Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0901
         (450 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    23   1.0  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    23   1.0  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    20   9.4  

>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 23.4 bits (48), Expect = 1.0
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -2

Query: 233 RWFITNNMFSYTKCFDRYLSMKIW 162
           ++ I N + S T CF   L ++IW
Sbjct: 157 QYHICNTVISATVCFMMLLMLEIW 180


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 23.4 bits (48), Expect = 1.0
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -2

Query: 233 RWFITNNMFSYTKCFDRYLSMKIW 162
           ++ I N + S T CF   L ++IW
Sbjct: 153 QYHICNTVISATVCFMMLLMLEIW 176


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 10/41 (24%), Positives = 17/41 (41%)
 Frame = +3

Query: 156  CAPNLHAQISVKALGIGKHVVCDKPAGLCQAEALKMARAAQ 278
            CAP LH   +       +   CD  + +   + +  A+ AQ
Sbjct: 1307 CAPGLHWDNNKNICDWPEKATCDGTSNVNVVDIVTTAKPAQ 1347


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,643
Number of Sequences: 336
Number of extensions: 2074
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10195961
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)