BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brP-0906 (750 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 11_04_0234 + 15187065-15188241,15188316-15188494 51 1e-06 04_03_0649 - 18402976-18403220,18403305-18404499 45 7e-05 07_03_1783 + 29480987-29481165,29481526-29481685,29481767-294818... 34 0.14 10_08_0009 + 14075929-14076789 33 0.24 01_01_1161 + 9244628-9245748,9247696-9247828,9248233-9248448,924... 29 3.0 01_05_0553 + 23185473-23186188,23187096-23187101,23187230-231873... 29 3.9 06_03_0378 + 20070955-20071354,20071483-20072132 28 6.9 03_01_0436 + 3384526-3385236,3387857-3388720 28 6.9 11_01_0517 - 4052825-4052884,4053043-4053120,4053784-4053881,405... 28 9.1 >11_04_0234 + 15187065-15188241,15188316-15188494 Length = 451 Score = 50.8 bits (116), Expect = 1e-06 Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 4/68 (5%) Frame = +1 Query: 298 TSLKAKYPGLTV--LLSVGGDADTEEPEK--YNLLLESQQARTAFINSGVLLAEQYGFDG 465 +S+K+ G V +LS+G D E+ ++ + + R AFINS + LA GFDG Sbjct: 98 SSIKSSGGGFAVKTILSIGTDEFREDVSNAAFSRMASEKNLRRAFINSSIELARANGFDG 157 Query: 466 IDLAWQFP 489 +DLAW+FP Sbjct: 158 LDLAWRFP 165 >04_03_0649 - 18402976-18403220,18403305-18404499 Length = 479 Score = 44.8 bits (101), Expect = 7e-05 Identities = 37/130 (28%), Positives = 56/130 (43%), Gaps = 9/130 (6%) Frame = +1 Query: 127 YVRESQARMLPLDLDPALSFCTHLLYGYAGIQPDTYKLVSLNENLDIDRTHDNYRAITSL 306 Y + A + PL A S THL Y + P L+ + D RA+ Sbjct: 45 YYLAADAHLRPLAALDA-SMYTHLYYYAVAVHPARRTLLLPPDPAAASLLGDFSRAV--- 100 Query: 307 KAKYPGLTVLLSVGGD---------ADTEEPEKYNLLLESQQARTAFINSGVLLAEQYGF 459 KAK + +LS+G A + + + +R AFI + V +A + GF Sbjct: 101 KAKNAAVKTVLSIGRGGGAGGAAAVAGSGSDPAFAAMAADPASRAAFIGAAVKVARENGF 160 Query: 460 DGIDLAWQFP 489 DG+D+AW+FP Sbjct: 161 DGLDVAWRFP 170 >07_03_1783 + 29480987-29481165,29481526-29481685,29481767-29481862, 29481948-29482062,29482175-29482337,29482536-29482707, 29483924-29484013,29484137-29484598,29484675-29485268, 29485486-29485554,29485810-29485902,29486432-29486677, 29487277-29487417,29487748-29487828,29487911-29487973, 29488059-29488166,29488303-29488383,29488474-29488521, 29488979-29489053,29489973-29490068,29490156-29490236, 29490295-29490402,29490989-29491033,29491119-29491202, 29491379-29491482,29491581-29491728 Length = 1233 Score = 33.9 bits (74), Expect = 0.14 Identities = 18/48 (37%), Positives = 25/48 (52%) Frame = +1 Query: 157 PLDLDPALSFCTHLLYGYAGIQPDTYKLVSLNENLDIDRTHDNYRAIT 300 PL+LDP H+L Y + TY LV + +D HDNY+ I+ Sbjct: 679 PLELDPWELLQKHVLSDYVNNENATY-LVDWQRKIILDNYHDNYKNIS 725 >10_08_0009 + 14075929-14076789 Length = 286 Score = 33.1 bits (72), Expect = 0.24 Identities = 19/68 (27%), Positives = 36/68 (52%), Gaps = 4/68 (5%) Frame = +1 Query: 292 AITSLKAKYPGLTVLLSVGGDADTEEPEKYNLLLESQQARTAFINSGVL----LAEQYGF 459 A+ + KA +P L+V+L++GGD T + N + A++ + L + YG Sbjct: 70 AVAAAKAAHPNLSVILALGGD--TVQNTGVNATFAPTSSVDAWVRNAADSVSGLIDAYGL 127 Query: 460 DGIDLAWQ 483 DG+D+ ++ Sbjct: 128 DGVDVDYE 135 >01_01_1161 + 9244628-9245748,9247696-9247828,9248233-9248448, 9249802-9249957,9250788-9250979,9251118-9251234, 9251822-9252193 Length = 768 Score = 