Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0911
(600 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 105 2e-23
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 73 2e-13
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 71 7e-13
SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17) 68 5e-12
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 2e-10
SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 2e-10
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41) 60 1e-09
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 1e-09
SB_52320| Best HMM Match : DEAD (HMM E-Value=0) 56 3e-08
SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19) 54 7e-08
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 5e-07
SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07) 49 3e-06
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22) 49 3e-06
SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057) 48 6e-06
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 46 2e-05
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 46 2e-05
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 5e-05
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 7e-05
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 42 3e-04
SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27) 42 4e-04
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 42 5e-04
SB_32980| Best HMM Match : DEAD (HMM E-Value=0) 37 0.011
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 36 0.033
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 34 0.076
SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.10
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.54
SB_51441| Best HMM Match : DEAD (HMM E-Value=4.9e-19) 31 0.94
SB_49218| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_5719| Best HMM Match : Helicase_C (HMM E-Value=1e-24) 30 1.6
SB_3046| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_6554| Best HMM Match : Isy1 (HMM E-Value=0) 28 5.0
SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27) 28 6.6
SB_52637| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0) 27 8.8
SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42) 27 8.8
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 105 bits (253), Expect = 2e-23
Identities = 45/113 (39%), Positives = 70/113 (61%)
Frame = +3
Query: 216 PDWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEAXFPD 395
P+ + +PFNKNFY+ HP + K+S E+++ R K + VSG P F F +
Sbjct: 467 PEKSKIDYKPFNKNFYEEHPEITKQSKQEIDDLRKKMGIKVSGAMPARPCISFAHFGFDE 526
Query: 396 YVQXGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVAQTGSGKTLDYILPAIVHI 554
+ ++ + Y +PT IQ Q PIA+SG+++ G+A+TGSGKT ++ PA+VHI
Sbjct: 527 QMMASIRKLEYTQPTQIQCQALPIALSGRDIIGIAKTGSGKTAAFLWPALVHI 579
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 72.5 bits (170), Expect = 2e-13
Identities = 32/81 (39%), Positives = 50/81 (61%)
Frame = +3
Query: 312 YRNKHEVTVSGVEVHNPIQYFEEAXFPDYVQXGVKTMGYKEPTPIQAQGWPIAMSGKNLX 491
+R ++ G + PI+ ++EA PD + V +GYK+PTPIQ Q PI + +++
Sbjct: 83 FREDFNISTKGGRIPFPIRKWKEAQIPDSILEIVDKLGYKDPTPIQRQAIPIGLQNRDII 142
Query: 492 GVAQTGSGKTLDYILPAIVHI 554
