Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0900
(650 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 219 2e-57
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 218 3e-57
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 216 1e-56
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 164 5e-41
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 97 1e-20
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 70 2e-12
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 1e-06
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 42 6e-04
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.20
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 31 0.81
SB_57752| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_34580| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.88) 29 2.5
SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3) 29 2.5
SB_19079| Best HMM Match : LCM (HMM E-Value=6.3e-37) 29 3.3
SB_58645| Best HMM Match : Kelch_1 (HMM E-Value=1.9) 29 3.3
SB_32880| Best HMM Match : rve (HMM E-Value=3.4e-05) 28 7.6
SB_14214| Best HMM Match : AmoC (HMM E-Value=3.2) 28 7.6
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 219 bits (534), Expect = 2e-57
Identities = 99/119 (83%), Positives = 108/119 (90%)
Frame = +1
Query: 31 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 210
M KAPA+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTD ERL+GDAAKNQVA
Sbjct: 1 MTKAPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDEERLVGDAAKNQVA 60
Query: 211 MNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEV 387
MNP NTIFDAKRLIGR+F+D V+ DMKHW FEVV++ G+PK+KV YKGE KTFF EEV
Sbjct: 61 MNPTNTIFDAKRLIGRRFDDPGVKDDMKHWSFEVVNEAGRPKVKVEYKGETKTFFAEEV 119
Score = 76.2 bits (179), Expect = 2e-14
Identities = 37/45 (82%), Positives = 39/45 (86%)
Frame = +2
Query: 395 MVLTKMKETAEAYLGKTVXNAVITVXAYFNDSQRQATKDAGTISG 529
MVL KMKETAEAYLG V +AV+TV AYFNDSQRQATKDAG ISG
Sbjct: 215 MVLNKMKETAEAYLGCKVTDAVVTVPAYFNDSQRQATKDAGVISG 259
Score = 74.1 bits (174), Expect = 9e-14
Identities = 37/53 (69%), Positives = 41/53 (77%)
Frame = +2
Query: 359 KTKPFSPRKSVXMVLTKMKETAEAYLGKTVXNAVITVXAYFNDSQRQATKDAG 517
+TK F + MVL KMKETAEAYLG V +AV+TV AYFNDSQRQATKDAG
Sbjct: 135 ETKTFFAEEISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFNDSQRQATKDAG 187
Score = 44.8 bits (101), Expect(2) = 3e-07
Identities = 26/39 (66%), Positives = 29/39 (74%)
Frame = +3
Query: 531 LNVLRIXNEPTAAAIALRVLTKRVPGRTKXYXIFDLGGG 647
LNVLRI NEPTAAAIA L K+V G+ + IFDLGGG
Sbjct: 260 LNVLRIINEPTAAAIAYG-LDKKV-GQERNVLIFDLGGG 296
Score = 27.1 bits (57), Expect(2) = 3e-07
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +3
Query: 483 MTLKDKPQKMQVPSLALNVLR 545
MT +D+P KMQ+ S+ LN ++
Sbjct: 201 MTPRDRPLKMQISSMVLNKMK 221
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 218 bits (533), Expect = 3e-57
Identities = 98/120 (81%), Positives = 108/120 (90%)
Frame = +1
Query: 31 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 210
