Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0908
(750 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_44956| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_55784| Best HMM Match : CUB (HMM E-Value=3.1e-25) 33 0.25
SB_11562| Best HMM Match : SelP_N (HMM E-Value=0.45) 33 0.33
SB_59540| Best HMM Match : Amelogenin (HMM E-Value=4.7) 32 0.57
SB_36131| Best HMM Match : His_leader (HMM E-Value=2.7e-10) 31 0.76
SB_19803| Best HMM Match : Baculo_11_kDa (HMM E-Value=9.4) 31 1.00
SB_9702| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.00
SB_50808| Best HMM Match : Ricin_B_lectin (HMM E-Value=0.33) 31 1.3
SB_14830| Best HMM Match : NADH5_C (HMM E-Value=1.1) 31 1.3
SB_5942| Best HMM Match : Sec7 (HMM E-Value=3.1e-09) 31 1.3
SB_3342| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_13394| Best HMM Match : Chordopox_A13L (HMM E-Value=3.2) 30 2.3
SB_8350| Best HMM Match : ShTK (HMM E-Value=2.5e-09) 30 2.3
SB_56821| Best HMM Match : His_leader (HMM E-Value=0.41) 26 2.5
SB_38258| Best HMM Match : Sec7 (HMM E-Value=5.1e-22) 29 3.0
SB_35197| Best HMM Match : SAP (HMM E-Value=3.2) 29 3.0
SB_9084| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_5388| Best HMM Match : PH (HMM E-Value=2.5e-08) 29 3.0
SB_31213| Best HMM Match : SNF2_N (HMM E-Value=0) 29 4.0
SB_21044| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 29 4.0
SB_430| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_49487| Best HMM Match : Zip (HMM E-Value=0.014) 28 7.0
SB_59326| Best HMM Match : FtsX (HMM E-Value=2.2) 28 7.0
SB_42986| Best HMM Match : Glycos_transf_4 (HMM E-Value=1.5) 28 7.0
SB_56816| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_25016| Best HMM Match : PDZ (HMM E-Value=5.6e-08) 28 9.3
SB_15224| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_57911| Best HMM Match : Drf_FH1 (HMM E-Value=2.3) 28 9.3
SB_44298| Best HMM Match : Herpes_US9 (HMM E-Value=8.9) 28 9.3
SB_34021| Best HMM Match : Zip (HMM E-Value=0) 28 9.3
SB_31540| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_29569| Best HMM Match : NAM (HMM E-Value=4.8) 28 9.3
SB_27152| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_7983| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_5609| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
>SB_44956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 736
Score = 34.3 bits (75), Expect = 0.11
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +3
Query: 111 PSGRSHSFHTHHYVSNHSDHFHHIH 185
P R H H HH+ NH H HH H
Sbjct: 253 PRHRYHHHHHHHHQHNHHQHHHHHH 277
Score = 29.5 bits (63), Expect = 3.0
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = +3
Query: 126 HSFHTHHYVSNHSDHFHHIHRGSRYLISH 212
H+ H HH+ +H H HH H + H
Sbjct: 267 HNHHQHHHHHHHHHHNHHHHHQQHHHHHH 295
Score = 29.1 bits (62), Expect = 4.0
