: 176 TKASRSSKSIATVAKPRRIIAEFVASSKFGTTVSTAIIPITRHDYFSDLVEDV 18
           T+  R+ +++++  +    I        + TT++ A       DYF   ++ V
Sbjct: 93  TQCERAKRTLSSATQASIEIDSLFDGIDYSTTITRARFEDINMDYFKKCIDPV 145


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 10/53 (18%), Positives = 23/53 (43%)
 Frame = -2

Query: 176 TKASRSSKSIATVAKPRRIIAEFVASSKFGTTVSTAIIPITRHDYFSDLVEDV 18
           T+  R+ +++++  +    I        + TT++ A       DYF   ++ V
Sbjct: 93  TQCERAKRTLSSATQASIEIDSLFDGIDYSTTITRARFEDINMDYFKKCIDPV 145


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory
          receptor candidate 50 protein.
          Length = 350

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -2

Query: 71 AIIPITRHDYFSDLVEDVYL 12
          A++P+ +H     LV  VYL
Sbjct: 18 ALLPVKKHHRLEKLVPCVYL 37


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,437
Number of Sequences: 336
Number of extensions: 2816
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15143945
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)