Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0895
         (750 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_50882| Best HMM Match : Metallophos (HMM E-Value=8.00001e-41)      353   7e-98
SB_49199| Best HMM Match : Metallophos (HMM E-Value=2.5e-25)          165   3e-41
SB_31501| Best HMM Match : No HMM Matches (HMM E-Value=.)             142   3e-34
SB_52368| Best HMM Match : No HMM Matches (HMM E-Value=.)             116   3e-26
SB_38314| Best HMM Match : Metallophos (HMM E-Value=5.1e-07)          102   4e-22
SB_56433| Best HMM Match : Metallophos (HMM E-Value=1.7e-15)           83   2e-16
SB_36816| Best HMM Match : No HMM Matches (HMM E-Value=.)              63   3e-10
SB_49265| Best HMM Match : efhand (HMM E-Value=0.68)                   61   1e-09
SB_1044| Best HMM Match : Metallophos (HMM E-Value=5.8e-16)            44   1e-04
SB_10504| Best HMM Match : MBOAT (HMM E-Value=0.16)                    40   0.002
SB_18652| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0)              29   4.0  
SB_42654| Best HMM Match : Tfb4 (HMM E-Value=0.0028)                   29   5.3  
SB_14102| Best HMM Match : Exo_endo_phos (HMM E-Value=0.0024)          29   5.3  
SB_38634| Best HMM Match : DUF164 (HMM E-Value=0.6)                    28   7.0  
SB_3531| Best HMM Match : Cytomega_US3 (HMM E-Value=6.7)               28   9.3  
SB_10885| Best HMM Match : COesterase (HMM E-Value=1.4)                28   9.3  

>SB_50882| Best HMM Match : Metallophos (HMM E-Value=8.00001e-41)
          Length = 293

 Score =  353 bits (869), Expect = 7e-98
 Identities = 156/172 (90%), Positives = 167/172 (97%)
 Frame = +1

Query: 115 DTDELNIDNVIKKLLKVRGEKPGMNVQLTEIEIKGLCLKSREIFLSQPILLELEAPLKIC 294
           + ++LN+D++I +LL+VRG +PG NVQLTE EI+GLCLKSREIFLSQPILLELEAPLKIC
Sbjct: 3   EPEKLNVDSIISRLLEVRGSRPGKNVQLTEAEIRGLCLKSREIFLSQPILLELEAPLKIC 62

Query: 295 GDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLR 474
           GDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLR
Sbjct: 63  GDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLR 122

Query: 475 GNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPVAAIVDEKIFCCHG 630
           GNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPVAAI+DEKIFCCHG
Sbjct: 123 GNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPVAAILDEKIFCCHG 174


>SB_49199| Best HMM Match : Metallophos (HMM E-Value=2.5e-25)
          Length = 173

 Score =  165 bits (401), Expect = 3e-41
 Identities = 74/157 (47%), Positives = 104/157 (66%), Gaps = 1/157 (0%)
 Frame = +1

Query: 196 LTEIEIKGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLF 375
           L E ++K LC    E+ L +  +  + +P+ +CGDIHGQ+YDL  LF  GG  P ++Y+F
Sbjct: 17  LPENDLKKLCDYVCELLLEESNVQPVSSPVTVCGDIHGQFYDLEELFRTGGQVPNTSYVF 76

Query: 376 LGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKL 552
           +GD+VDRG  SLET   LL  K K+P+   LLRGNHE   I ++YGFYDEC+ +Y N   
Sbjct: 77  MGDFVDRGYYSLETFTRLLTLKAKWPDRITLLRGNHESRQITQVYGFYDECQSKYGNANA 136

Query: 553 WKTFTDCFNCLPVAAIVDEKIFCCHGGLSPDLQAMEQ 663
           W+     F+ L VAAI+D ++ C HGGLSPD++ ++Q
Sbjct: 137 WRYCCKVFDLLTVAAIIDGQVLCVHGGLSPDIKTIDQ 173


>SB_31501| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1150

 Score =  142 bits (344), Expect = 3e-34
 Identities = 79/202 (39%), Positives = 113/202 (55%), Gaps = 32/202 (15%)
 Frame = +1

Query: 241 IFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETI 420
           I   +  +LE++AP+ +CGDIHGQ+YDL++LFE GG P  + YLFLGDYVDRG  S+E  
Sbjct: 69  ILRKEKTMLEVDAPITVCGDIHGQFYDLVKLFEVGGSPATTRYLFLGDYVDRGYFSIE-- 126

Query: 421 CLLLAYKIKYPENFFLLRGNHECASINRIYGF---------------------YDECKR- 534
           CL       Y    FLLRGNHEC  +   + F                     Y  C R 
Sbjct: 127 CL-------YTNTLFLLRGNHECRHLTEYFTFKTESANFLDYITAREKMSPKQYINCARV 179