Identities = 11/35 (31%), Positives = 14/35 (40%)
Frame = +3
Query: 78 HQAIDHFSDSPPSGRSHSFHTHHYVSNHSDHFHHI 182
H +H H H HH+ +H H HHI
Sbjct: 264 HHQHNHHQHHHHHHHHHHNHHHHHQQHHHHHHHHI 298
Score = 27.9 bits (59), Expect = 9.3
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = +3
Query: 126 HSFHTHHYVSNHSDHFHHIHRGSRYLIS 209
H H HH+ ++H H H H ++I+
Sbjct: 273 HHHHHHHHHNHHHHHQQHHHHHHHHIIN 300
>SB_55784| Best HMM Match : CUB (HMM E-Value=3.1e-25)
Length = 418
Score = 33.1 bits (72), Expect = 0.25
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +3
Query: 99 SDSPPSGRSHSFHTHHYVSNHSDHFHHIH 185
S S S S S + HHY H H+HH H
Sbjct: 316 SSSSSSTLSSSSYRHHYRYRHRQHYHHFH 344
>SB_11562| Best HMM Match : SelP_N (HMM E-Value=0.45)
Length = 453
Score = 32.7 bits (71), Expect = 0.33
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 126 HSFHTHHYVSNHSDHFHHIHRGSRYLISHR 215
+ +H HH+ +H H HH H+ R+ HR
Sbjct: 307 YRYHHHHHHRHHHHHHHHHHQRHRHRHRHR 336
Score = 27.9 bits (59), Expect = 9.3
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = +3
Query: 75 IHQAIDHFSDSPPSGRSHSFHTHHYVSNHSDHFHHIHRGSRYLISHR 215
I AI + +PP R H H H + +H H H HR R+ HR
Sbjct: 294 ITTAITITTATPPY-RYHHHHHHRHHHHHHHHHHQRHR-HRHRHRHR 338
>SB_59540| Best HMM Match : Amelogenin (HMM E-Value=4.7)
Length = 181
Score = 31.9 bits (69), Expect = 0.57
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +2
Query: 110 PIRTKSFFPYTPLRFEPFRPFPSYPQRFPIFNFP 211
P+R KS +P P+ P RP YP R PI +P
Sbjct: 21 PVRPKSGYPVRPVGGYPVRPMGGYPVR-PIGGYP 53
Score = 31.5 bits (68), Expect = 0.76
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +2
Query: 110 PIRTKSFFPYTPLRFEPFRPFPSYPQRFPIFNFP 211
P+R KS +P P+ P RP YP R P+ +P
Sbjct: 77 PVRPKSGYPVRPMGGYPVRPVGGYPVR-PVGGYP 109
>SB_36131| Best HMM Match : His_leader (HMM E-Value=2.7e-10)
Length = 416
Score = 31.5 bits (68), Expect = 0.76
Identities = 21/66 (31%), Positives = 28/66 (42%)
Frame = +3
Query: 27 HQLYPTTGESVPSRIKIHQAIDHFSDSPPSGRSHSFHTHHYVSNHSDHFHHIHRGSRYLI 206
H +P++ S+ I IH H S S H HH+ S+ S HH S +I
Sbjct: 296 HHHHPSSSSSIIIIIIIHH---HHHPSSSSSIIIIIHHHHHPSSSSSIIHH--HPSSIII 350
Query: 207 SHRPDS 224
H P S
Sbjct: 351 HHHPSS 356
Score = 29.1 bits (62), Expect = 4.0
Identities = 24/79 (30%), Positives = 32/79 (40%), Gaps = 11/79 (13%)
Frame = +3
Query: 21 LIHQLYPTTGESV------PSRIKIHQAIDHFSDSPPSGRSHSFHTHHYVSNHSD----- 167
+IH +P++ + PS I IH PS S S HH+ S+ S
Sbjct: 164 IIHHHHPSSSSIIIIIHHHPSSIIIHHPSSSIIHHHPS--SSSIIIHHHPSSSSSIIIII 221
Query: 168 HFHHIHRGSRYLISHRPDS 224
H HH S +I H P S
Sbjct: 222 HHHHHPSSSSSIIIHHPSS 240
>SB_19803| Best HMM Match : Baculo_11_kDa (HMM E-Value=9.4)
Length = 177
Score = 31.1 bits (67), Expect = 1.00
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = +3
Query: 72 KIHQAIDHFSDSPPS--GRSHSFHTHHYVSNHSDHFHHIHRGSRYLI 206
++ AI+ FS + P+ +H +H + NH H HH + Y I