MAK PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF+DTERLIGDAAKNQVA
Sbjct: 1 MAKTPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFSDTERLIGDAAKNQVA 60
Query: 211 MNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVS 390
MNP NT+FDAKRLIGRKF+D V DM HWPF V+ +G +PKI+V +KGE K+FFPEE+S
Sbjct: 61 MNPENTVFDAKRLIGRKFDDPVVARDMTHWPFHVIREGERPKIQVEFKGEKKSFFPEEIS 120
Score = 82.2 bits (194), Expect = 3e-16
Identities = 40/55 (72%), Positives = 45/55 (81%)
Frame = +2
Query: 365 KPFSPRKSVXMVLTKMKETAEAYLGKTVXNAVITVXAYFNDSQRQATKDAGTISG 529
K F P + MVLTKMKETAEAYLG V +AV+TV AYF+DSQRQATKDAGTI+G
Sbjct: 112 KSFFPEEISSMVLTKMKETAEAYLGAKVTDAVVTVPAYFHDSQRQATKDAGTIAG 166
Score = 41.9 bits (94), Expect = 4e-04
Identities = 25/39 (64%), Positives = 28/39 (71%)
Frame = +3
Query: 531 LNVLRIXNEPTAAAIALRVLTKRVPGRTKXYXIFDLGGG 647
LNVLRI NEPTAAAIA L K+V G + I+DLGGG
Sbjct: 167 LNVLRIINEPTAAAIAYG-LDKKV-GVERNVLIYDLGGG 203
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 216 bits (528), Expect = 1e-56
Identities = 97/120 (80%), Positives = 110/120 (91%)
Frame = +1
Query: 31 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 210
M KAPA+GIDLGTTYSCVGVFQ+GKVEIIANDQGNRTTPSYV FTDTERL+GDAAKNQVA
Sbjct: 1 MGKAPAIGIDLGTTYSCVGVFQNGKVEIIANDQGNRTTPSYVGFTDTERLVGDAAKNQVA 60
Query: 211 MNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVS 390
+NP NTIFDAKRLIGR+++DATVQ+DMK WPF+++SD KPKI+V YKGE KTF EE+S
Sbjct: 61 LNPENTIFDAKRLIGRRYDDATVQSDMKLWPFKIISDNNKPKIQVEYKGERKTFAAEEIS 120
Score = 80.6 bits (190), Expect = 1e-15
Identities = 40/55 (72%), Positives = 45/55 (81%)
Frame = +2
Query: 365 KPFSPRKSVXMVLTKMKETAEAYLGKTVXNAVITVXAYFNDSQRQATKDAGTISG 529
K F+ + MVL KMKETAEAYLG+ V +AVITV AYFNDSQRQATKDAGTI+G
Sbjct: 112 KTFAAEEISSMVLGKMKETAEAYLGQKVTSAVITVPAYFNDSQRQATKDAGTIAG 166
Score = 41.9 bits (94), Expect = 4e-04
Identities = 24/39 (61%), Positives = 27/39 (69%)
Frame = +3
Query: 531 LNVLRIXNEPTAAAIALRVLTKRVPGRTKXYXIFDLGGG 647
LNVLR+ NEPTAAA+A L K + G K IFDLGGG
Sbjct: 167 LNVLRVINEPTAAALAYG-LDKSLSGE-KNVLIFDLGGG 203
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 164 bits (399), Expect = 5e-41
Identities = 77/115 (66%), Positives = 93/115 (80%), Gaps = 1/115 (0%)
Frame = +1
Query: 49 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPNN 225
+GIDLGTTYSCVGVF++G+VEIIANDQGNR TPSYVAFT+ ERLIGD AKNQ+ NP N
Sbjct: 704 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTEEGERLIGDGAKNQLTTNPEN 763
Query: 226 TIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVS 390
T+FDAKRLIGR ++D +VQ D+K +PF+VV KP ++V K E KTF EE+S
Sbjct: 764 TVFDAKRLIGRSWDDTSVQNDLKFFPFKVVDKNKKPHVQVKVKDEIKTFAAEEIS 818
Score = 84.2 bits (199), Expect = 8e-17
Identities = 43/73 (58%), Positives = 54/73 (73%), Gaps = 2/73 (2%)
Frame = +2
Query: 317 VMEANLRSR*HIRVKT--KPFSPRKSVXMVLTKMKETAEAYLGKTVXNAVITVXAYFNDS 490
V++ N + ++VK K F+ + MVLTKMKETAEAYLGK V +AV+TV AYFND+
Sbjct: 792 VVDKNKKPHVQVKVKDEIKTFAAEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDA 851
Query: 491 QRQATKDAGTISG 529
QRQATKDAG I+G
Sbjct: 852 QRQATKDAGAIAG 864
