BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brP-0911 (600 letters) Database: mosquito 2352 sequences; 563,979 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AY957503-1|AAY41942.1| 596|Anopheles gambiae vasa-like protein ... 63 6e-12 AF387862-1|AAL56547.1| 476|Anopheles gambiae gag polyprotein pr... 25 1.9 AY534996-1|AAT07394.1| 471|Anopheles gambiae XK-related b protein. 24 4.3 AY578797-1|AAT07302.1| 304|Anopheles gambiae activin protein. 23 5.7 AF043440-1|AAC05665.1| 234|Anopheles gambiae putative pupal-spe... 23 5.7 AY805323-1|AAV66543.1| 459|Anopheles gambiae beta subunit-GABA-... 23 10.0 AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein. 23 10.0 >AY957503-1|AAY41942.1| 596|Anopheles gambiae vasa-like protein protein. Length = 596 Score = 63.3 bits (147), Expect = 6e-12 Identities = 30/76 (39%), Positives = 45/76 (59%) Frame = +3 Query: 327 EVTVSGVEVHNPIQYFEEAXFPDYVQXGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVAQT 506 +V VSG + ++ FE + + V V+ Y +PTPIQ PI ++G++L AQT Sbjct: 161 QVRVSGENPPDHVESFERSGLREEVMTNVRKSSYTKPTPIQRYAIPIILNGRDLMACAQT 220 Query: 507 GSGKTLDYILPAIVHI 554 GSGKT ++LP I H+ Sbjct: 221 GSGKTAAFMLPMIHHL 236 >AF387862-1|AAL56547.1| 476|Anopheles gambiae gag polyprotein protein. Length = 476 Score = 25.0 bits (52), Expect = 1.9 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 6/38 (15%) Frame = -1 Query: 201 ALQRILFSHQSLQILQ------IYCHRCQTETNYRRIC 106 A +R+ SHQS IL+ I CHRC+ + +R C Sbjct: 180 AQKRMEKSHQSESILRVGPEKKITCHRCRKPGHMKRDC 217 >AY534996-1|AAT07394.1| 471|Anopheles gambiae XK-related b protein. Length = 471 Score = 23.8 bits (49), Expect = 4.3 Identities = 14/41 (34%), Positives = 20/41 (48%) Frame = -2 Query: 128 RRIIAEFVASSKFGTTVSTAIIPITRHDYFSDLVEDVYLNY 6 RR+ A+ A ++F I+ YF D+V DV L Y Sbjct: 59 RRVRAKSKAMTEFLPLCDVLFNVISLAGYFCDVVFDVVLGY 99 >AY578797-1|AAT07302.1| 304|Anopheles gambiae activin protein. Length = 304 Score = 23.4 bits (48), Expect = 5.7 Identities = 8/12 (66%), Positives = 9/12 (75%) Frame = -1 Query: 90 WNHRFHGYYSNY 55 W R HGYY+NY Sbjct: 197 WIIRPHGYYANY 208 >AF043440-1|AAC05665.1| 234|Anopheles gambiae putative pupal-specific cuticular proteinCP2d protein. Length = 234 Score = 23.4 bits (48), Expect = 5.7 Identities = 10/31 (32%), Positives = 17/31 (54%) Frame = +3 Query: 279 VLKRSPYEVEEYRNKHEVTVSGVEVHNPIQY 371 V++R P V+ + H+V V VH P+ + Sbjct: 139 VVRREPSAVKIAQPVHKVIAQPVHVHAPVAH 169 >AY805323-1|AAV66543.1| 459|Anopheles gambiae beta subunit-GABA-A-gated chloride channelprotein. Length = 459 Score = 22.6 bits (46), Expect = 10.0 Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 3/58 (5%) Frame = +3 Query: 270 HPTVLKRSPYEVEEYRNKHEVTVSGVEVH---NPIQYFEEAXFPDYVQXGVKTMGYKE 434 +P + E+E Y TVS V ++ PI+ EEA P + G +T KE Sbjct: 149 YPLDSQNCTVEIESYG----YTVSDVVMYWRSTPIRGVEEAELPQFTIIGYETNDRKE 202 >AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein. Length = 3398 Score = 22.6 bits (46), Expect = 10.0 Identities = 9/34 (26%), Positives = 17/34 (50%) Frame = +2 Query: 419 NGLQRTDAHSSSRLADSYVWKEFXWRSPNGFREN 520 N ++R+ A S + ++++ F W REN Sbjct: 3086 NHMERSSASSLHNMFNNWIKLPFEWLFSTSMREN 3119 Database: mosquito Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 563,979 Number of sequences in database: 2352 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 573,359 Number of Sequences: 2352 Number of extensions: 11347 Number of successful extensions: 26 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 26 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 26 length of database: 563,979 effective HSP length: 61 effective length of database: 420,507 effective search space used: 58029966 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -