Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0901
         (450 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ278310-1|CAB93496.1|  219|Anopheles gambiae serine protease-li...    27   0.31 
AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    25   1.2  
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    25   1.2  
AJ438610-7|CAD27479.1|   86|Anopheles gambiae hypothetical prote...    23   5.0  
AF364132-1|AAL35508.1|  397|Anopheles gambiae putative odorant r...    23   6.6  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    22   8.7  

>AJ278310-1|CAB93496.1|  219|Anopheles gambiae serine protease-like
           protein protein.
          Length = 219

 Score = 27.1 bits (57), Expect = 0.31
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +3

Query: 39  WGITLQEAEIAAKELKIPFFTNKIDDVLLKKNVS 140
           WGI   E  I    + +P F   IDD L ++N++
Sbjct: 179 WGIGCGEDGIPGVYVNVPMFRGWIDDHLRQRNIT 212


>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 25.0 bits (52), Expect = 1.2
 Identities = 11/44 (25%), Positives = 23/44 (52%)
 Frame = +3

Query: 21  FSVEAIWGITLQEAEIAAKELKIPFFTNKIDDVLLKKNVSLVFI 152
           F +  +  +T  E ++    ++     N  D+V  K+N++LV+I
Sbjct: 428 FEISYVPDLTTAELQVGRFGIRETLLDNVKDEVYAKENLALVYI 471


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 25.0 bits (52), Expect = 1.2
 Identities = 11/44 (25%), Positives = 23/44 (52%)
 Frame = +3

Query: 21  FSVEAIWGITLQEAEIAAKELKIPFFTNKIDDVLLKKNVSLVFI 152
           F +  +  +T  E ++    ++     N  D+V  K+N++LV+I
Sbjct: 428 FEISYVPDLTTAELQVGRFGIRETLLDNVKDEVYAKENLALVYI 471


>AJ438610-7|CAD27479.1|   86|Anopheles gambiae hypothetical protein
           protein.
          Length = 86

 Score = 23.0 bits (47), Expect = 5.0
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +3

Query: 288 TLISIVNHSLRFLPAFTHMRKCIQEGY 368
           T++SI +   + LP  TH     ++GY
Sbjct: 15  TIVSIADGPTQKLPCVTHSNDDYEDGY 41


>AF364132-1|AAL35508.1|  397|Anopheles gambiae putative odorant
           receptor Or4 protein.
          Length = 397

 Score = 22.6 bits (46), Expect = 6.6
 Identities = 16/53 (30%), Positives = 25/53 (47%)
 Frame = -2

Query: 191 FDRYLSMKIWGTNYEN*THILLEKDVVNFVCEERNFKFFCGYLCFLQSYTPYC 33
           F ++L +K +    EN T +   +D + FV         CGY+C L+  T  C
Sbjct: 166 FVQHLEVKFYWL--ENRTSV---EDYITFVLIMLPVVVMCGYVCNLKVMTICC 213


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 22.2 bits (45), Expect = 8.7
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = +3

Query: 96  FTNKIDDVLLKKNVSLVFIV 155
           F  ++D+VLLK N +L FI+
Sbjct: 786 FKLQLDEVLLKANRTLGFIL 805


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 453,095
Number of Sequences: 2352
Number of extensions: 9420
Number of successful extensions: 15
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 38268990
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)