Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0897
         (696 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U49721-1|AAC16108.1|  218|Drosophila melanogaster QM homolog pro...   417   e-117
AY070910-1|AAL48532.1|  218|Drosophila melanogaster RE02339p pro...   417   e-117
AE014296-3758|AAF45440.2|  231|Drosophila melanogaster CG17521-P...   417   e-117
AE014296-3757|AAG22453.3|  237|Drosophila melanogaster CG17521-P...   417   e-117
BT003580-1|AAO39584.1|  197|Drosophila melanogaster LD24589p pro...   307   1e-83
AE013599-129|AAF57296.3|  499|Drosophila melanogaster CG14471-PA...    32   0.86 
AE013599-128|AAM68338.1| 1209|Drosophila melanogaster CG14471-PB...    32   0.86 
AY051653-1|AAK93077.1| 1477|Drosophila melanogaster LD05287p pro...    29   8.0  
AE014297-4107|AAN14107.1| 1477|Drosophila melanogaster CG5954-PB...    29   8.0  
AE014297-4106|AAF56691.1| 1477|Drosophila melanogaster CG5954-PA...    29   8.0  
AE014296-3425|AAF51645.2|  926|Drosophila melanogaster CG3680-PA...    29   8.0  

>U49721-1|AAC16108.1|  218|Drosophila melanogaster QM homolog
           protein.
          Length = 218

 Score =  417 bits (1026), Expect = e-117
 Identities = 186/209 (88%), Positives = 199/209 (95%)
 Frame = +2

Query: 17  CYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQLSSEALEA 196
           CYRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+ATV+DFPLCVHLVSDEYEQLSSEALEA
Sbjct: 8   CYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYEQLSSEALEA 67

Query: 197 GRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVA 376
           GRICCNKYLVK CGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVA
Sbjct: 68  GRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVA 127

Query: 377 RVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERDEFEKLREE 556
           RVRIGQPIMSVRSSDR+KAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYER+ +E+LR++
Sbjct: 128 RVRIGQPIMSVRSSDRYKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERERYEELRDD 187

Query: 557 GRLANDGCIVQYRPEHGPLDAWRKVQAEI 643
            RL  DGC V+YRPEHGP+ AW K Q ++
Sbjct: 188 NRLEPDGCNVKYRPEHGPIAAWEKAQRDV 216


>AY070910-1|AAL48532.1|  218|Drosophila melanogaster RE02339p
           protein.
          Length = 218

 Score =  417 bits (1026), Expect = e-117
 Identities = 186/209 (88%), Positives = 199/209 (95%)
 Frame = +2

Query: 17  CYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQLSSEALEA 196
           CYRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+ATV+DFPLCVHLVSDEYEQLSSEALEA
Sbjct: 8   CYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYEQLSSEALEA 67

Query: 197 GRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVA 376
           GRICCNKYLVK CGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVA
Sbjct: 68  GRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVA 127

Query: 377 RVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERDEFEKLREE 556
           RVRIGQPIMSVRSSDR+KAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYER+ +E+LR++
Sbjct: 128 RVRIGQPIMSVRSSDRYKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERERYEELRDD 187

Query: 557 GRLANDGCIVQYRPEHGPLDAWRKVQAEI 643
            RL  DGC V+YRPEHGP+ AW K Q ++
Sbjct: 188 NRLEPDGCNVKYRPEHGPIAAWEKAQRDV 216


>AE014296-3758|AAF45440.2|  231|Drosophila melanogaster CG17521-PA,
           isoform A protein.
          Length = 231

 Score =  417 bits (1026), Expect = e-117
 Identities = 186/209 (88%), Positives = 199/209 (95%)
 Frame = +2

Query: 17  CYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQLSSEALEA 196
           CYRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+ATV+DFPLCVHLVSDEYEQLSSEALEA
Sbjct: 21  CYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYEQLSSEALEA 80

Query: 197 GRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVA 376
           GRICCNKYLVK CGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVA
Sbjct: 81  GRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVA 140

Query: 377 RVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERDEFEKLREE 556
           RVRIGQPIMSVRSSDR+KAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYER+ +E+LR++
Sbjct: 141 RVRIGQPIMSVRSSDRYKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERERYEELRDD 200

Query: 557 GRLANDGCIVQYRPEHGPLDAWRKVQAEI 643
            RL  DGC V+YRPEHGP+ AW K Q ++
Sbjct: 201 NRLEPDGCNVKYRPEHGPIAAWEKAQRDV 229


>AE014296-3757|AAG22453.3|  237|Drosophila melanogaster CG17521-PB,
           isoform B protein.
          Length = 237

 Score =  417 bits (1026), Expect = e-117
 Identities = 186/209 (88%), Positives = 199/209 (95%)
 Frame = +2

Query: 17  CYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQLSSEALEA 196
           CYRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+ATV+DFPLCVHLVSDEYEQLSSEALEA
Sbjct: 27  CYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYEQLSSEALEA 86

Query: 197 GRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVA 376
           GRICCNKYLVK CGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVA
Sbjct: 87  GRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVA 146

Query: 377 RVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERDEFEKLREE 556
           RVRIGQPIMSVRSSDR+KAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYER+ +E+LR++
Sbjct: 147 RVRIGQPIMSVRSSDRYKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERERYEELRDD 206

Query: 557 GRLANDGCIVQYRPEHGPLDAWRKVQAEI 643
            RL  DGC V+YRPEHGP+ AW K Q ++
Sbjct: 207 NRLEPDGCNVKYRPEHGPIAAWEKAQRDV 235


>BT003580-1|AAO39584.1|  197|Drosophila melanogaster LD24589p
           protein.
          Length = 197

