Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0907
(750 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit ... 283 2e-77
SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit ... 170 2e-43
SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit C... 157 1e-39
SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subuni... 150 2e-37
SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subu... 148 7e-37
SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit... 144 9e-36
SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit... 118 1e-27
SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit C... 110 2e-25
SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein Hsp60... 51 2e-07
SPBC3E7.01 |fab1|ste12, SPBC6B1.11c|1-phosphatidylinositol-3-pho... 37 0.004
SPAC2F3.16 |||ubiquitin-protein ligase E3 |Schizosaccharomyces p... 30 0.40
SPAC328.06 |ubp2||ubiquitin C-terminal hydrolase Ubp2|Schizosacc... 28 1.2
SPAC30C2.07 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 28 1.6
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 28 1.6
SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase Tor2|S... 27 3.8
SPAC23C11.15 |pst2||Clr6 histone deacetylase complex subunit Pst... 27 3.8
SPAC1250.01 |snf21|SPAC29A4.21|ATP-dependent DNA helicase Snf21|... 26 5.0
SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase Snf22... 26 6.6
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 26 6.6
SPCC2H8.02 |||inorganic phosphate transporter|Schizosaccharomyce... 26 6.6
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 26 6.6
SPBC582.07c |rpn7||19S proteasome regulatory subunit Rpn7|Schizo... 25 8.7
SPBC1604.18c |||vacuolar sorting protein |Schizosaccharomyces po... 25 8.7
SPAC11D3.07c |||transcription factor|Schizosaccharomyces pombe|c... 25 8.7
>SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit
Cct7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 558
Score = 283 bits (694), Expect = 2e-77
Identities = 141/225 (62%), Positives = 173/225 (76%)
Frame = +1
Query: 16 QPQILLLREGTDQTQGKPQLVSNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISNDG 195
Q +++L+EGTD +QG+ QL+SNINAC V D +RTTLGP G DKL+VD G+ VISNDG
Sbjct: 7 QIPVIVLKEGTDDSQGRGQLLSNINACVAVQDTIRTTLGPLGADKLMVDDRGEVVISNDG 66
Query: 196 ATIMKLLDIIHPAAKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLI 375
ATIMKLLDI+HPAAKTLVDIA++QDAEVGDGTTSVV+ AGE+L+ + FVE+GV ++I
Sbjct: 67 ATIMKLLDIVHPAAKTLVDIARAQDAEVGDGTTSVVVFAGELLREARTFVEDGVSSHLII 126
Query: 376 RAVRTASRLAIEKIKEQAVKIDNKSPEEQRDLLLKCASTAMSSKLIHQQKDHFSKIVVDA 555
R R A++LA+ KIKE A+ +D + RDLL KCASTAM+SKLI F+K+VVDA
Sbjct: 127 RGYRKAAQLAVNKIKEIAIHLDLSDEGKLRDLLTKCASTAMNSKLIRSNSTFFTKMVVDA 186
Query: 556 VLSLDTPLLPLDMIGIKKVPGGALEDSFLVPGVAFKKLSVTLAFE 690
VL+LD L +MIGIKKVPGGA+EDS LV GVAFKK FE
Sbjct: 187 VLTLDQEDLNENMIGIKKVPGGAMEDSLLVKGVAFKKTFSYAGFE 231