Query: 535 -RYNIKLWK------TFTDC---FNCLPVAAIVDEKIFCCHGGLSPDLQAMEQIRRIMRP 684
             Y +K  K       +  C   F+CLP+AA+++++  C HGGLSP++  ++ ++++ R 
Sbjct: 180 THYTLKSGKIKYSEAVYDACMESFDCLPLAALMNQQFLCVHGGLSPEIHTLDDVKKLDRF 239

Query: 685 TDVPXQGLLCDLLWSDPRQGHG 750
            + P  G +CDLLWSDP + +G
Sbjct: 240 KEPPAFGPMCDLLWSDPLEDYG 261


>SB_52368| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 128

 Score =  116 bits (278), Expect = 3e-26
 Identities = 54/93 (58%), Positives = 71/93 (76%)
 Frame = +1

Query: 127 LNIDNVIKKLLKVRGEKPGMNVQLTEIEIKGLCLKSREIFLSQPILLELEAPLKICGDIH 306
           L++DNVI++LL  + + PG  VQL E +I+ +C  SREIFL QP+LLE+ AP+ I GDIH
Sbjct: 10  LDVDNVIEQLLSYK-KNPGKQVQLPEAQIRQICQVSREIFLQQPMLLEIGAPINIFGDIH 68

Query: 307 GQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQ 405
           GQY DLLR F+  G+PP  +Y+FLGDYVDR K+
Sbjct: 69  GQYEDLLRHFDKLGYPPNESYIFLGDYVDRPKR 101


>SB_38314| Best HMM Match : Metallophos (HMM E-Value=5.1e-07)
          Length = 199

 Score =  102 bits (244), Expect = 4e-22
 Identities = 42/83 (50%), Positives = 62/83 (74%)
 Frame = +1

Query: 193 QLTEIEIKGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYL 372
           QLTE ++K LC K++EI   +  + E++ P+ +CGD+HGQ++DL+ LF  GG  P++NYL
Sbjct: 23  QLTEAQVKTLCEKAKEILSKESNVQEVKCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYL 82

Query: 373 FLGDYVDRGKQSLETICLLLAYK 441
           F+GDYVDRG  S+ET+ LL+  K
Sbjct: 83  FMGDYVDRGYYSVETVTLLVTLK 105



 Score = 27.9 bits (59), Expect = 9.3
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = +1

Query: 691 VPXQGLLCDLLWSDP 735
           V  +G +CDLLWSDP
Sbjct: 102 VTLKGPMCDLLWSDP 116


>SB_56433| Best HMM Match : Metallophos (HMM E-Value=1.7e-15)
          Length = 417

 Score = 83.4 bits (197), Expect = 2e-16
 Identities = 55/140 (39%), Positives = 77/140 (55%), Gaps = 5/140 (3%)
 Frame = +1

Query: 346 GFP-PESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASIN-RIYGFY 519
           G P PE+ Y+F GD VDRG +S+E   +L A+ I YP   ++ RGNHE   +N RI    
Sbjct: 2   GLPSPENPYIFNGDLVDRGPRSIEICIILFAFTILYPNGVYINRGNHEDHIMNLRIIVTK 61

Query: 520 DECKRRY---NIKLWKTFTDCFNCLPVAAIVDEKIFCCHGGLSPDLQAMEQIRRIMRPTD 690
              K +Y     ++ +TF      LP+A IV+ KIF  HGG+S ++  ++ I RI R   
Sbjct: 62  AGGKDQYKDSRSEIIRTFRKYLGWLPLATIVNNKIFVAHGGIS-NITDLDIIERIDRHK- 119

Query: 691 VPXQGLLCDLLWSDPRQGHG 750
                 + DLLWSDP+   G
Sbjct: 120 ------VLDLLWSDPKPTPG 133


>SB_36816| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 204

 Score = 62.9 bits (146), Expect = 3e-10
 Identities = 38/83 (45%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
 Frame = +1

Query: 493 SINRIYGFYDECKRR--YNIKLWKTFTDCFNCLPVAAIVDEKIFCCHGGLSPDLQAMEQI 666
           S+  +  F  E  RR    I+L +  T  F+  P +A    K         P++ +MEQI
Sbjct: 4   SVLGVVNFRREWARRKFLLIQLQQASTAIFDYAPYSACAQRKTLA---NFPPNM-SMEQI 59

Query: 667 RRIMRPTDVPXQGLLCDLLWSDP 735
           RRIMRPTDVP  GLLCDLLWSDP
Sbjct: 60  RRIMRPTDVPDTGLLCDLLWSDP 82


>SB_49265| Best HMM Match : efhand (HMM E-Value=0.68)
          Length = 720

 Score = 60.9 bits (141), Expect = 1e-09
 Identities = 27/69 (39%), Positives = 44/69 (63%), Gaps = 4/69 (5%)
 Frame = +1