 Score =  307 bits (753), Expect = 1e-83
 Identities = 149/209 (71%), Positives = 165/209 (78%)
 Frame = +2

Query: 17  CYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQLSSEALEA 196
           CYRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+ATV+DFPLCVHLVSDEYEQLSSEALEA
Sbjct: 14  CYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYEQLSSEALEA 73

Query: 197 GRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVA 376
           GRICCNK ++   G D+    MR                          GAFGKPQGTVA
Sbjct: 74  GRICCNK-MLSCAGADRLQTGMR--------------------------GAFGKPQGTVA 106

Query: 377 RVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERDEFEKLREE 556
           RVRIGQPIMSVRSSDR+KAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYER+ +E+LR++
Sbjct: 107 RVRIGQPIMSVRSSDRYKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERERYEELRDD 166

Query: 557 GRLANDGCIVQYRPEHGPLDAWRKVQAEI 643
            RL  DGC V+YRPEHGP+ AW K Q ++
Sbjct: 167 NRLEPDGCNVKYRPEHGPIAAWEKAQRDV 195


>AE013599-129|AAF57296.3|  499|Drosophila melanogaster CG14471-PA,
           isoform A protein.
          Length = 499

 Score = 31.9 bits (69), Expect = 0.86
 Identities = 25/65 (38%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
 Frame = +3

Query: 405 PCALVTGGRHRSSRLCAVPS-SSSPDVKRSTYQRSGVSQSMNVMSLRSCVKRAASLMTAA 581
           P  LV GGR  SS    +PS SS+P+ K +   R  V       SL     R+ SL   A
Sbjct: 297 PACLVGGGREVSSIPMPIPSPSSNPNSKPTPANRPIVGS--EAFSLLPTTARSTSLTETA 354

Query: 582 LCSTA 596
           L  TA
Sbjct: 355 LAKTA 359


>AE013599-128|AAM68338.1| 1209|Drosophila melanogaster CG14471-PB,
           isoform B protein.
          Length = 1209

 Score = 31.9 bits (69), Expect = 0.86
 Identities = 25/65 (38%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
 Frame = +3

Query: 405 PCALVTGGRHRSSRLCAVPS-SSSPDVKRSTYQRSGVSQSMNVMSLRSCVKRAASLMTAA 581
           P  LV GGR  SS    +PS SS+P+ K +   R  V       SL     R+ SL   A
Sbjct: 297 PACLVGGGREVSSIPMPIPSPSSNPNSKPTPANRPIVGS--EAFSLLPTTARSTSLTETA 354

Query: 582 LCSTA 596
           L  TA
Sbjct: 355 LAKTA 359


>AY051653-1|AAK93077.1| 1477|Drosophila melanogaster LD05287p
           protein.
          Length = 1477

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 21/74 (28%), Positives = 33/74 (44%)
 Frame = +3

Query: 399 SCPCALVTGGRHRSSRLCAVPSSSSPDVKRSTYQRSGVSQSMNVMSLRSCVKRAASLMTA 578
           S P ALV G  +   +L   P+ S  D  RST + +   Q+ +   L+  V    ++  A
Sbjct: 257 SNPNALVLGKANHVKKLLTSPNPSGEDKTRSTQKNN--KQNTSASQLKPVVAPKTAMPIA 314

Query: 579 ALCSTARNMDLSTL 620
               TA N  +S +
Sbjct: 315 TEVPTADNNKMSLI 328


>AE014297-4107|AAN14107.1| 1477|Drosophila melanogaster CG5954-PB,
           isoform B protein.
          Length = 1477

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 21/74 (28%), Positives = 33/74 (44%)
 Frame = +3

Query: 399 SCPCALVTGGRHRSSRLCAVPSSSSPDVKRSTYQRSGVSQSMNVMSLRSCVKRAASLMTA 578
           S P ALV G  +   +L   P+ S  D  RST + +   Q+ +   L+  V    ++  A
Sbjct: 257 SNPNALVLGKANHVKKLLTSPNPSGEDKTRSTQKNN--KQNTSASQLKPVVAPKTAMPIA 314

Query: 579 ALCSTARNMDLSTL 620
               TA N  +S +
Sbjct: 315 TEVPTADNNKMSLI 328


>AE014297-4106|AAF56691.1| 1477|Drosophila melanogaster CG5954-PA,
           isoform A protein.
          Length = 1477

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 21/74 (28%), Positives = 33/74 (44%)
 Frame = +3

Query: 399 SCPCALVTGGRHRSSRLCAVPSSSSPDVKRSTYQRSGVSQSMNVMSLRSCVKRAASLMTA 578
           S P ALV G  +   +L   P+ S  D  RST + +   Q+ +   L+  V    ++  A
Sbjct: 257 SNPNALVLGKANHVKKLLTSPNPSGEDKTRSTQKNN--KQNTSASQLKPVVAPKTAMPIA 314

Query: 579 ALCSTARNMDLSTL 620
               TA N  +S +
Sbjct: 315 TEVPTADNNKMSLI 328


>AE014296-3425|AAF51645.2|  926|Drosophila melanogaster CG3680-PA
           protein.
          Length = 926

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 15/47 (31%), Positives = 21/47 (44%)
 Frame = -2

Query: 194 PPKPLSSAVHIRRTPSARTVESRQRSLSSYPNRRYGSWDQVHPDRTS 54
           PPK  S+    +RTP+         + S+   R   SWD V+  R S
Sbjct: 544 PPKKESAQSAAKRTPADSVFTKATANTSARKPRASDSWDYVYKQRAS 590


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,810,860
Number of Sequences: 53049
Number of extensions: 806025
Number of successful extensions: 2531
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2409
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2530
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3046624548
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)