GVA+TGSGKT + +P +V I
Sbjct: 143 GVAETGSGKTAAFAIPLLVWI 163
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 70.9 bits (166), Expect = 7e-13
Identities = 35/98 (35%), Positives = 55/98 (56%)
Frame = +3
Query: 246 FNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEAXFPDYVQXGVKTMG 425
F ++YD + V + S V+E R K+ + + G + PI+ F + P + +
Sbjct: 32 FMWSYYDENEKVSRLSDEVVDEIRWKNGIHIEGEDCPKPIESFHDLNLPPELSTYLAKKN 91
Query: 426 YKEPTPIQAQGWPIAMSGKNLXGVAQTGSGKTLDYILP 539
++ PTPIQ Q MSG+++ G+A+TGSGKTL Y LP
Sbjct: 92 FQVPTPIQMQSLSCVMSGRDIIGLAETGSGKTLAYSLP 129
>SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)
Length = 500
Score = 68.1 bits (159), Expect = 5e-12
Identities = 32/88 (36%), Positives = 49/88 (55%)
Frame = +3
Query: 261 YDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEAXFPDYVQXGVKTMGYKEPT 440
Y HPT+ + +V++ R+K E+ V G V +P+ F F + + + GY PT
Sbjct: 161 YKEHPTIAALTAEQVKQLRDKMEIKVKGEHVVSPVLEFFHCSFNESLSKNLSNHGYHSPT 220
Query: 441 PIQAQGWPIAMSGKNLXGVAQTGSGKTL 524
PIQ Q P+ +SG+++ A TGSGK L
Sbjct: 221 PIQMQVLPVLLSGRDVMVCASTGSGKLL 248
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 62.9 bits (146), Expect = 2e-10
Identities = 29/73 (39%), Positives = 40/73 (54%)
Frame = +3
Query: 336 VSGVEVHNPIQYFEEAXFPDYVQXGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVAQTGSG 515
VSG I F E F + + + GY+ PTP+Q PI M+G++L AQTGSG
Sbjct: 469 VSGENQPPKITSFNELPFGEQLMANISRAGYRRPTPVQKAALPIVMAGRDLMACAQTGSG 528
Query: 516 KTLDYILPAIVHI 554
KT Y+LP + +
Sbjct: 529 KTAAYMLPVLTSL 541
>SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 62.9 bits (146), Expect = 2e-10
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 1/97 (1%)
Frame = +3
Query: 219 DWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHE-VTVSGVEVHNPIQYFEEAXFPD 395
D +V QPF K+FY P + K +P E +E+R E + V G P++ + +
Sbjct: 55 DHKTVVYQPFRKDFYVEVPELAKMTPEETDEFRLSLENIHVRGKNAPKPVKTWAQTGVQL 114
Query: 396 YVQXGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVAQT 506
+ +K Y++PTPIQAQ P+ MSG+++ + T
Sbjct: 115 KILDVLKKNSYEKPTPIQAQAIPVIMSGRDMIAIVMT 151
>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
Length = 690
Score = 60.5 bits (140), Expect = 1e-09
Identities = 27/56 (48%), Positives = 36/56 (64%)
Frame = +3
Query: 288 RSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEAXFPDYVQXGVKTMGYKEPTPIQAQ 455
R +EV+ YR ++TV+G V P+ FEE+ FPDY+Q K G+ EPT IQAQ
Sbjct: 57 RGQHEVDAYRRSKDLTVNGRNVPKPVTTFEESAFPDYIQSYFKREGFTEPTMIQAQ 112
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 60.1 bits (139), Expect = 1e-09
Identities = 32/80 (40%), Positives = 47/80 (58%)
Frame = +3
Query: 306 EEYRNKHEVTVSGVEVHNPIQYFEEAXFPDYVQXGVKTMGYKEPTPIQAQGWPIAMSGKN 485
E+Y ++ EV VSG I FEEA + V+ YK+PTP+Q PI ++G++
Sbjct: 692 EKY-DQIEVLVSGNNPVRHINSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRD 750
Query: 486 LXGVAQTGSGKTLDYILPAI 545
+ AQTGSGKT ++LP +
Sbjct: 751 VMACAQTGSGKTAAFLLPVM 770
>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
Length = 340
Score = 55.6 bits (128), Expect = 3e-08
Identities = 24/61 (39%), Positives = 38/61 (62%)
Frame = +3
Query: 363 IQYFEEAXFPDYVQXGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVAQTGSGKTLDYILPA 542
