Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0899
         (750 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    23   2.0  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    23   2.0  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    23   2.6  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    23   2.6  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    23   2.6  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    23   3.4  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    22   4.6  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      22   4.6  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   8.0  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   8.0  

>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 8/27 (29%), Positives = 17/27 (62%)
 Frame = -3

Query: 193 DQHYGGDHAQDYTQDWYLFRAFSFLLR 113
           D +YGG ++++   ++YL    ++ LR
Sbjct: 353 DFYYGGPNSENNLDNFYLIHTDTYFLR 379


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 8/27 (29%), Positives = 17/27 (62%)
 Frame = -3

Query: 193 DQHYGGDHAQDYTQDWYLFRAFSFLLR 113
           D +YGG ++++   ++YL    ++ LR
Sbjct: 355 DFYYGGPNSENNLDNFYLIHTDTYFLR 381


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +2

Query: 5   EANETLNEHLCSFYDDEDCLYVYVYSYQDT 94
           + NET+      + D +DC Y YV    DT
Sbjct: 174 KVNETVAATHPRYADPDDCQYFYVCINGDT 203


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = -3

Query: 223 HLPQHQQRQPDQHYGGDHAQDY 158
           H+  H Q Q  QH+   H Q +
Sbjct: 166 HMGHHMQEQHPQHHQPHHQQQH 187


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = -3

Query: 223 HLPQHQQRQPDQHYGGDHAQDY 158
           H+  H Q Q  QH+   H Q +
Sbjct: 168 HMGHHMQEQHPQHHQPHHQQQH 189


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -1

Query: 672 WNILPLYSVY*RNIQYISHESNSFSY 595
           + I+PL+ V  +N+Q I  E  SF +
Sbjct: 43  FGIMPLHGVSRKNVQEIRLEWKSFRF 68


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = -1

Query: 213 SINSASPTSTMAAITPRTIPKIGTFLGHSRSFCALMTTFR 94
           +IN  +   T+A I    +  +GTF+G ++ F A++   R
Sbjct: 73  TINFVATFRTIANIILMAVLFLGTFIGRAK-FLAILKQMR 111


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 7/25 (28%), Positives = 16/25 (64%)
 Frame = -3

Query: 187 HYGGDHAQDYTQDWYLFRAFSFLLR 113
           +YGG ++++   ++YL    ++ LR
Sbjct: 355 YYGGPNSENNLDNFYLIHTDTYFLR 379


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = -3

Query: 103 HFPSVLVRIDVHVQTVFVVIETAQ 32
           HF + ++R+D   Q+V + I+T +
Sbjct: 105 HFLNKMIRLDERFQSVGLQIDTVR 128


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 11/49 (22%), Positives = 23/49 (46%)
 Frame = +1

Query: 499  RCWRTSRVALKVCL*RNVVFIFNMCLTVYSFPVGKTIAFMTNVLYISLI 645
            RC+  S++ +   +  N V++F     VY F   + I  +   + I ++
Sbjct: 1114 RCFFPSKIRICWNVLLNCVYLFLCGFCVYEFASDERIKLVIKAIIIMIL 1162


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,450
Number of Sequences: 336
Number of extensions: 3808
Number of successful extensions: 17
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)