Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0901
(450 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g20790.1 68416.m02629 oxidoreductase family protein weak simi... 44 6e-05
At4g17370.1 68417.m02604 oxidoreductase family protein weak simi... 33 0.089
At1g34200.1 68414.m04243 oxidoreductase family protein similar t... 33 0.12
At4g09670.1 68417.m01588 oxidoreductase family protein similar t... 31 0.36
At2g29890.1 68415.m03630 villin 1 (VLN1) nearly identical to vil... 30 0.63
At1g19370.1 68414.m02410 expressed protein 30 0.83
At1g66130.1 68414.m07505 oxidoreductase N-terminal domain-contai... 29 1.5
At2g35880.1 68415.m04405 expressed protein 27 4.4
At4g12550.1 68417.m01981 protease inhibitor/seed storage/lipid t... 27 5.9
At3g09780.1 68416.m01161 protein kinase family protein contains ... 27 5.9
>At3g20790.1 68416.m02629 oxidoreductase family protein weak
similarity to SP|Q07982 Glucose--fructose oxidoreductase
precursor (EC 1.1.99.28) {Zymomonas mobilis}; contains
Pfam profiles PF01408: Oxidoreductase family NAD-binding
Rossmann fold, PF02894: Oxidoreductase family C-terminal
alpha/beta domain
Length = 355
Score = 43.6 bits (98), Expect = 6e-05
Identities = 38/124 (30%), Positives = 62/124 (50%), Gaps = 12/124 (9%)
Frame = +3
Query: 27 VEAIWGITLQEA----EIAAK---ELKIPFFTNKIDDVLLKKNVSLVFIVCAPNLHAQIS 185
++AIW T + A EIA K E+K + +++++ ++ V +V A ++S
Sbjct: 35 LKAIWSRTEESAKGAVEIARKHFPEVKCKWGDEGLNEIIQDSSIVGVAVVVAAETMVELS 94
Query: 186 VKALGIGKHVVCDKPAGLCQAE---ALKMAR--AAQYYPTLISIVNHSLRFLPAFTHMRK 350
+K L GKHV+ +KPA +E A+ R +A I V + RF PAF ++K
Sbjct: 95 LKMLKAGKHVLQEKPAAASISEIETAMSSYRNISADSPCRPIWAVAENYRFEPAFVELKK 154
Query: 351 CIQE 362
I E
Sbjct: 155 LIAE 158
>At4g17370.1 68417.m02604 oxidoreductase family protein weak
similarity to SP|P26935 Myo-inositol 2-dehydrogenase (EC
1.1.1.18). {Bacillus subtilis}; contains Pfam profiles
PF01408: Oxidoreductase family NAD-binding Rossmann
fold, PF02894: Oxidoreductase family C-terminal
alpha/beta domain
Length = 368
Score = 33.1 bits (72), Expect = 0.089
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Frame = +3
Query: 120 LLKKNVSLVFIVCAPNL-HAQISVKALGIGK--HVVCDKPAGLCQAEALKMARAAQYYPT 290
LLK + V +V +PN+ H QI + + K HV+ +KP A+ ++ AA+
Sbjct: 72 LLKSELCDVIVVSSPNMTHHQILMDIINYSKPHHVLVEKPLCTTVADCKQVLEAAKKRSD 131
Query: 291 LISIVNHSLRFLP 329
++ V R++P
Sbjct: 132 MVVQVGLEYRYMP 144
>At1g34200.1 68414.m04243 oxidoreductase family protein similar to
AX110P [Daucus carota] GI:285739; contains Pfam profiles
PF01408: Oxidoreductase family NAD-binding Rossmann
fold, PF02894: Oxidoreductase family C-terminal
alpha/beta domain
Length = 352
Score = 32.7 bits (71), Expect = 0.12
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Frame = +3
Query: 48 TLQEAEIAAKELKIPFFT---NKIDDVLLKKNVSLVFIVCAPNLHAQISVKALGIGKHVV 218
+++EA+ AK P T + + +L +V V+ LH + + A GKH++
Sbjct: 41 SIEEAKSFAKSNNFPPNTKLHSSYESLLEDPDVDAVYFPIPTRLHVEWATLAAIKGKHIL 100
Query: 219 CDKPAGLCQAEALKMARAAQ 278
DKP L AE ++ A +
Sbjct: 101 LDKPVALNVAEFDQIVEACE 120
>At4g09670.1 68417.m01588 oxidoreductase family protein similar to
AX110P [Daucus carota] GI:285739; contains Pfam profiles
PF01408: Oxidoreductase family NAD-binding Rossmann