++ F + G+ G+ PT IQ QG P+A+SG+++ G A+TGSGKTL +++P
Sbjct: 49 VEKFSDFPISKRTLDGLMKAGFVTPTDIQKQGIPVALSGRDVLGAAKTGSGKTLAFLIPI 108
Query: 543 I 545
I
Sbjct: 109 I 109
>SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19)
Length = 185
Score = 54.4 bits (125), Expect = 7e-08
Identities = 30/72 (41%), Positives = 42/72 (58%)
Frame = +3
Query: 306 EEYRNKHEVTVSGVEVHNPIQYFEEAXFPDYVQXGVKTMGYKEPTPIQAQGWPIAMSGKN 485
E+Y ++ EV VSG I FEEA + V+ YK+PTP+Q PI ++G++
Sbjct: 115 EKY-DQIEVLVSGNNPVRHINSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRD 173
Query: 486 LXGVAQTGSGKT 521
+ AQTGSGKT
Sbjct: 174 VMACAQTGSGKT 185
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 51.6 bits (118), Expect = 5e-07
Identities = 24/64 (37%), Positives = 35/64 (54%)
Frame = +3
Query: 363 IQYFEEAXFPDYVQXGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVAQTGSGKTLDYILPA 542
I FE+ + + V GYK+PTP+Q PI ++L AQTGSGKT +++P
Sbjct: 874 ILQFEDVDLGEILLHNVGLAGYKKPTPVQKYAIPIVKGKRDLMACAQTGSGKTAAFLIPI 933
Query: 543 IVHI 554
+ I
Sbjct: 934 LSRI 937
>SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07)
Length = 456
Score = 49.2 bits (112), Expect = 3e-06
Identities = 29/84 (34%), Positives = 41/84 (48%)
Frame = +3
Query: 327 EVTVSGVEVHNPIQYFEEAXFPDYVQXGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVAQT 506
EV + G P + F +Y G + +G PT +Q WP + G+++ GVA
Sbjct: 178 EVLIQGESAPRPFLTMNNSTFYEY---GPR-LGVTVPTSLQKHMWPSLLRGRDVAGVAIE 233
Query: 507 GSGKTLDYILPAIVHIN*PTGYSE 578
GSGK L Y+LP I I + Y E
Sbjct: 234 GSGKRLAYLLPIIHQITESSVYQE 257
>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
Length = 1058
Score = 48.8 bits (111), Expect = 3e-06
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Frame = +3
Query: 300 EVEEYRNKHEVTVSGVEVHNPIQYF----EEAXFPDYVQXGVKTMGYKEPTPIQAQGWPI 467
++ +R++ + V G +V +P++ F E FPDY+ V+ GY PTPIQ Q P+
Sbjct: 137 KINLFRHEQHIYVKGADVPDPVETFSQLIERYGFPDYIIHNVQERGYTTPTPIQMQATPL 196
Query: 468 AMSGKNLXG 494
G G
Sbjct: 197 MAHGPKKSG 205
>SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057)
Length = 96
Score = 48.0 bits (109), Expect = 6e-06
Identities = 20/45 (44%), Positives = 30/45 (66%)
Frame = +3
Query: 411 VKTMGYKEPTPIQAQGWPIAMSGKNLXGVAQTGSGKTLDYILPAI 545
V +G+ PTPIQA P+A+ GK++ A TG+GKT ++LP +
Sbjct: 25 VNELGFLHPTPIQASTIPVALMGKDVCACAATGTGKTAAFMLPIL 69
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 46.4 bits (105), Expect = 2e-05
Identities = 18/58 (31%), Positives = 36/58 (62%)
Frame = +3
Query: 372 FEEAXFPDYVQXGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVAQTGSGKTLDYILPAI 545
FE+ + G+ G+ +P+PIQ + P+A++G+++ A+ G+GKT Y++P +
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAKNGTGKTAAYLVPLL 106
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 46.4 bits (105), Expect = 2e-05
Identities = 18/58 (31%), Positives = 36/58 (62%)
Frame = +3
Query: 372 FEEAXFPDYVQXGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVAQTGSGKTLDYILPAI 545
FE+ + G+ G+ +P+PIQ + P+A++G+++ A+ G+GKT Y++P +
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAKNGTGKTAAYLVPLL 106
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 44.8 bits (101), Expect = 5e-05