Score = 36.3 bits (80), Expect = 0.022
Identities = 21/39 (53%), Positives = 24/39 (61%)
Frame = +3
Query: 531 LNVLRIXNEPTAAAIALRVLTKRVPGRTKXYXIFDLGGG 647
L V+RI NEPTAAAIA + K K +FDLGGG
Sbjct: 865 LTVMRIINEPTAAAIAYGMDKKE---GEKNILVFDLGGG 900
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 97.1 bits (231), Expect = 1e-20
Identities = 50/123 (40%), Positives = 71/123 (57%), Gaps = 3/123 (2%)
Frame = +1
Query: 37 KAPAVGIDLGTTYSCVGVFQ--HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 210
K +GIDLGTTYSCVG +Q G+++I +++ ++ PS VAFTD L+G+ A +Q
Sbjct: 30 KPKIIGIDLGTTYSCVGAYQAISGRIDIFSDENDDKVVPSLVAFTDKGVLVGEKALSQAE 89
Query: 211 MNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSD-GGKPKIKVAYKGEDKTFFPEEV 387
+NP NTI+DAKR IG+ F + K + F V +D G V KG PEE+
Sbjct: 90 INPKNTIYDAKRFIGKTFTKQELLEIGKLYQFRVTTDKRGNAGFLVGKKGNFTVITPEEI 149
Query: 388 SXH 396
+
Sbjct: 150 GGY 152
Score = 33.5 bits (73), Expect = 0.15
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +3
Query: 489 LKDKPQKMQVPSLA-LNVLRIXNEPTAAAIALRVLTKRVPGRTKXYXIFDLGGG 647
+K + ++ SLA + VLR+ NEPTAAA+A + K + DLGGG
Sbjct: 182 IKQRNATVKAASLAGITVLRVINEPTAAALAYGLHKKE---GVANVMVVDLGGG 232
>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
Length = 179
Score = 69.7 bits (163), Expect = 2e-12
Identities = 32/57 (56%), Positives = 44/57 (77%)
Frame = +2
Query: 365 KPFSPRKSVXMVLTKMKETAEAYLGKTVXNAVITVXAYFNDSQRQATKDAGTISGFE 535
+ F+P + +VL ++K AEA+LG+ V AVITV A+FND+QRQATKDAGTI+G +
Sbjct: 11 RSFAPEQISAVVLEQLKADAEAFLGQAVKRAVITVPAHFNDAQRQATKDAGTIAGLD 67
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +3
Query: 537 VLRIXNEPTAAAIA 578
VLRI NEPTAAAIA
Sbjct: 92 VLRIINEPTAAAIA 105
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 50.4 bits (115), Expect = 1e-06
Identities = 26/59 (44%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Frame = +1
Query: 214 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEV 387
N NTI KR IGRKF D VQ ++ H P++VV I+V Y G+ + F PE+V
Sbjct: 118 NLKNTISQFKRFIGRKFSDPAVQKEIPHLPYKVVELPNDSIGIQVQYLGKQEVFSPEQV 176
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/52 (42%), Positives = 33/52 (63%)
Frame = +1
Query: 49 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ 204
VG D+G + V + G +E +AN+ +R TPS+V+ D +RLIG + KNQ
Sbjct: 4 VGFDVGNQSCYIAVARGGGIETVANEFSDRCTPSFVSLGDKQRLIGTSGKNQ 55
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/57 (38%), Positives = 34/57 (59%)
Frame = +2
Query: 359 KTKPFSPRKSVXMVLTKMKETAEAYLGKTVXNAVITVXAYFNDSQRQATKDAGTISG 529
K + FSP + + M+ T++K TAE L V + VI+V +Y+ D QR+ DA +G
Sbjct: 167 KQEVFSPEQVMAMLFTRLKTTAEIALKTKVTDCVISVPSYYTDRQRRCMLDASATAG 223
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 41.5 bits (93), Expect = 6e-04
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +1
Query: 100 GKVEIIANDQGNRTTPSYVAFTDTERLI 183
G IIAND G+R TP+ VAF+DTE+LI
Sbjct: 83 GNTTIIANDAGDRVTPAMVAFSDTEKLI 110
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 33.1 bits (72), Expect = 0.20
Identities = 14/53 (26%), Positives = 28/53 (52%)
Frame = +2
