Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0908
         (750 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          29   0.12 
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    27   0.47 
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    27   0.47 
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    26   1.4  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    26   1.4  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    26   1.4  
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    26   1.4  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            25   3.3  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            25   3.3  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    24   4.4  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    24   4.4  
AY752904-1|AAV30078.1|   84|Anopheles gambiae peroxidase 10 prot...    24   5.8  

>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 29.5 bits (63), Expect = 0.12
 Identities = 19/64 (29%), Positives = 25/64 (39%), Gaps = 3/64 (4%)
 Frame = +3

Query: 72  KIHQAIDHFSDSPPSGRSHSFHTHHYV---SNHSDHFHHIHRGSRYLISHRPDSPTNSSP 242
           K  Q   H S  P   + H  H HH+     N +DHF + +  +    SH    P     
Sbjct: 635 KADQTDHHQSQQPQQQQQHQHHHHHHHHHHQNPNDHFVNTNTDT-IKRSHSAQLPQREDA 693

Query: 243 RCRT 254
           R RT
Sbjct: 694 RSRT 697


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 27.5 bits (58), Expect = 0.47
 Identities = 19/77 (24%), Positives = 32/77 (41%), Gaps = 2/77 (2%)
 Frame = +3

Query: 126 HSFHTHHYVSNHSDHFHHIHRGSRYLISHRPDSPTNSSPRCRTIRISSARSPEPRLARV- 302
           HS H HH+  +H  H    H  S       P+   N     R  R +  R+ + R  ++ 
Sbjct: 180 HSQHHHHHHHHHPHHSQQQHSASPRCYPMPPEHMYNMFNFNRNGREARNRAEKNRRDKLN 239

Query: 303 -SVTKLLPLIPLIRTCP 350
            S+ +L  ++P +   P
Sbjct: 240 GSIQELSAMVPHVAESP 256



 Score = 25.4 bits (53), Expect = 1.9
 Identities = 12/47 (25%), Positives = 18/47 (38%)
 Frame = +3

Query: 108 PPSGRSHSFHTHHYVSNHSDHFHHIHRGSRYLISHRPDSPTNSSPRC 248
           P   +  S+H   +  +   H HH H        H      ++SPRC
Sbjct: 164 PQQQQPSSYHQQQHPGHSQHHHHHHHHH-----PHHSQQQHSASPRC 205



 Score = 23.8 bits (49), Expect = 5.8
 Identities = 9/32 (28%), Positives = 12/32 (37%)
 Frame = +3

Query: 81  QAIDHFSDSPPSGRSHSFHTHHYVSNHSDHFH 176
           Q   +     P    H  H HH+  +HS   H
Sbjct: 168 QPSSYHQQQHPGHSQHHHHHHHHHPHHSQQQH 199


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
            structural protein protein.
          Length = 1645

 Score = 27.5 bits (58), Expect = 0.47
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = +3

Query: 108  PPSGRSHSFHTHHYVSNHSDHFHHIHRGSRYLISHRPDSPTNSSP 242
            PPS    + ++ H + +H  H HH H G   +    P  P N++P
Sbjct: 1301 PPSRSEDTLNSSH-LHHHLHHGHHHHHGGEGV----PMGPANAAP 1340


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 10/37 (27%), Positives = 15/37 (40%)
 Frame = +3

Query: 78  HQAIDHFSDSPPSGRSHSFHTHHYVSNHSDHFHHIHR 188
           HQ   H S      + H    H   ++ + H HH H+
Sbjct: 254 HQQQQHPSSHQQQSQQHPSSQHQQPTHQTHHHHHHHQ 290


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 10/37 (27%), Positives = 15/37 (40%)
 Frame = +3

Query: 78  HQAIDHFSDSPPSGRSHSFHTHHYVSNHSDHFHHIHR 188
           HQ   H S      + H    H   ++ + H HH H+
Sbjct: 254 HQQQQHPSSHQQQSQQHPSSQHQQPTHQTHHHHHHHQ 290


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 10/37 (27%), Positives = 15/37 (40%)
 Frame = +3

Query: 78  HQAIDHFSDSPPSGRSHSFHTHHYVSNHSDHFHHIHR 188
           HQ   H S      + H    H   ++ + H HH H+
Sbjct: 206 HQQQQHPSSHQQQSQQHPSSQHQQPTHQTHHHHHHHQ 242


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +3

Query: 135 HTHHYVSNHSDHFHHIH 185
           H+HH   +H  H HH H
Sbjct: 496 HSHHAHPHHHHHHHHHH 512


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +3

Query: 18  CLIHQLYPTTGESVPSRIKI 77
           CL HQ  P   +++P+ +KI
Sbjct: 789 CLFHQTQPDVWQAIPTYLKI 808


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +3

Query: 18  CLIHQLYPTTGESVPSRIKI 77
           CL HQ  P   +++P+ +KI
Sbjct: 790 CLFHQTQPDVWQAIPTYLKI 809


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -3

Query: 244 RGELFVGESGRWEIKYREP 188
           R EL    + RWE++YR+P
Sbjct: 493 RSELDRRNAHRWELQYRDP 511


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +3

Query: 99  SDSPPSGRSHSFHTHHYVSNHSDHFHHIH 185
           S +PP   S +  +H  V   S H HH+H
Sbjct: 796 SKAPPHPHS-ALSSHSPVGAGSHHLHHLH 823


>AY752904-1|AAV30078.1|   84|Anopheles gambiae peroxidase 10
           protein.
          Length = 84

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +3

Query: 162 SDHFHHIHRGSRYLISHRPDS 224
           +D F    RG RY  S+ PD+
Sbjct: 43  ADQFAKFQRGDRYFYSNGPDT 63


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 727,848
Number of Sequences: 2352
Number of extensions: 14289
Number of successful extensions: 59
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 56
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)