Score = 25.8 bits (54), Expect = 6.6
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +3
Query: 657 FQETFSYAGF*MQXKTYQD 713
F++TFSYAGF Q K +++
Sbjct: 221 FKKTFSYAGFEQQPKFFKN 239
>SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit
Cct4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 527
Score = 170 bits (414), Expect = 2e-43
Identities = 91/217 (41%), Positives = 143/217 (65%), Gaps = 6/217 (2%)
Frame = +1
Query: 52 QTQGKPQLV--SNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDII 225
Q + KPQ V SNI A + V DA+RT+LGP+GMDK+I G+ +++NDGATI+K L ++
Sbjct: 12 QDREKPQEVRLSNIMAARSVADAIRTSLGPKGMDKMIQTGKGEVILTNDGATILKHLSVL 71
Query: 226 HPAAKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLA 405
HPAAK LVD++ +QD E GDGTTSVVILAG +L + +++G+HP V+ + + A+
Sbjct: 72 HPAAKMLVDLSAAQDVEAGDGTTSVVILAGSMLACAEKLLKKGIHPTVIAESFQRAAGFT 131
Query: 406 IEKIKEQAVKIDNKSPEEQRDLLLKCASTAMSSKLIHQQKDHFSKIVVDAVLSLDTPLLP 585
++ +KE A+ I+ R+ LL+ A+T+++SK++ Q + + I VDAVL + P +
Sbjct: 132 VDCMKENALAIE----LSDRESLLRAATTSLNSKIVSQYSNLLAPIAVDAVLKVIDPRVA 187
Query: 586 LDM----IGIKKVPGGALEDSFLVPGVAFKKLSVTLA 684
++ I I K GG ++D+ L+PG+A + +V A
Sbjct: 188 TNVDLKDIRIVKKLGGIIDDTELIPGLALTQTAVKSA 224
>SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit
Cct2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 527
Score = 157 bits (382), Expect = 1e-39
Identities = 93/225 (41%), Positives = 138/225 (61%), Gaps = 2/225 (0%)
Frame = +1
Query: 31 LLREGTDQTQGKPQLVSNINACQLVVDAVRTTLGPRGMDKLIVDHN-GKAVISNDGATIM 207
+ E Q +G+ +S+ V D V++TLGP+GMDK++ ++ G V++NDGATI+
Sbjct: 8 IFNESGIQERGENARLSSFVGAIAVGDLVKSTLGPKGMDKILQSNSSGDIVVTNDGATIL 67
Query: 208 KLLDIIHPAAKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVR 387
K + + + AAK LV+I+K QD EVGDGTTSV + A E+L++ + V +HP+V+I R
Sbjct: 68 KSIALDNAAAKVLVNISKVQDDEVGDGTTSVCVFAAELLRQAEIMVNAKIHPQVIIDGYR 127
Query: 388 TASRLAIEKIKEQAVKIDNKS-PEEQRDLLLKCASTAMSSKLIHQQKDHFSKIVVDAVLS 564
A++ AI+ ++ A IDN S P + R L A T +SSK++ Q K+HF+++ VDAVL
Sbjct: 128 IATKTAIDALR--ASSIDNSSDPAKFRSDLENIARTTLSSKILSQNKNHFAQLAVDAVLR 185
Query: 565 LDTPLLPLDMIGIKKVPGGALEDSFLVPGVAFKKLSVTLAFECXR 699
L LD I I K+ GG L+DSFL G K T+ C +
Sbjct: 186 LKGS-TNLDNIQIIKILGGKLDDSFLDEGFILNK---TIGVNCPK 226
>SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subunit
Cct1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 556
Score = 150 bits (364), Expect = 2e-37
Identities = 86/230 (37%), Positives = 133/230 (57%), Gaps = 7/230 (3%)
Frame = +1
Query: 49 DQTQGKPQLVSNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDIIH 228
++ G+ N+ A + + V+++LGP G+DK++VD G ++NDGATI+ LLD+ H
Sbjct: 15 EKISGEDVRNQNVLATTAIANVVKSSLGPVGLDKMLVDDIGDVTVTNDGATILSLLDVEH 74
Query: 229 PAAKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAI 408
PA K LV++A+ QD EVGDGTTSVVI+A E+L+R V+ +HP +I R A R A+
Sbjct: 75 PAGKVLVELAQQQDKEVGDGTTSVVIIAAELLRRANELVKNKIHPTTIITGYRLAIREAV 134