Query: 371 FSPRKSVXMVLTKMKETAEAYLGKTVXNAVITVXAYFNDSQRQATKDAGTISG 529
F+P + + M+L + E + + + V+TV +FN ++R+A A + G
Sbjct: 80 FTPEELMGMILNHSRFIGEQFADHPIKDVVLTVPPFFNQAERRALLRAAELVG 132
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 31.1 bits (67), Expect = 0.81
Identities = 15/25 (60%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
Frame = +1
Query: 109 EIIANDQGNRTTPSYVAFT-DTERL 180
++I N +G+RTTPS VAFT + ERL
Sbjct: 7 KVIENAEGSRTTPSVVAFTPEGERL 31
>SB_57752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 362
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/67 (28%), Positives = 26/67 (38%), Gaps = 1/67 (1%)
Frame = +1
Query: 373 FPEEVSXHGAYENEGNCRSLSWQNCAXCSYHGXRVLQ*LSKTSHKRCRYHLWL*TFCES- 549
F E+V HG CR + WQ V++ + K S C +L C S
Sbjct: 24 FCEQVVYHGIKRKADECRQVEWQFSKHQKALTGHVIKTIDKPSESACETECYLEANCVSI 83
Query: 550 SMNRLLL 570
+ N L L
Sbjct: 84 NFNELYL 90
>SB_34580| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.88)
Length = 953
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Frame = +3
Query: 117 RQRPGQQDHSVLCCVHRHRASHRRCRQEPGG---DEPQQHNIRCQTSHRT*VRRCYCASR 287
RQ + +++ H R +R+ ++ GG +EP + R T T C+CA R
Sbjct: 267 RQSAPSRSMAIINKTHGKRHGYRKLSRDCGGRRPNEPYERTARVHTILSTDTETCFCAKR 326
>SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3)
Length = 350
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = -2
Query: 217 GSSPPGSWRHLR*DARCL*TQHKTEWSCCPGRW 119
GS PPG W R +AR T +T +SC PG W
Sbjct: 206 GSCPPGFWCRKRREARAA-TDLET-YSCPPGFW 236
>SB_19079| Best HMM Match : LCM (HMM E-Value=6.3e-37)
Length = 420
Score = 29.1 bits (62), Expect = 3.3
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -2
Query: 235 RILCCWGSSPPGSWRH 188
R++CC G SP WRH
Sbjct: 395 RVVCCQGDSPSPRWRH 410
>SB_58645| Best HMM Match : Kelch_1 (HMM E-Value=1.9)
Length = 340
Score = 29.1 bits (62), Expect = 3.3
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -2
Query: 235 RILCCWGSSPPGSWRH 188
R++CC G SP WRH
Sbjct: 170 RVVCCQGDSPSPRWRH 185
>SB_32880| Best HMM Match : rve (HMM E-Value=3.4e-05)
Length = 1264
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
Frame = +3
Query: 162 HRHRASHRRCRQEPGG---DEPQQHNIRCQTSHRT*VRRCYCASRHEALA 302
H R +R+ + GG +EP + R T T C+CA R+ + A
Sbjct: 421 HGERHGYRKLSRVCGGRRPNEPYERTARVHTILSTDTETCFCAKRYGSAA 470
>SB_14214| Best HMM Match : AmoC (HMM E-Value=3.2)
Length = 451
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = -1
Query: 299 QCFMSACTVASSNLRPMRRLASNIVLLGFIATWFLAASPMRRSVSVNAT 153
QCF+S C + S + + R+ L TW + + M S +AT
Sbjct: 169 QCFLSVCDLCCSLMTQIPRMRHTWDFLEHAPTWISSQTSMSFSAITDAT 217
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,928,632
Number of Sequences: 59808
Number of extensions: 456825
Number of successful extensions: 1228
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1111
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1225
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1657237625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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