Query: 220 LCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLL----RLFEYGGFPPESNYLFLGDY 387
           +C   RE+ + +P +L +++P+ + GD+HG + DL+     L+  G     SN+LFLGDY
Sbjct: 652 VCRSLREVVMEEPRMLRVQSPVYVLGDLHGNFRDLVCFEKLLWRMGPVLTPSNFLFLGDY 711

Query: 388 VDRGKQSLE 414
           VDRG+  +E
Sbjct: 712 VDRGENGVE 720


>SB_1044| Best HMM Match : Metallophos (HMM E-Value=5.8e-16)
          Length = 250

 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 24/66 (36%), Positives = 34/66 (51%)
 Frame = +1

Query: 289 ICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 468
           + GDIHG    L +LFE          +FLGDYVD   +S  TI  L+  +I    +   
Sbjct: 7   VFGDIHGGLRALQQLFERAEITINDKLIFLGDYVDGWSESAATIQFLI--EIAEKHDCIF 64

Query: 469 LRGNHE 486
           ++GNH+
Sbjct: 65  IKGNHD 70


>SB_10504| Best HMM Match : MBOAT (HMM E-Value=0.16)
          Length = 465

 Score = 40.3 bits (90), Expect = 0.002
 Identities = 15/19 (78%), Positives = 17/19 (89%)
 Frame = +1

Query: 679 RPTDVPXQGLLCDLLWSDP 735
           RP DVP +GL+CDLLWSDP
Sbjct: 116 RPMDVPDKGLVCDLLWSDP 134


>SB_18652| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0)
          Length = 725

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 28/105 (26%), Positives = 48/105 (45%), Gaps = 7/105 (6%)
 Frame = +1

Query: 46  SLFFYLFYSTIFRTHTIYPMADRDTDELNIDNVIKKLLKVRGEKPGMNVQLTEIEI---- 213
           SLF  LF   +   H  Y +AD+ T ++N + V    L    +  G+ ++ T I +    
Sbjct: 443 SLFSPLFDKIVEHYHAPYKLADKHTSDMNPEKVTAPNL----DPDGVFIRSTRIRVARNL 498

Query: 214 KGLCLKSREIFLSQPILLELEAPLKIC---GDIHGQYYDLLRLFE 339
           KG  L +  +   +   +E +    +C   GD+ G+YY L  + E
Sbjct: 499 KGYAL-TPGLTRKERNEIEKKVTEVLCSLTGDLAGKYYPLTGMDE 542


>SB_42654| Best HMM Match : Tfb4 (HMM E-Value=0.0028)
          Length = 128

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -3

Query: 430 GAGILFPRTACHGPHSLQGRDSWTPEGSHHTQTTLR 323
           G+  L+P+ +C G  SL  +DS   + S    T LR
Sbjct: 67  GSKFLYPKASCEGIQSLPSQDSKYEKFSEFNDTVLR 102


>SB_14102| Best HMM Match : Exo_endo_phos (HMM E-Value=0.0024)
          Length = 515

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 22/79 (27%), Positives = 36/79 (45%)
 Frame = +1

Query: 355 PESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKR 534
           P   Y+ L D  D  K ++++   +   K+K+ E+F       EC S +  +   +EC R
Sbjct: 405 PSRKYVSLRDTRDHRKVAMDSKSDIS--KLKWAEDFNF-ENPEECDS-DFNFENPEECVR 460

Query: 535 RYNIKLWKTFTDCFNCLPV 591
             N +LW  F     C+ V
Sbjct: 461 TLNDRLWNLFDQSSPCIKV 479


>SB_38634| Best HMM Match : DUF164 (HMM E-Value=0.6)
          Length = 493

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 15/34 (44%), Positives = 21/34 (61%)
 Frame = +1

Query: 391 DRGKQSLETICLLLAYKIKYPENFFLLRGNHECA 492
           D  KQS  T+C+LL Y+ KY E  + +  N EC+
Sbjct: 444 DTTKQSRRTVCMLL-YRAKYIEGCY-ISVNTECS 475


>SB_3531| Best HMM Match : Cytomega_US3 (HMM E-Value=6.7)
          Length = 519

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 6/16 (37%), Positives = 14/16 (87%)
 Frame = +1

Query: 583 LPVAAIVDEKIFCCHG 630
           +P++ ++D+++FCC G
Sbjct: 71  VPISVVLDDRVFCCQG 86


>SB_10885| Best HMM Match : COesterase (HMM E-Value=1.4)
          Length = 195

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +2

Query: 500 IGFMGFTMSAKGGITLNYGRRSQTAS 577
           +G  GF  + K G+T NYG   Q  S
Sbjct: 160 VGIFGFLATGKNGVTGNYGMLDQVKS 185


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,523,920
Number of Sequences: 59808
Number of extensions: 506937
Number of successful extensions: 1488
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1358
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1480
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2034222073
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)