Identities = 19/46 (41%), Positives = 30/46 (65%)
Frame = +3
Query: 408 GVKTMGYKEPTPIQAQGWPIAMSGKNLXGVAQTGSGKTLDYILPAI 545
G+K MG+ T IQ + + G++L G A+TGSGKTL +++P +
Sbjct: 586 GIKDMGFTTMTEIQHKSIAPLLKGRDLLGAAKTGSGKTLAFLVPVV 631
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 44.4 bits (100), Expect = 7e-05
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Frame = +3
Query: 390 PDYVQXGVKTMGYKEPTPIQAQGWPIAMS-GKNLXGVAQTGSGKTLDYILPAIVHI 554
PD ++ + G+ +PTPIQ+ P A+ +++ G A+TGSGKTL + +P I HI
Sbjct: 139 PDILR-ALGDQGFSKPTPIQSLSIPPALLYHRDIIGAAETGSGKTLAFGIPIIQHI 193
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 42.3 bits (95), Expect = 3e-04
Identities = 24/84 (28%), Positives = 45/84 (53%), Gaps = 5/84 (5%)
Frame = +3
Query: 321 KHEVTVSGVEVHNPI---QYFEEAXFPDYVQXGVKTMGYKEPTPIQAQGWPIAMSGK--N 485
KHEV V + +P+ + FEE ++ GV MG+ +P+ IQ P+ ++ N
Sbjct: 85 KHEVEVLRSDPSSPLYSAKSFEELPLSANLRRGVYDMGFNKPSKIQETALPMLLADPPVN 144
Query: 486 LXGVAQTGSGKTLDYILPAIVHIN 557
+ +Q+G+GKT ++L + ++
Sbjct: 145 MIAQSQSGTGKTAAFVLTMLSRVD 168
>SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)
Length = 559
Score = 41.9 bits (94), Expect = 4e-04
Identities = 18/45 (40%), Positives = 30/45 (66%)
Frame = +3
Query: 411 VKTMGYKEPTPIQAQGWPIAMSGKNLXGVAQTGSGKTLDYILPAI 545
+K MG +P PIQ + P S K+L ++TG+GK+L ++LP++
Sbjct: 175 LKKMGITKPVPIQEKALPSVFSHKSLLIKSETGTGKSLVFLLPSV 219
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 41.5 bits (93), Expect = 5e-04
Identities = 19/42 (45%), Positives = 26/42 (61%)
Frame = +3
Query: 420 MGYKEPTPIQAQGWPIAMSGKNLXGVAQTGSGKTLDYILPAI 545
MG K+PT IQ P + G++ G A+TGSGKT + LP +
Sbjct: 25 MGIKKPTEIQLNCVPPILQGRDCIGCAKTGSGKTAAFALPIL 66
>SB_32980| Best HMM Match : DEAD (HMM E-Value=0)
Length = 985
Score = 37.1 bits (82), Expect = 0.011
Identities = 15/49 (30%), Positives = 31/49 (63%)
Frame = +3
Query: 408 GVKTMGYKEPTPIQAQGWPIAMSGKNLXGVAQTGSGKTLDYILPAIVHI 554
G+ G+++P+PIQ + P+ G +L A++G+GKT + + A+ ++
Sbjct: 27 GLNEAGFEKPSPIQLKAIPLGRCGLDLIAQAKSGTGKTCVFSVIALENV 75
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 35.5 bits (78), Expect = 0.033
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = +3
Query: 441 PIQAQGWPIAMSGKNLXGVAQTGSGKTLDYILPAI 545
PIQA + G+++ G A+TG+GKTL + LP +
Sbjct: 98 PIQASTFNYIYDGEDVIGQARTGTGKTLSFALPLV 132
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 34.3 bits (75), Expect = 0.076
Identities = 20/53 (37%), Positives = 28/53 (52%)
Frame = +3
Query: 393 DYVQXGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVAQTGSGKTLDYILPAIVH 551
D V + + +PT IQ P + ++ AQTGSGKTL Y+ P +VH
Sbjct: 387 DDVLKALDALNIHQPTVIQMVTIPKIIHRHHVICAAQTGSGKTLAYLAP-LVH 438
>SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 33.9 bits (74), Expect = 0.10
Identities = 12/26 (46%), Positives = 20/26 (76%)
Frame = +3
Query: 462 PIAMSGKNLXGVAQTGSGKTLDYILP 539
P+ M GK++ +A+TGSGKT +++P
Sbjct: 313 PLVMDGKDVVAMARTGSGKTAAFLIP 338
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 31.5 bits (68), Expect = 0.54
Identities = 13/48 (27%), Positives = 29/48 (60%)
Frame = +3
Query: 414 KTMGYKEPTPIQAQGWPIAMSGKNLXGVAQTGSGKTLDYILPAIVHIN 557
+T G+++P+ IQ + + G+++ AQ+G+GKT + + + I+