Sbjct: 54 RVLDAIEFFSQNNPNCLEMTHLYHDQQHQWNHQHHHHHQYHHRHYSI 100
>SB_9702| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 708
Score = 31.1 bits (67), Expect = 1.00
Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +3
Query: 69 IKIHQAIDHFSDSPP-SGRSHSFHTHHYVSNHSDHFHHIH 185
I I I S SPP S S S H +H + +H H HH+H
Sbjct: 88 ITIMTIISSSSSSPPLSSSSQSSHRYHPLCHH--HHHHLH 125
>SB_50808| Best HMM Match : Ricin_B_lectin (HMM E-Value=0.33)
Length = 680
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +2
Query: 131 FPYTPLRFEPFRPFPSYPQRFPIFNFPSP 217
F P R PF PFPSY Q P ++ P
Sbjct: 400 FSTPPPRRNPFAPFPSYSQSLPEMDYMPP 428
>SB_14830| Best HMM Match : NADH5_C (HMM E-Value=1.1)
Length = 175
Score = 30.7 bits (66), Expect = 1.3
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +3
Query: 132 FHTHHYVSNHSDHFHHIHRGSRY 200
+H HHY NH H H+H Y
Sbjct: 95 YHFHHYHYNHHHHHFHLHHHLHY 117
>SB_5942| Best HMM Match : Sec7 (HMM E-Value=3.1e-09)
Length = 304
Score = 30.7 bits (66), Expect = 1.3
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +3
Query: 126 HSFHTHHYVSNHSDHFHHIHRGSRY 200
H ++ HH + +H H+HH H R+
Sbjct: 156 HHYYHHHLLHHHHHHWHHHHHHHRH 180
Score = 27.9 bits (59), Expect = 9.3
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +3
Query: 129 SFHTHHYVSNHSDHFHHIH 185
+ H HHY +H H HH H
Sbjct: 152 AIHHHHYYHHHLLHHHHHH 170
>SB_3342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 30.3 bits (65), Expect = 1.7
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +3
Query: 99 SDSPPSGRSHSFHTHHYVSNHSDHFHH 179
S S S S +H HH+ +H +H+HH
Sbjct: 252 SSSSSSPLSSYYHHHHHRRHHLNHYHH 278
>SB_13394| Best HMM Match : Chordopox_A13L (HMM E-Value=3.2)
Length = 694
Score = 29.9 bits (64), Expect = 2.3
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +3
Query: 126 HSFHTHHYVSNHSDHFHHIHRGSRYLIS 209
H+ H HH+ H H HH H + +I+
Sbjct: 231 HNHHHHHHHHYHHYHHHHHHHNNNTIIT 258
Score = 29.5 bits (63), Expect = 3.0
Identities = 10/31 (32%), Positives = 14/31 (45%)
Frame = +3
Query: 120 RSHSFHTHHYVSNHSDHFHHIHRGSRYLISH 212
R H H HH+ +H + HH H + H
Sbjct: 209 RHHQHHQHHHHHHHQHNHHHHHHNHHHHHHH 239
Score = 28.7 bits (61), Expect = 5.3
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +3
Query: 123 SHSFHTHHYVSNHSDHFHHIH 185
+H H H++ +H H+HH H
Sbjct: 225 NHHHHHHNHHHHHHHHYHHYH 245
Score = 28.3 bits (60), Expect = 7.0
Identities = 12/42 (28%), Positives = 18/42 (42%)
Frame = +3
Query: 60 PSRIKIHQAIDHFSDSPPSGRSHSFHTHHYVSNHSDHFHHIH 185
PS + + H H+ H HH+ ++H H HH H
Sbjct: 202 PSIVIYRRHHQHHQHHHHHHHQHNHHHHHH-NHHHHHHHHYH 242
Score = 27.9 bits (59), Expect = 9.3
Identities = 10/36 (27%), Positives = 15/36 (41%)
Frame = +3
Query: 78 HQAIDHFSDSPPSGRSHSFHTHHYVSNHSDHFHHIH 185
H H + H + HH+ +H H+HH H
Sbjct: 213 HHQHHHHHHHQHNHHHHHHNHHHHHHHHYHHYHHHH 248
Score = 27.9 bits (59), Expect = 9.3
Identities = 10/37 (27%), Positives = 16/37 (43%)
Frame = +3
