Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0908
         (750 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     23   2.0  
EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport pe...    23   3.4  
EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport pe...    23   3.4  
EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport pe...    23   3.4  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       23   3.4  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    22   6.0  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    22   6.0  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   8.0  

>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = +3

Query: 129 SFHTHHYVSNHSDHFHHIHRG 191
           +F  H  V N   HF H H G
Sbjct: 162 TFRYHFNVHNSGTHFWHSHSG 182


>EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport
           peptide isoform C protein.
          Length = 136

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 105 SPPSGRSHSFHTHHY 149
           S P+GRS +F  HH+
Sbjct: 29  SSPAGRSPAFLPHHF 43


>EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport
           peptide isoform B protein.
          Length = 120

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 105 SPPSGRSHSFHTHHY 149
           S P+GRS +F  HH+
Sbjct: 29  SSPAGRSPAFLPHHF 43


>EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport
           peptide isoform A protein.
          Length = 140

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 105 SPPSGRSHSFHTHHY 149
           S P+GRS +F  HH+
Sbjct: 29  SSPAGRSPAFLPHHF 43


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = -1

Query: 237 NCSSVNPGDGKLNIGNLCGYDGNGLN 160
           +C +V  G G+ +  ++CG  G+ +N
Sbjct: 21  SCIAVGVGSGRNSAPSICGEHGHCVN 46


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -3

Query: 142 CVWKE*LRPDGGESEKW 92
           C+W E + PD  E+  W
Sbjct: 511 CLWSEQVGPDSLETRIW 527


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +2

Query: 134 PYTPLRFEPFRPFPSYPQ 187
           PY P     +RP+P Y Q
Sbjct: 251 PYVPFYRYCYRPYPVYNQ 268


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/33 (24%), Positives = 19/33 (57%)
 Frame = +1

Query: 559 ISIRNFQRSTLIFKCSHNKISNTSLITFWSLKV 657
           +S  NF+  + +  CS+  + + S  TF+ +++
Sbjct: 101 VSNNNFKTYSNVTTCSYYSLDDLSEDTFYDIRL 133


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,437
Number of Sequences: 336
Number of extensions: 3687
Number of successful extensions: 18
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)