Query: 409 EKIKE-QAVKIDNKSPEEQRDLLLKCASTAMSSKLIHQQKDHFSKIVVDAVLSLDT---- 573
+ + + + +D+ E L+ A T+MSSK+I D FS + VDA+LS+ T
Sbjct: 135 KFMTDVLSCSVDSLGKES----LINVAKTSMSSKIIGNDSDFFSTMAVDAMLSVKTSNSK 190
Query: 574 --PLLPLDMIGIKKVPGGALEDSFLVPGVAFKKLSVTLAFECXRRHTKTA 717
P+ + I K G + +S LV G A L+ T+A + + + A
Sbjct: 191 GETRYPVKAVNILKAHGKSSRESVLVKGYA---LNCTIASQAMKTRVQNA 237
>SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subunit
Cct5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 546
Score = 148 bits (359), Expect = 7e-37
Identities = 78/213 (36%), Positives = 133/213 (62%), Gaps = 3/213 (1%)
Frame = +1
Query: 37 REGTDQTQGKPQLVSNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLL 216
+E + G + S+I A + V + VRT+LGPRG+DK+++ +G+ ++NDGATI+ +
Sbjct: 24 QEKKRRLHGIDAVKSHILATKTVANIVRTSLGPRGLDKILISPDGEITVTNDGATILDQM 83
Query: 217 DIIHPAAKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTAS 396
++ H AK LV ++KSQD E+GDGTT VV+LAG +L++ + +++G+HP + A
Sbjct: 84 EVEHQIAKLLVQLSKSQDDEIGDGTTGVVVLAGALLEQAEALIDKGIHPIRIADGYEKAC 143
Query: 397 RLAIEKIKEQAVKIDNKSPEEQRDLLLKCASTAMSSKLIHQQKDHFSKIVVDAVLS---L 567
++A++ + + +D SPE + L + A T++ SK++ + DHF+ I VDAVLS L
Sbjct: 144 QVAVKHLDAISDVVD-FSPENTTN-LFRSAKTSLGSKVVSKAHDHFANIAVDAVLSVADL 201
Query: 568 DTPLLPLDMIGIKKVPGGALEDSFLVPGVAFKK 666
+ ++I + GG+++D+ LV GV K
Sbjct: 202 QRKDVDFELIKVDGKVGGSVDDTKLVKGVVVDK 234
>SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit
Cct3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 528
Score = 144 bits (350), Expect = 9e-36
Identities = 79/224 (35%), Positives = 128/224 (57%), Gaps = 6/224 (2%)
Frame = +1
Query: 13 MQPQILLLREGTDQTQGKPQLVSNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISND 192
MQ + ++ ++ G +SNI A + V D +RT LGPR M K+++D G +++ND
Sbjct: 1 MQSPVFVMNTNGNRQVGHKAQMSNIQAAKAVADVIRTCLGPRAMLKMLLDPVGSVLLTND 60
Query: 193 GATIMKLLDIIHPAAKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVL 372
G I++ +++ HPAAK+++++A++QD EVGDGTTSV+ILAGEIL P ++ +HP V+
Sbjct: 61 GHAILREIEVAHPAAKSMIELARTQDEEVGDGTTSVIILAGEILAAASPLLDRKIHPVVM 120
Query: 373 IRAVRTASRLAIEKIKEQAVKIDNKSPEEQRDLLLKCASTAMSSKLIHQQKD---HFSKI 543
IR+ + A A+ I E + ++ E L+ C T KL+ + D H +
Sbjct: 121 IRSFKQALEDALSIIDEITLPVNVDDNAEMFRLIRTCIGT----KLVARWSDLMCHLALR 176
Query: 544 VVDAVLSLDTPLLPLDM---IGIKKVPGGALEDSFLVPGVAFKK 666
V V S + +D+ ++KVPGG +E S ++ GV K
Sbjct: 177 AVRTVASTSNGRMEIDIKRYARVEKVPGGEIESSCVLDGVMLNK 220
>SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit
Cct8 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 546
Score = 118 bits (283), Expect = 1e-27
Identities = 71/217 (32%), Positives = 123/217 (56%), Gaps = 5/217 (2%)
Frame = +1
Query: 31 LLREGTDQTQG-KPQLVSNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIM 207
L REG QG + ++ N NA + + + RT+LGP G +K++V+H + ++ND ATI+
Sbjct: 13 LFREGYRIMQGVEDAVIRNCNAIRELSEITRTSLGPNGKNKIVVNHLQQTFLTNDAATII 72