Query: 126 HSFHTHHYVSNHSDHFHHIHRGSRYLISHRPDSPTNS 236
H H H++ +H +H HH H + H N+
Sbjct: 219 HHHHQHNHHHHHHNHHHHHHHHYHHYHHHHHHHNNNT 255
>SB_8350| Best HMM Match : ShTK (HMM E-Value=2.5e-09)
Length = 1103
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +2
Query: 170 FPSYPQRFPIFNFPSPGFTDEQFPAMQNYPNQ 265
+PSYPQ++P+ P P + +P Q YP Q
Sbjct: 965 YPSYPQQYPMLQ-PYP--QQQPYPQQQPYPQQ 993
Score = 28.7 bits (61), Expect = 5.3
Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Frame = +2
Query: 173 PSYPQRFPIFNFPSPGFTD--EQFPAMQNYPNQ 265
PS P FP + +P + +Q+P +Q YP Q
Sbjct: 949 PSEPPPFPGYGMSNPSYPSYPQQYPMLQPYPQQ 981
>SB_56821| Best HMM Match : His_leader (HMM E-Value=0.41)
Length = 131
Score = 26.2 bits (55), Expect(2) = 2.5
Identities = 15/43 (34%), Positives = 17/43 (39%)
Frame = +3
Query: 135 HTHHYVSNHSDHFHHIHRGSRYLISHRPDSPTNSSPRCRTIRI 263
H HH+ H HH H Y H P S +SS I I
Sbjct: 51 HYHHHHRQHITVHHHYH---HYHHHHHPPSSLSSSASSANIII 90
Score = 22.2 bits (45), Expect(2) = 2.5
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +3
Query: 93 HFSDSPPSGRSHSFHTHH 146
H PPS S+ H HH
Sbjct: 13 HQHHHPPSSPSYHHHRHH 30
>SB_38258| Best HMM Match : Sec7 (HMM E-Value=5.1e-22)
Length = 237
Score = 29.5 bits (63), Expect = 3.0
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +3
Query: 129 SFHTHHYVSNHSDHFHHIHRGSRYLI 206
+ H HHY +H H HH H +LI
Sbjct: 167 AIHHHHYYHHHLLHHHHHHWHHHHLI 192
Score = 29.1 bits (62), Expect = 4.0
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +3
Query: 126 HSFHTHHYVSNHSDHFHHIH 185
H ++ HH + +H H+HH H
Sbjct: 171 HHYYHHHLLHHHHHHWHHHH 190
>SB_35197| Best HMM Match : SAP (HMM E-Value=3.2)
Length = 323
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +3
Query: 99 SDSPPSGRSHSFHTHHYVSNHSDHFHHIHRGSRYLISHRPDSPTNSSPRC 248
S S + S S + S+H H HH+H + L R +PT + +C
Sbjct: 189 SSSSAAAASSSSSSSSSSSHHHYHRHHLHHHHKALYKLRQHTPTLLAQQC 238
>SB_9084| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 166
Score = 29.5 bits (63), Expect = 3.0
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3
Query: 135 HTHHYVSNHSDHFHHIHR 188
H HH+ +H DH HH H+
Sbjct: 5 HHHHHDHHHHDHHHHDHQ 22
Score = 28.7 bits (61), Expect = 5.3
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +3
Query: 111 PSGRSHSFHTHHYVSNHSDHFHHIHR 188
P+ H H HH+ +H DH HH H+
Sbjct: 3 PNHHHHHDH-HHHDHHHHDHQHHDHQ 27
>SB_5388| Best HMM Match : PH (HMM E-Value=2.5e-08)
Length = 293
Score = 29.5 bits (63), Expect = 3.0
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +2
Query: 131 FPYTPLRFEPFRPFPSYPQRFPIFNFPSPGFTDEQFPAMQNYP 259
+P P +P+ P YP + P +P PG+ + +P YP
Sbjct: 158 YPPQPYPAQPY-PQQGYPPQPPPQAYPQPGYPPQGYPPTGPYP 199
>SB_31213| Best HMM Match : SNF2_N (HMM E-Value=0)
Length = 919
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/53 (30%), Positives = 22/53 (41%)
Frame = +3
Query: 36 YPTTGESVPSRIKIHQAIDHFSDSPPSGRSHSFHTHHYVSNHSDHFHHIHRGS 194