Sbjct: 13 ETEGFEKPSAIQQRAIKPILKGRDVIAQAQSGTGKTATFSISVLQAID 60
>SB_51441| Best HMM Match : DEAD (HMM E-Value=4.9e-19)
Length = 304
Score = 30.7 bits (66), Expect = 0.94
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +3
Query: 423 GYKEPTPIQAQGWPIAMSGKNLXGVAQTGSGKTLDYILPAIV 548
GY + P+Q Q ++ K+ + TG+GKT+ Y +PA++
Sbjct: 136 GYIDFRPMQRQAIDTLLAEKDSLILLPTGAGKTICYAIPALL 177
>SB_49218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 480
Score = 29.9 bits (64), Expect = 1.6
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = +3
Query: 348 EVHNPIQYFEEAXFPDYVQXGVKTMGYKEPTPIQAQGW 461
++H P++ + FP Y + Y P P QA W
Sbjct: 6 DIHGPVRKLHKHGFPGYEEDYAAVFKYPTPWPEQAMEW 43
>SB_5719| Best HMM Match : Helicase_C (HMM E-Value=1e-24)
Length = 1366
Score = 29.9 bits (64), Expect = 1.6
Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 1/101 (0%)
Frame = +3
Query: 252 KNFYDPHPTVLKRSPYEVEEY-RNKHEVTVSGVEVHNPIQYFEEAXFPDYVQXGVKTMGY 428
K D + LK E +E+ +N TV+ + P+ E P V + +G+
Sbjct: 467 KELPDENDENLKEFAPEDDEFLKNLSLDTVAQMAAGIPV----ETETPPEVYKALGQLGF 522
Query: 429 KEPTPIQAQGWPIAMSGKNLXGVAQTGSGKTLDYILPAIVH 551
Q Q +SG + V TG+GK+L Y LPA ++
Sbjct: 523 SSFRAGQEQAVMRILSGMSSLVVLSTGAGKSLCYQLPAYMY 563
>SB_3046| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 734
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -1
Query: 177 HQSLQILQIYCHRCQTETNYRRICCLLQIWNHRFHGY 67
H L YC RC T CCLLQ++++ ++G+
Sbjct: 484 HLQQPSLAAYC-RCITILTTAIACCLLQVYHNTYNGH 519
>SB_6554| Best HMM Match : Isy1 (HMM E-Value=0)
Length = 675
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +3
Query: 306 EEYRNK-HEVTVSGVEVHNPIQYFEEAXFPDY 398
EE NK H++ + + +HNP YFE+ DY
Sbjct: 234 EEVNNKLHKILIVNM-IHNPFNYFEKKSPTDY 264
>SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27)
Length = 472
Score = 27.9 bits (59), Expect = 6.6
Identities = 22/80 (27%), Positives = 33/80 (41%), Gaps = 5/80 (6%)
Frame = -1
Query: 564 LVNLCAQWLARC---SPTFSRNPFGLRQXNSFQT*LSASLELEWASVLCNPLSLHXVAHN 394
LV+ A W + C SP F LR N ++ VLC+ L +
Sbjct: 72 LVDFYAPWCSDCQRLSPLFDTAALQLRDNNPSLRFAKVIYSIDECKVLCDNLMASDGVPD 131
Query: 393 QENXLLQSIE*DYEP--QRH 340
E LL+ + ++EP Q+H
Sbjct: 132 DEPTLLELDDSNFEPAVQKH 151
>SB_52637| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0)
Length = 505
Score = 27.5 bits (58), Expect = 8.8
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = +3
Query: 294 PYEVEEYRNKHEVTVSGVEVHNPIQYFEEAXFPDYVQXGVKTMG 425
P+E + + KH++ V+ VE + +Q +E F + ++ VK G
Sbjct: 252 PFEPPKPKTKHKLDVATVEDYKKLQEYEREKFTEMIKQ-VKDTG 294
>SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)
Length = 238
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +3
Query: 480 KNLXGVAQTGSGKTLDYILPAI 545
K++ G+A+TGSGKT + LP +
Sbjct: 2 KDVIGLAETGSGKTGAFALPIL 23
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,762,910
Number of Sequences: 59808
Number of extensions: 341790
Number of successful extensions: 938
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 885
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 935
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1451595000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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