Query: 208 KLLDIIHPAAKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVR 387
+ L++IHPAAK +VD + Q+ E+GD VV+ GE+L + + + G+ P + +
Sbjct: 73 RELEVIHPAAKLVVDATQQQENELGDAANFVVVFTGELLAKAENMIRMGLTPLEIAKGYE 132
Query: 388 TASRLAIEKIKE-QAVKIDNKSPEEQRDLLLKCASTAMSSKLIHQQKDHFSKIVVDAVLS 564
A +E ++E A KI+ E++ L+K T +SSK + +D S +V A+L+
Sbjct: 133 MALSHTMEVLEEICADKIETVESEKE---LIKAIRTCISSKQ-YGNEDFLSDLVAKAILT 188
Query: 565 L---DTPLLPLDMIGIKKVPGGALEDSFLVPGVAFKK 666
+ D +D I + K+ G +L +S +V G+ F +
Sbjct: 189 VLPKDPSKFNVDNIRVVKIMGSSLYNSQVVKGMVFPR 225
>SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit
Cct6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 535
Score = 110 bits (265), Expect = 2e-25
Identities = 66/210 (31%), Positives = 113/210 (53%), Gaps = 2/210 (0%)
Frame = +1
Query: 31 LLREGTDQTQGKPQLVSNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMK 210
LL + Q L NI+A + D +++ LGP G K++VD G ++ DG ++
Sbjct: 4 LLNPKAESIQRAQALQVNISAAIGLQDVLKSNLGPTGTTKMLVDGAGAIKLTKDGKVLLT 63
Query: 211 LLDIIHPAAKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRT 390
+ I +P A + A +QD GDGTTSV +L GE+LK+ + ++ EG+HP ++
Sbjct: 64 EMQIQNPTASCIAKAATAQDDATGDGTTSVCLLVGELLKQAELYIREGLHPSLISDGFNL 123
Query: 391 ASRLAIEKIKEQAVKIDNKSPEEQRDLLLKCASTAMSSKLIHQQKDHFSKIVVDAVLSLD 570
A A+ + + K D E R++LL A T++S+K+ + + + VVDA+L++
Sbjct: 124 AKNEALTFL--DSFKTDF---EVDREVLLNVAKTSLSTKISSKVVESLAPAVVDAILTIR 178
Query: 571 TPLLPLD--MIGIKKVPGGALEDSFLVPGV 654
P P+D M+ I K+ + D+ L+ G+
Sbjct: 179 RPDEPIDLHMVEIMKMQNRSASDTQLIRGL 208
>SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein
Hsp60|Schizosaccharomyces pombe|chr 1|||Manual
Length = 582
Score = 51.2 bits (117), Expect = 2e-07
Identities = 37/120 (30%), Positives = 56/120 (46%), Gaps = 4/120 (3%)
Frame = +1
Query: 112 AVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDIIHP----AAKTLVDIAKSQDAEV 279
AV TLGP+G + LI G I+ DG T+ + + + A+ + D+A +
Sbjct: 57 AVSVTLGPKGRNVLIDQPFGSPKITKDGVTVARSVSLKDKFENLGARLVQDVASKTNEVA 116
Query: 280 GDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVKIDNKSPEE 459
GDGTT+ +L I V G +P L R ++ A +E + QA K D + EE
Sbjct: 117 GDGTTTATVLTRAIFSETVRNVAAGCNPMDLRRGIQLAVDNVVEFL--QANKRDITTSEE 174
>SPBC3E7.01 |fab1|ste12,
SPBC6B1.11c|1-phosphatidylinositol-3-phosphate 5-kinase
Fab1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 1932
Score = 36.7 bits (81), Expect = 0.004
Identities = 16/41 (39%), Positives = 26/41 (63%)
Frame = +1
Query: 595 IGIKKVPGGALEDSFLVPGVAFKKLSVTLAFECXRRHTKTA 717
+ IKK+PGG+++D FLV GV F K + + + + R + A
Sbjct: 525 VKIKKIPGGSIQDCFLVNGVLFSKKASSKSMDRSLRRPRIA 565
>SPAC2F3.16 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 425
Score = 29.9 bits (64), Expect = 0.40
Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Frame = +3
Query: 102 CCRCGQNHPGSPWYGQA-DCRSQWKGGYIKRWCNDHEATGYHSPCR*DSCGYCKVSRCRG 278