+ T+G P R H ++ S H HH+ +H H HH HR S
Sbjct: 405 HSTSGPFSPPRHHGHGGLEAIQTS-----KHQQDQHHHHHHHHHHRHHKHRSS 452
>SB_21044| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 1507
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -1
Query: 249 CIAGNCSSVNPGDGKLNIGNLCGYDGNGLNGSKRSGVYGKND 124
CIAG+CS + GDG + G DG+G + G Y + D
Sbjct: 558 CIAGSCSDLCEGDGFGDSGG--DGDGDGNHDGDGDGNYDEGD 597
>SB_430| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2202
Score = 28.7 bits (61), Expect = 5.3
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 4/37 (10%)
Frame = +3
Query: 123 SHSFHTHHYVSNHS-DHFHHIHRGS---RYLISHRPD 221
SH H HY NH DH H H S R ++ H+ D
Sbjct: 952 SHHHHYQHYQYNHHHDHQSHQHHDSHHHREVLDHKTD 988
Score = 27.9 bits (59), Expect = 9.3
Identities = 10/35 (28%), Positives = 18/35 (51%)
Frame = +3
Query: 108 PPSGRSHSFHTHHYVSNHSDHFHHIHRGSRYLISH 212
P S + H HH+ ++ + HH H+ ++ SH
Sbjct: 943 PESHKRHRHSHHHHYQHYQYNHHHDHQSHQHHDSH 977
>SB_49487| Best HMM Match : Zip (HMM E-Value=0.014)
Length = 510
Score = 28.3 bits (60), Expect = 7.0
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +3
Query: 135 HTHHYVSNHSDHFHHIHRGSR 197
HT ++ NH DH HH H +
Sbjct: 68 HTDNHHQNHHDHHHHHHHDKK 88
>SB_59326| Best HMM Match : FtsX (HMM E-Value=2.2)
Length = 238
Score = 28.3 bits (60), Expect = 7.0
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +3
Query: 132 FHTHHYVSNHSDHFHHIH 185
+H HH+ +H D+ HH H
Sbjct: 101 YHHHHHYHHHLDYDHHYH 118
>SB_42986| Best HMM Match : Glycos_transf_4 (HMM E-Value=1.5)
Length = 279
Score = 28.3 bits (60), Expect = 7.0
Identities = 13/43 (30%), Positives = 18/43 (41%)
Frame = +3
Query: 42 TTGESVPSRIKIHQAIDHFSDSPPSGRSHSFHTHHYVSNHSDH 170
T+ S P Q++ S SH H HH + NH+ H
Sbjct: 105 TSSSSPPPSSSSSQSLPPPPSSSSQPSSHHHHHHHLLHNHNHH 147
>SB_56816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1200
Score = 27.9 bits (59), Expect = 9.3
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +3
Query: 123 SHSFHTHHYVSNHSDHFHHIHRGSR 197
++ H HH +H H HH HR R
Sbjct: 728 TNDHHNHHAHYHHRRHHHHHHRRRR 752
>SB_25016| Best HMM Match : PDZ (HMM E-Value=5.6e-08)
Length = 816
Score = 27.9 bits (59), Expect = 9.3
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +3
Query: 123 SHSFHTHHYVSNHSDHFHHIHRGSR 197
++ H HH +H H HH HR R
Sbjct: 755 TNDHHNHHAHYHHRRHHHHHHRRRR 779
>SB_15224| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1060
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 110 PIRTKSFFPYTPLRFEPFRPFPSYPQRFPIFNFP 211
P+R KS +P P+ P R YP R P+ +P
Sbjct: 906 PVRPKSGYPVRPMGGYPVRHVGGYPVR-PVGGYP 938
>SB_57911| Best HMM Match : Drf_FH1 (HMM E-Value=2.3)
Length = 169
Score = 27.9 bits (59), Expect = 9.3
Identities = 15/49 (30%), Positives = 21/49 (42%)
Frame = +2
Query: 89 RPFFRFTPIRTKSFFPYTPLRFEPFRPFPSYPQRFPIFNFPSPGFTDEQ 235
RP + P ++ PY R RP P Y +R N P P + D +