29.5 bits (63), Expect = 3.0 Identities = 23/97 (23%), Positives = 41/97 (42%), Gaps = 3/97 (3%) Frame = +1 Query: 349 GDADTEEPEKYNLLLESQQARTAFINSGVLLAEQYGFDGIDLAWQFPRVKPKKIRSTWGS 528 G + TE Y A +I SG ++ Q G D + W+ + + + W Sbjct: 431 GGSPTELITSYTESTGRPPALPRWITSGAVVGMQGGTDAVRRVWKQLQDHDVPVSAFWLQ 490 Query: 529 LWHGIKKTFGTTPV---DEKESEHREGFTXLGRELKQ 630 W G +KT + + E + +H G+ L R+L++ Sbjct: 491 DWVGQRKTSIGSQLWWNWEVDDDHYAGWNDLVRDLRR 527 >01_05_0553 + 23185473-23186188,23187096-23187101,23187230-23187374, 23187887-23188159,23188275-23188338,23188479-23188744, 23188951-23189045,23189544-23189718,23190669-23191063, 23191830-23191953,23192864-23192959,23193049-23193120, 23194687-23194824,23195369-23195549,23195602-23195963, 23196944-23197386,23197461-23197763,23197857-23198081, 23198260-23198350,23198702-23198779,23198939-23199229, 23199316-23199513,23199681-23200163,23200488-23200562, 23201163-23201324,23201400-23201729,23201816-23201916, 23202477-23202581,23202931-23203162,23203913-23204257, 23204346-23204447,23206010-23206153,23206463-23206551, 23206979-23207061,23207172-23207287,23207824-23207909, 23208461-23208560,23209270-23209335 Length = 2451 Score = 29.1 bits (62), Expect = 3.9 Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 3/57 (5%) Frame = -1 Query: 579 LLIDWRGAECLLNSMPKRSPGRA---DLLRLNSWELPGEVNSIETILFSQQHSGINE 418 LL D R + L++ KR+ G D+ RLNSW L V S+ + Q+ S ++E Sbjct: 1503 LLPDLRSKQLLVHFFLKRTVGNLSDDDVARLNSWALGLRVLSLLPLPSQQRCSSLHE 1559 >06_03_0378 + 20070955-20071354,20071483-20072132 Length = 349 Score = 28.3 bits (60), Expect = 6.9 Identities = 15/68 (22%), Positives = 33/68 (48%), Gaps = 2/68 (2%) Frame = +1 Query: 484 FPRVKPKKIRSTW--GSLWHGIKKTFGTTPVDEKESEHREGFTXLGRELKQALIHKPKMQ 657 FPR++ + + + W G+ + + T + EKE H + LG + + + + K+ Sbjct: 203 FPRIQDNNMHQEYIVQAPWGGLLRIYRTVDILEKEQRHNQVVRTLGFRVYRVSLDEQKL- 261 Query: 658 LGVTGFAQ 681 + +TG + Sbjct: 262 VRMTGIGE 269 >03_01_0436 + 3384526-3385236,3387857-3388720 Length = 524 Score = 28.3 bits (60), Expect = 6.9 Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 2/58 (3%) Frame = +1 Query: 175 ALSFCTHLLYGYAGIQPDTYKLVSLNENLDIDRTHDNYR--AITSLKAKYPGLTVLLS 342 A+ HLL +A +TY LV EN+ ++ NYR +T+ + G VLLS Sbjct: 228 AIDLAKHLLQVHA----ETYALVVSTENITLNAYMGNYRPMLVTNTLFRMGGAAVLLS 281 >11_01_0517 - 4052825-4052884,4053043-4053120,4053784-4053881, 4054164-4054242,4054482-4054562 Length = 131 Score = 27.9 bits (59), Expect = 9.1 Identities = 11/21 (52%), Positives = 14/21 (66%) Frame = +1 Query: 553 FGTTPVDEKESEHREGFTXLG 615 F + P+DEKE+ HRE LG Sbjct: 103 FQSAPIDEKEASHREVSNLLG 123 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 20,674,177 Number of Sequences: 37544 Number of extensions: 439147 Number of successful extensions: 1233 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 1190 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1232 length of database: 14,793,348 effective HSP length: 80 effective length of database: 11,789,828 effective search space used: 1992480932 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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