C C + P + + +C ++ K W +D + YH C D CG C++ R G
Sbjct: 184 CMICSKVQPAAQYCKYCKNCMGRYYCNKCKLWDDDPNKSSYH--C--DDCGICRIGRGLG 239
Query: 279 WRWNH 293
+ H
Sbjct: 240 DDYFH 244
>SPAC328.06 |ubp2||ubiquitin C-terminal hydrolase
Ubp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1141
Score = 28.3 bits (60), Expect = 1.2
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Frame = +1
Query: 457 EQRDLL---LKCASTAMSSKLIHQQKDHFSKIVVDAVLSLDTPL 579
EQ D L LKC +S+LI +H + + V SLDTP+
Sbjct: 571 EQSDTLRAALKCIGEVRNSRLITHYLEHGNLDIPPEVSSLDTPI 614
>SPAC30C2.07 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 27.9 bits (59), Expect = 1.6
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -1
Query: 609 LFDSNHVERQKWSVQRQDSINNNLREVV 526
LFDSNHV+ QK +DS N L +++
Sbjct: 56 LFDSNHVDGQKGDSVLRDSANAPLTDLM 83
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 27.9 bits (59), Expect = 1.6
Identities = 22/100 (22%), Positives = 39/100 (39%)
Frame = +1
Query: 46 TDQTQGKPQLVSNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDII 225
T T + SN N+ LV D + P + + + + N A+ + +L+
Sbjct: 218 TTSTNTSTVIPSNPNSVFLV-DCTHSQC-PTDLPNIATTQHSLRYLDNASASAITVLERT 275
Query: 226 HPAAKTLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFV 345
HPAA + + S + D + + + K PFV
Sbjct: 276 HPAASSTMATESSHQSPSADSQAEELSKSQRVAKDDDPFV 315
>SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase
Tor2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2337
Score = 26.6 bits (56), Expect = 3.8
Identities = 11/48 (22%), Positives = 23/48 (47%)
Frame = +1
Query: 430 VKIDNKSPEEQRDLLLKCASTAMSSKLIHQQKDHFSKIVVDAVLSLDT 573
V ++N PE ++ + C+ ++ Q DH ++V + + L T
Sbjct: 486 VYLENNDPEVRKTASITCSQLFARDPILSQTSDHAIQVVAEVLEKLLT 533
>SPAC23C11.15 |pst2||Clr6 histone deacetylase complex subunit
Pst2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1075
Score = 26.6 bits (56), Expect = 3.8
Identities = 12/59 (20%), Positives = 26/59 (44%)
Frame = -1
Query: 705 MSSXAFKSQRN*KFLESHTRYQERVFKSSTGNLFDSNHVERQKWSVQRQDSINNNLREV 529
+S + S+ + ++ T Y+E + K H+E W+++ I N + E+
Sbjct: 369 VSHPTWASEESGFIVQRKTPYEEAMTKLEEERYEFDRHIEATSWTIKSLKKIQNRINEL 427
>SPAC1250.01 |snf21|SPAC29A4.21|ATP-dependent DNA helicase
Snf21|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1199
Score = 26.2 bits (55), Expect = 5.0
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +1
Query: 346 EEGVHPRVLIRAVRTASRLAIEKIKEQAVKIDNKSPEEQRDLLLK 480
E+ V +L RA +L I+ QA K DNKS E+R+ L+
Sbjct: 863 EKSVEENILARA---QYKLDIDGKVIQAGKFDNKSTPEEREAFLR 904
>SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase
Snf22|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1680
Score = 25.8 bits (54), Expect = 6.6
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +1
Query: 331 LKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVKIDNKSPEEQRDLLLK 480
L+ E+ + +L RA +L ++ QA K DNKS E+R+ L+
Sbjct: 1309 LRLITEKSIEENILSRA---QYKLDLDGKVIQAGKFDNKSTPEEREAFLR 1355
