Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0899
(750 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ855483-1|ABH88170.1| 117|Apis mellifera chemosensory protein ... 25 0.76
AJ973398-1|CAJ01445.1| 117|Apis mellifera hypothetical protein ... 25 0.76
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 23 2.3
AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc fi... 23 2.3
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 23 4.0
AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisp... 23 4.0
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 22 5.3
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 22 5.3
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 22 5.3
AF441189-1|AAL73401.1| 134|Apis mellifera ribosomal protein 49 ... 22 5.3
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 21 9.3
>DQ855483-1|ABH88170.1| 117|Apis mellifera chemosensory protein 2
protein.
Length = 117
Score = 25.0 bits (52), Expect = 0.76
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +1
Query: 250 VRTLRKGTYDGQMGYGRESDLQASDVDVQESNLRRKIKVCL 372
+ T+ T +GQ G R SD Q + + LRR++K L
Sbjct: 16 IYTVTAETEEGQSGRSRVSDEQLNMALSDQRYLRRQLKCAL 56
>AJ973398-1|CAJ01445.1| 117|Apis mellifera hypothetical protein
protein.
Length = 117
Score = 25.0 bits (52), Expect = 0.76
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +1
Query: 250 VRTLRKGTYDGQMGYGRESDLQASDVDVQESNLRRKIKVCL 372
+ T+ T +GQ G R SD Q + + LRR++K L
Sbjct: 16 IYTVTAETEEGQSGRSRVSDEQLNMALSDQRYLRRQLKCAL 56
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 23.4 bits (48), Expect = 2.3
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -1
Query: 282 AIIRSFSKRANSRRSCM 232
A+IR+F++ N R SC+
Sbjct: 364 AVIRNFNESENRRNSCL 380
>AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc
finger domain-Z3 isoform protein.
Length = 92
Score = 23.4 bits (48), Expect = 2.3
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -2
Query: 425 IYILSFCIST*NTKNSLRRHTFIFRR 348
+Y+ FC TKNSL H + R
Sbjct: 35 LYVCEFCNRRYRTKNSLTTHKSLQHR 60
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 22.6 bits (46), Expect = 4.0
Identities = 8/27 (29%), Positives = 16/27 (59%)
Frame = -1
Query: 726 QNIIQFRVKITNFYYYYXWNILPLYSV 646
+N++ V ++ FY W+IL + +V
Sbjct: 188 KNVVDIGVDLSEFYTSVEWDILEVPAV 214
>AF388659-3|AAK71993.1| 548|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
Length = 548
Score = 22.6 bits (46), Expect = 4.0
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -1
Query: 294 VSHLAIIRSFSKRANSRRSCMVVAIFHSINSASPTSTMAAITP 166
+S IIRS S+R + R S +V +S SP+ ++ P
Sbjct: 11 LSQRKIIRSRSRRYSKRFSSSIVDRRSPSSSRSPSPSLLTSQP 53
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 22.2 bits (45), Expect = 5.3
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = -3
Query: 142 LFRAFSFLLRPDDHFPSVLVRIDVHVQTVFVVIE 41
L R + +RPD P V +D+ V+++ + E
Sbjct: 13 LLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISE 46
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 22.2 bits (45), Expect = 5.3
Identities = 8/26 (30%), Positives = 15/26 (57%)
Frame = -1
Query: 723 NIIQFRVKITNFYYYYXWNILPLYSV 646
N++ V ++ FY W+IL + +V
Sbjct: 193 NVVDVGVDLSEFYMSVEWDILEVPAV 218
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 22.2 bits (45), Expect = 5.3
Identities = 8/26 (30%), Positives = 15/26 (57%)
Frame = -1
Query: 723 NIIQFRVKITNFYYYYXWNILPLYSV 646
N++ V ++ FY W+IL + +V
Sbjct: 193 NVVDVGVDLSEFYMSVEWDILEVPAV 218
>AF441189-1|AAL73401.1| 134|Apis mellifera ribosomal protein 49
protein.
Length = 134
Score = 22.2 bits (45), Expect = 5.3
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -3
Query: 457 YGARNKDRN*TFTSYHFVLVHKIQK 383
YG+ K R+ T + VLVH +++
Sbjct: 59 YGSNKKTRHMLPTGFRKVLVHNVKE 83
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 21.4 bits (43), Expect = 9.3
Identities = 9/26 (34%), Positives = 12/26 (46%)
Frame = -1
Query: 639 RNIQYISHESNSFSYRKRIDSKAHIK 562
RNI SH F + DSK ++
Sbjct: 3 RNISNYSHHDEKFKQLRNEDSKIDLR 28
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,003
Number of Sequences: 438
Number of extensions: 4030
Number of successful extensions: 20
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23510295
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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