Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0894
(700 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 71 2e-13
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 69 5e-13
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 56 4e-09
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 55 1e-08
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 53 3e-08
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 51 2e-07
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 50 2e-07
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 44 2e-05
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 44 2e-05
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 42 1e-04
SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|ch... 37 0.002
SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr... 36 0.007
SPBP19A11.06 |lid2|SPBP4H10.01|Lid2 complex subunit Lid2 |Schizo... 32 0.091
SPAC343.11c |msc1||multi-copy suppressor of Chk1 |Schizosaccharo... 30 0.28
SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces... 29 0.85
SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3 |Schizosacc... 27 2.0
SPAC732.02c |||fructose-2,6-bisphosphate 2-phosphatase activity ... 27 2.6
SPAC458.07 |tfa1|SPAPYUG7.01|transcription factor TFIIE alpha su... 27 3.4
SPBC609.01 |||ribonuclease II |Schizosaccharomyces pombe|chr 2||... 26 4.5
SPCC553.07c |mug40||DinB translesion DNA repair polymerase|Schiz... 26 4.5
SPCC584.12 |mug42||sequence orphan|Schizosaccharomyces pombe|chr... 26 6.0
SPAC17G8.13c |mst2||histone acetyltransferase Mst2|Schizosacchar... 26 6.0
SPAC19G12.14 |its3||1-phosphatidylinositol-4-phosphate 5-kinase ... 26 6.0
SPAC6B12.08 |mug185||DNAJ domain protein Jjj family|Schizosaccha... 25 7.9
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 70.9 bits (166), Expect = 2e-13
Identities = 36/109 (33%), Positives = 59/109 (54%), Gaps = 6/109 (5%)
Frame = +3
Query: 363 KKEKNHLCQF--CSKTFFKKYHLQVHIRTHTKEKPYECNECGKWFSSKNVLKNHKLIHED 536
K + N++C F C+K F + Y+L+ H+ THT +P++C+ C K F+ ++ + H+ +H
Sbjct: 565 KSQGNYVCTFAGCNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLHTG 624
Query: 537 VKRFACTLCDMSFIXNGYLHAHMLXHKKEKRFEC----QYWGGEVPPLR 671
+K FAC C+ F L+ H +K E C G +VPP R
Sbjct: 625 IKAFACVTCNQRFARMDALNRH---YKSEVGQNCLRTATERGIQVPPSR 670
Score = 44.8 bits (101), Expect = 1e-05
Identities = 24/74 (32%), Positives = 34/74 (45%)
Frame = +3
Query: 222 CGRGFISKSRLDVHMAVHTKDRPHKCSFCIKRFRTKICMQLHERQVHKKEKNHLCQFCSK 401
C + F L HM HT RP +CS C K F + + HE Q+H K C C++
Sbjct: 577 CNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHE-QLHTGIKAFACVTCNQ 635
Query: 402 TFFKKYHLQVHIRT 443
F + L H ++
Sbjct: 636 RFARMDALNRHYKS 649
Score = 41.9 bits (94), Expect = 8e-05
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Frame = +3
Query: 297 CSF--CIKRFRTKICMQLHERQVHKKEKNHLCQFCSKTFFKKYHLQVHIRTHTKEKPYEC 470
C+F C KRF ++ H H + C C K+F +++ + H + HT K + C
Sbjct: 572 CTFAGCNKRFTRAYNLKSH-MNTHTNYRPFQCSICKKSFARQHDKRRHEQLHTGIKAFAC 630
Query: 471 NECGKWFSSKNVLKNH 518
C + F+ + L H
Sbjct: 631 VTCNQRFARMDALNRH 646
Score = 38.7 bits (86), Expect = 8e-04
Identities = 30/111 (27%), Positives = 48/111 (43%), Gaps = 6/111 (5%)
Frame = +3
Query: 33 RPR---VNCHLCEETFSSANSKYKHVRRKHMNIKQNCKICNKAVA---NLKAHILVVHNT 194
RPR +N + ++ +S++SK K + N CNK NLK+H+ +T
Sbjct: 538 RPRSRSLNSLVGNKSENSSSSKAKSESKSQGNYVCTFAGCNKRFTRAYNLKSHMNT--HT 595
Query: 195 ESLPFECIACGRGFISKSRLDVHMAVHTKDRPHKCSFCIKRFRTKICMQLH 347
PF+C C + F + H +HT + C C +RF + H
Sbjct: 596 NYRPFQCSICKKSFARQHDKRRHEQLHTGIKAFACVTCNQRFARMDALNRH 646