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 25.8 bits (54), Expect = 6.6
Identities = 16/56 (28%), Positives = 31/56 (55%)
Frame = -2
Query: 413 FSMASLDAVLTALIRTRG*TPSSTNGFNLFRISPANITTEVVPSPTSAS*DFAIST 246
F+ + + +T+L+ + SS++ +L S A +T+ SPTS+S A+S+
Sbjct: 71 FTSPASSSFITSLVSSSS-QQSSSSSASLTSSSSATLTSSSSASPTSSSSSHALSS 125
>SPCC2H8.02 |||inorganic phosphate transporter|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 583
Score = 25.8 bits (54), Expect = 6.6
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = -2
Query: 686 KASVTESFLKATPGTRNESSRAPPGTFLIPIMSRGRSGVSKDRTASTTILE 534
K S+T F ++P T + S + PG+ I + + R STT +E
Sbjct: 279 KESLTAEFTTSSPSTASLSDKKNPGSVHIRPNNEVAPSSAPSRAPSTTSVE 329
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 25.8 bits (54), Expect = 6.6
Identities = 25/86 (29%), Positives = 43/86 (50%)
Frame = -2
Query: 356 TPSSTNGFNLFRISPANITTEVVPSPTSAS*DFAISTRVLAAG*MISSSFMIVAPSFDIT 177
T SST ++ ++ + PTS+S DF+ S +++G ISSS + +F
Sbjct: 521 TSSSTPSSSIISSPMTSVLSSSSSIPTSSSSDFSSSITTISSG--ISSS--SIPSTFSSV 576
Query: 176 AFPL*STISLSIPRGPRVVLTASTTS 99
+ L S S S P + +++S+TS
Sbjct: 577 SSILSS--STSSPSSTSLSISSSSTS 600
>SPBC582.07c |rpn7||19S proteasome regulatory subunit
Rpn7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 409
Score = 25.4 bits (53), Expect = 8.7
Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Frame = +1
Query: 307 LAGEILKRLKPFVEEG--VHPRVLIRAVRTASRLAIEKIKEQAVKIDNKSPEEQRDLLLK 480
+ G++L++LKP +E+G + ++A + ++I A DLLL
Sbjct: 167 VVGQLLEKLKPLIEKGGDWERKNRLKAYQGIYLMSIRNFSGAA------------DLLLD 214
Query: 481 CASTAMSSKLIHQQKDHFSKIVVDAVLSLD 570
C ST S++L+ D V+ +SLD
Sbjct: 215 CMSTFSSTELL-PYYDVVRYAVISGAISLD 243
>SPBC1604.18c |||vacuolar sorting protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 449
Score = 25.4 bits (53), Expect = 8.7
Identities = 17/64 (26%), Positives = 29/64 (45%)
Frame = +1
Query: 367 VLIRAVRTASRLAIEKIKEQAVKIDNKSPEEQRDLLLKCASTAMSSKLIHQQKDHFSKIV 546
VLI + L +I Q ID DL+ AS A S+ ++++ + S+++
Sbjct: 221 VLIFDSKIIKFLPNSQIDAQLASIDKSIDGSVADLIQARASIAQRSEFLNEELEQLSQVL 280
Query: 547 VDAV 558
AV
Sbjct: 281 NQAV 284
>SPAC11D3.07c |||transcription factor|Schizosaccharomyces pombe|chr
1|||Manual
Length = 603
Score = 25.4 bits (53), Expect = 8.7
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -1
Query: 168 IVIYNQLVHTTGTQGGSDRIDNKL 97
++I+N LVH T T+ S+ + N L
Sbjct: 503 LIIFNNLVHETDTETDSETLLNDL 526
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,139,368
Number of Sequences: 5004
Number of extensions: 65264
Number of successful extensions: 219
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 199
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 212
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 357280532
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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