Sbjct: 65 RPPYERPPSESRPRPPYDDRRTSETRPRPPYDERRVSENRPKPPYDDRR 113
>SB_44298| Best HMM Match : Herpes_US9 (HMM E-Value=8.9)
Length = 138
Score = 27.9 bits (59), Expect = 9.3
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +3
Query: 111 PSGRSHSFHTHHYVSNHSDHFHH 179
P R H H HH+ NH H HH
Sbjct: 41 PRHRYH--HHHHHQHNHHQHHHH 61
Score = 27.9 bits (59), Expect = 9.3
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = +3
Query: 126 HSFHTHHYVSNHSDHFHHIHRGSRYLIS 209
H+ H HH+ NH H H ++I+
Sbjct: 53 HNHHQHHHHHNHHHHHQQHHHHHHHIIN 80
>SB_34021| Best HMM Match : Zip (HMM E-Value=0)
Length = 808
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/45 (28%), Positives = 18/45 (40%)
Frame = +3
Query: 78 HQAIDHFSDSPPSGRSHSFHTHHYVSNHSDHFHHIHRGSRYLISH 212
H +H G SH H H + ++ H HH H + SH
Sbjct: 315 HSHENHGHSHENHGHSHENHGHSHENHGHSHKHHGHSHDNHGHSH 359
>SB_31540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 400
Score = 27.9 bits (59), Expect = 9.3
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +3
Query: 93 HFSDSPPSGRSHSFHTHHYVSNHSDHFHHIHRGSRYLIS 209
+ S +PP H +H HH NH H HH HR + I+
Sbjct: 219 NISTTPPQ---HHYHHHH--HNHYSHNHH-HRNIIFTIT 251
>SB_29569| Best HMM Match : NAM (HMM E-Value=4.8)
Length = 375
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Frame = -3
Query: 271 AELIRIVLHRGELFVGESGR--WEIKYREP 188
A + R V+H GE+++G GR E K+R P
Sbjct: 27 ASVPRYVVHPGEVYIGRGGRGLLESKWRNP 56
>SB_27152| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 160
Score = 27.9 bits (59), Expect = 9.3
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +3
Query: 207 SHRPDSPTNSSPRCRTIRISSARSPEPRLARVSVTK 314
S PD PT+S R ++SS S +PR VS T+
Sbjct: 11 STAPDKPTSSPERVVEEQVSSEISQQPRRLSVSSTE 46
>SB_7983| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 836
Score = 27.9 bits (59), Expect = 9.3
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = +3
Query: 105 SPPSGRSHSFHTHHYVSNHSDHFHHIHRGSRYLISHRPDSPTNSS 239
SPPS S H HH H HH + ++I P SP+ SS
Sbjct: 444 SPPSTSSSQRHHHH------PHHHHSAIITIHIIITAPSSPSTSS 482
>SB_5609| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 155
Score = 27.9 bits (59), Expect = 9.3
Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Frame = +3
Query: 93 HFSDSPPSGRSH---SFHTHHYVSNHSDHFHHIHRGSRYLISHRPDSPTNSSP 242
HF+D+ S H SF H Y+S D + G ++ P +++SP
Sbjct: 3 HFTDTLISANIHLCGSFGDHSYLSTRVDRIEFLQPGDPLVLERPPPRWSSNSP 55
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,166,038
Number of Sequences: 59808
Number of extensions: 459873
Number of successful extensions: 1732
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1226
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1599
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2034222073
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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