Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0899
         (750 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z35604-2|CAA84677.1|  809|Caenorhabditis elegans Hypothetical pr...   113   1e-25
U19744-1|AAA85704.1|  809|Caenorhabditis elegans integrin beta p...   113   1e-25
AF022968-5|AAB69885.2| 1080|Caenorhabditis elegans Adenylyl cycl...    29   2.7  
U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical p...    29   4.7  
Z75711-4|CAB00030.1|  134|Caenorhabditis elegans Hypothetical pr...    28   8.1  
Z66495-13|CAA91278.1|  722|Caenorhabditis elegans Hypothetical p...    28   8.1  
Z35602-3|CAA84672.1|  722|Caenorhabditis elegans Hypothetical pr...    28   8.1  

>Z35604-2|CAA84677.1|  809|Caenorhabditis elegans Hypothetical protein
            ZK1058.2 protein.
          Length = 809

 Score =  113 bits (272), Expect = 1e-25
 Identities = 54/122 (44%), Positives = 69/122 (56%), Gaps = 3/122 (2%)
 Frame = +2

Query: 2    IEANETLNEHL-CSFYDD-EDCLYVYVYSYQD-TRKVVIRAQKERECPKKVPXXXXXXXX 172
            +E    LNE   C F D  +DC + Y+Y Y + T    +  +K ++CP  VP        
Sbjct: 686  VEELPNLNETTPCQFVDPADDCTFYYLYYYDEATDNATVWVRKHKDCPPPVPVLAIVLGV 745

Query: 173  XXXXXXXXXXXXMLWKMATTIHDRREFARFEKERMMAKWDTGENPIYKQATSTFKNPTYA 352
                        +LWK+ T +HDR E+A F  ER+MAKWDT ENPIYKQAT+TFKNP YA
Sbjct: 746  IAGIVILGILLLLLWKLLTVLHDRSEYATFNNERLMAKWDTNENPIYKQATTTFKNPVYA 805

Query: 353  GK 358
            GK
Sbjct: 806  GK 807


>U19744-1|AAA85704.1|  809|Caenorhabditis elegans integrin beta pat-3
            protein.
          Length = 809

 Score =  113 bits (272), Expect = 1e-25
 Identities = 54/122 (44%), Positives = 69/122 (56%), Gaps = 3/122 (2%)
 Frame = +2

Query: 2    IEANETLNEHL-CSFYDD-EDCLYVYVYSYQD-TRKVVIRAQKERECPKKVPXXXXXXXX 172
            +E    LNE   C F D  +DC + Y+Y Y + T    +  +K ++CP  VP        
Sbjct: 686  VEELPNLNETTPCQFVDPADDCTFYYLYYYDEATDNATVWVRKHKDCPPPVPVLAIVLGV 745

Query: 173  XXXXXXXXXXXXMLWKMATTIHDRREFARFEKERMMAKWDTGENPIYKQATSTFKNPTYA 352
                        +LWK+ T +HDR E+A F  ER+MAKWDT ENPIYKQAT+TFKNP YA
Sbjct: 746  IAGIVILGILLLLLWKLLTVLHDRSEYATFNNERLMAKWDTNENPIYKQATTTFKNPVYA 805

Query: 353  GK 358
            GK
Sbjct: 806  GK 807


>AF022968-5|AAB69885.2| 1080|Caenorhabditis elegans Adenylyl cyclase
           protein 2 protein.
          Length = 1080

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 15/45 (33%), Positives = 25/45 (55%)
 Frame = -3

Query: 391 IQKTVYEGTLLFSGVSWILERRRRLLVNRILARIPFGHHTFLFEA 257
           I+K+  EG + F+ + ++      L+   IL R+P+ H  FLF A
Sbjct: 693 IKKSKLEGVMAFNSLIFLPSCVSHLVSVFILYRLPYSHRCFLFFA 737


>U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical
            protein F41G3.12 protein.
          Length = 1483

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -1

Query: 624  ISHESNSFSYRKRIDSKAHIKYKNDISLK 538
            ISHE+   S+++R+DS   I Y   + LK
Sbjct: 1027 ISHENRRISWQRRVDSLQTIAYNVSLELK 1055


>Z75711-4|CAB00030.1|  134|Caenorhabditis elegans Hypothetical
           protein K02B12.6 protein.
          Length = 134

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
 Frame = -3

Query: 283 GHHTFLFEACELASVVYGGGHLPQH-QQRQPDQHYGGDHAQD 161
           G H   +      +  YGG H   + +Q + D ++GGDH  D
Sbjct: 90  GGHNDYYTKYNQYTPYYGGSHQQNYYEQPKHDDYHGGDHHYD 131


>Z66495-13|CAA91278.1|  722|Caenorhabditis elegans Hypothetical
           protein R13G10.4 protein.
          Length = 722

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 22/81 (27%), Positives = 33/81 (40%), Gaps = 1/81 (1%)
 Frame = -3

Query: 271 FLFEACELASVVYGGGHLPQHQQRQPDQHYGGDHAQDYTQDWYLFRAFSFLLRPDDHFPS 92
           FLF   +LA    G  + P    +      G DH Q    + + F+ F   L  D ++ +
Sbjct: 4   FLFAIFQLALGSPGAPNGPNVPLQLTGVRRGLDHVQKLPSEAFSFKLFGKNLAEDGYYFT 63

Query: 91  VLVRI-DVHVQTVFVVIETAQ 32
              R  D H+ TV  V  T +
Sbjct: 64  TATRCEDSHLSTVSTVRATVK 84


>Z35602-3|CAA84672.1|  722|Caenorhabditis elegans Hypothetical
           protein R13G10.4 protein.
          Length = 722

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 22/81 (27%), Positives = 33/81 (40%), Gaps = 1/81 (1%)
 Frame = -3

Query: 271 FLFEACELASVVYGGGHLPQHQQRQPDQHYGGDHAQDYTQDWYLFRAFSFLLRPDDHFPS 92
           FLF   +LA    G  + P    +      G DH Q    + + F+ F   L  D ++ +
Sbjct: 4   FLFAIFQLALGSPGAPNGPNVPLQLTGVRRGLDHVQKLPSEAFSFKLFGKNLAEDGYYFT 63

Query: 91  VLVRI-DVHVQTVFVVIETAQ 32
              R  D H+ TV  V  T +
Sbjct: 64  TATRCEDSHLSTVSTVRATVK 84


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,795,903
Number of Sequences: 27780
Number of extensions: 329088
Number of successful extensions: 981
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 933
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 981
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)