fold, PF02894: Oxidoreductase family C-terminal
alpha/beta domain
Length = 362
Score = 31.1 bits (67), Expect = 0.36
Identities = 13/56 (23%), Positives = 29/56 (51%)
Frame = +3
Query: 111 DDVLLKKNVSLVFIVCAPNLHAQISVKALGIGKHVVCDKPAGLCQAEALKMARAAQ 278
+ +L + +++ +LH + ++KA GKH++ +KP + E K+ A +
Sbjct: 64 ESLLEDPEIDALYVPLPTSLHVEWAIKAAEKGKHILLEKPVAMNVTEFDKIVDACE 119
>At2g29890.1 68415.m03630 villin 1 (VLN1) nearly identical to villin
1 (VLN1) [Arabidopsis thaliana] GI:3415113
Length = 909
Score = 30.3 bits (65), Expect = 0.63
Identities = 15/61 (24%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +3
Query: 84 KIPFFTNKI--DDVLLKKNVSLVFIVCAPNLHAQISVKALGIGKHVVCDKPAGLCQAEAL 257
++PF + + DDV + S VF+ N Q KA+ + +++ +K G C+ +
Sbjct: 153 EVPFLRSSLNHDDVFILDTASKVFLFAGCNSSTQEKAKAMEVVEYIKDNKHDGRCEVATI 212
Query: 258 K 260
+
Sbjct: 213 E 213
>At1g19370.1 68414.m02410 expressed protein
Length = 605
Score = 29.9 bits (64), Expect = 0.83
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = -2
Query: 218 NNMFSYTKCFDRYLSMKIWG-TNYEN*THILLEKDVVNFVCEERNFKFF 75
N+ + T FD K +G T+ H+LL D++NF C R+ K F
Sbjct: 318 NHSLARTYVFDAAERSKAYGFTSEGEIIHVLLHGDIMNFKCRVRSKKKF 366
>At1g66130.1 68414.m07505 oxidoreductase N-terminal
domain-containing protein similar to AX110P [Daucus
carota] GI:285739; contains Pfam profile PF01408:
Oxidoreductase family NAD-binding Rossmann fold
Length = 364
Score = 29.1 bits (62), Expect = 1.5
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = +3
Query: 111 DDVLLKKNVSLVFIVCAPNLHAQISVKALGIGKHVVCDKPAGLCQAEALKMARAAQY 281
+++L NV V++ A+ +V A KHV+ +KP E K+ A +Y
Sbjct: 65 EELLNDANVDAVYLTMPVTQRARWAVTAAEKKKHVLVEKPPAQDATELEKIVEACEY 121
>At2g35880.1 68415.m04405 expressed protein
Length = 432
Score = 27.5 bits (58), Expect = 4.4
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = -3
Query: 238 SPAGLSQTTCFPIPSALTDI*A*RFGAQTMKTKL 137
SP +SQ++ FP A TDI A T KT L
Sbjct: 89 SPRFMSQSSSFPTKGAYTDITRKSIDATTSKTSL 122
>At4g12550.1 68417.m01981 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to pEARLI
1 (Accession No. L43080): an Arabidopsis member of a
conserved gene family (PGF95-099), Plant Physiol. 109
(4), 1497 (1995); contains Pfam protease inhibitor/seed
storage/LTP family domain PF00234; identical to cDNA
AIR1 mRNA, partial cds GI:3695016
Length = 111
Score = 27.1 bits (57), Expect = 5.9
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +2
Query: 227 TSGTVPS*SIEDGSCSTVLS 286
T+GT P SIE G+C TVL+
Sbjct: 24 TTGTCPKNSIEIGTCVTVLN 43
>At3g09780.1 68416.m01161 protein kinase family protein contains
eukaryotic protein kinase domain, INTERPRO:IPR000719
Length = 775
Score = 27.1 bits (57), Expect = 5.9
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +2
Query: 152 SLCPKSSCSDICQ 190
SLC SSCSDIC+
Sbjct: 410 SLCQNSSCSDICK 422
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,095,707
Number of Sequences: 28952
Number of extensions: 177677
Number of successful extensions: 396
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 393
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 396
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 732537840
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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