Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0900
         (650 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...    31   0.006
AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...    30   0.014
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    29   0.033
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    23   2.9  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.8  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   8.8  

>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score = 31.5 bits (68), Expect = 0.006
 Identities = 19/32 (59%), Positives = 21/32 (65%)
 Frame = +3

Query: 552 NEPTAAAIALRVLTKRVPGRTKXYXIFDLGGG 647
           NEPTAAAIA   L K+   R +   IFDLGGG
Sbjct: 2   NEPTAAAIAYG-LDKKAE-RERNVLIFDLGGG 31


>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score = 30.3 bits (65), Expect = 0.014
 Identities = 18/32 (56%), Positives = 21/32 (65%)
 Frame = +3

Query: 552 NEPTAAAIALRVLTKRVPGRTKXYXIFDLGGG 647
           NEPTAAAIA   L K+   + +   IFDLGGG
Sbjct: 2   NEPTAAAIAYG-LDKKAE-KERNVLIFDLGGG 31


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 29.1 bits (62), Expect = 0.033
 Identities = 16/32 (50%), Positives = 20/32 (62%)
 Frame = +3

Query: 552 NEPTAAAIALRVLTKRVPGRTKXYXIFDLGGG 647
           NEPTAAAIA  +  K   G  +   ++DLGGG
Sbjct: 2   NEPTAAAIAYGLDKK---GAEQNILVYDLGGG 30


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +3

Query: 90  LPAREGGDHRQRPGQQDH 143
           +P R+  DHR RP +  H
Sbjct: 246 IPIRQCDDHRDRPPRHFH 263


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
          protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -1

Query: 89 TPTQEYVVPRSIPT 48
          TPT + VV R+IP+
Sbjct: 15 TPTDQRVVTRTIPS 28


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -3

Query: 642 RRGQRXSTXSFSQVPFLSKP 583
           +RGQ+    S S V  LSKP
Sbjct: 210 KRGQKSDADSDSDVVNLSKP 229


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,188
Number of Sequences: 336
Number of extensions: 3185
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)