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 69.3 bits (162), Expect = 5e-13
Identities = 38/120 (31%), Positives = 60/120 (50%), Gaps = 7/120 (5%)
Frame = +3
Query: 306 CIKRFRTKICMQLHERQVHKKEKNHLCQF--CSKTFFKKYHLQVHIRTHTKEKPYEC--N 473
C K++ ++ H R H E+ +C + CSK F++K HL++H R HT KP+ C +
Sbjct: 30 CGKKYSRPSLLEQHLR-THSNERPFVCDYTGCSKAFYRKSHLKIHKRCHTNVKPFSCHYD 88
Query: 474 ECGKWFSSKNVLKNHKLIHEDVKRFACTL--CDMSFIXNGYLHAHM-LXHKKEKRFECQY 644
C F ++ L+ H +H K +ACT CD F + L +H+ H + C Y
Sbjct: 89 GCDAQFYTQQHLERHIEVHRKPKPYACTWEGCDECFSKHQQLRSHISACHTHLLPYPCTY 148
Score = 60.1 bits (139), Expect = 3e-10
Identities = 57/208 (27%), Positives = 82/208 (39%), Gaps = 21/208 (10%)
Frame = +3
Query: 45 NCHL--CEETFSSANSKYKH--VRRK---HMNIKQNCKICNKAVANLKAHILVVHNTESL 203
+CH C+ F + +H V RK + + C C L++HI H T L
Sbjct: 84 SCHYDGCDAQFYTQQHLERHIEVHRKPKPYACTWEGCDECFSKHQQLRSHISACH-THLL 142
Query: 204 PFECIA--CGRGFISKSRLDVHM-AVHTKDRPHKCSF--CI--KRFRTKICMQLHERQVH 362
P+ C C F +K +L H+ H K + C C+ + F +Q H R+ H
Sbjct: 143 PYPCTYQDCELRFATKQKLQNHVNRAHEKIISYSCPHESCVGHEGFEKWSQLQNHIREAH 202
Query: 363 KKEKNHLCQFCSKTFFKKYHLQVHIRTHT----KEKPYEC--NECGKWFSSKNVLKNH-K 521
C C + F HL+ H+ H + K Y C C K F+ + LK H
Sbjct: 203 VPS----CSICGRQFKTAAHLRHHVVLHQTTLEERKTYHCPMEGCKKSFTRSSALKKHIS 258
Query: 522 LIHEDVKRFACTLCDMSFIXNGYLHAHM 605
+IHE F C C F L H+
Sbjct: 259 VIHEGNMAFHCDSCGTKFGYKHMLQRHL 286
Score = 54.8 bits (126), Expect = 1e-08
Identities = 58/218 (26%), Positives = 92/218 (42%), Gaps = 20/218 (9%)
Frame = +3
Query: 57 CEETFSSANSKYKHVRRKHMNIKQNCKI--CNKAVANLKAHILVVH---NTESLPFECI- 218
C + +S + +H+R C C+KA K+H L +H +T PF C
Sbjct: 30 CGKKYSRPSLLEQHLRTHSNERPFVCDYTGCSKAFYR-KSH-LKIHKRCHTNVKPFSCHY 87
Query: 219 -ACGRGFISKSRLDVHMAVHTKDRPHKCSF--CIKRFRTKICMQLHERQVHKKEKNHLC- 386
C F ++ L+ H+ VH K +P+ C++ C + F ++ H H + C
Sbjct: 88 DGCDAQFYTQQHLERHIEVHRKPKPYACTWEGCDECFSKHQQLRSHISACHTHLLPYPCT 147
Query: 387 -QFCSKTFFKKYHLQVHI-RTHTKEKPYEC--NEC--GKWFSSKNVLKNHKLIHEDVKRF 548
Q C F K LQ H+ R H K Y C C + F + L+NH I E
Sbjct: 148 YQDCELRFATKQKLQNHVNRAHEKIISYSCPHESCVGHEGFEKWSQLQNH--IRE-AHVP 204
Query: 549 ACTLCDMSFIXNGYLHAHMLXH----KKEKRFECQYWG 650
+C++C F +L H++ H ++ K + C G
Sbjct: 205 SCSICGRQFKTAAHLRHHVVLHQTTLEERKTYHCPMEG 242
Score = 46.8 bits (106), Expect = 3e-06
Identities = 24/66 (36%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = +3
Query: 459 PYECNECGKWFSSKNVLKNHKLIHEDVKRFAC--TLCDMSFIXNGYLHAHMLXHKKEKRF 632
PYE ECGK +S ++L+ H H + + F C T C +F +L H H K F
Sbjct: 26 PYE--ECGKKYSRPSLLEQHLRTHSNERPFVCDYTGCSKAFYRKSHLKIHKRCHTNVKPF 83
Query: 633 ECQYWG 650
C Y G
Sbjct: 84 SCHYDG 89
Score = 35.9 bits (79), Expect = 0.006
Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 9/93 (9%)
Frame = +3
Query: 45 NCHLCEETFSSANSKYKHVRRKHMNIKQ----NCKI--CNKAVAN---LKAHILVVHNTE 197
+C +C F +A HV +++ +C + C K+ LK HI V+H
Sbjct: 205 SCSICGRQFKTAAHLRHHVVLHQTTLEERKTYHCPMEGCKKSFTRSSALKKHISVIHEG- 263
Query: 198 SLPFECIACGRGFISKSRLDVHMAVHTKDRPHK 296
++ F C +CG F K L H+ T + HK
Sbjct: 264 NMAFHCDSCGTKFGYKHMLQRHLERGTCKKAHK 296
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 56.4 bits (130), Expect = 4e-09
Identities = 29/74 (39%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Frame = +3
Query: 372 KNHLCQFCSKTFFKKYHLQVHIRT-HTKEKPYECNECGKWFSSKNVLKNHKLIHEDVK-R 545
K+ +C CSK F + HL+ HIR+ HT EKP+ C CGK FS ++ L+ H+ +H + R
Sbjct: 421 KSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRRDNLRQHERLHVNASPR 479
Query: 546 FACTLCDMSFIXNG 587
AC + +G
Sbjct: 480 LACFFQPSGYYSSG 493
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 54.8 bits (126), Expect = 1e-08
Identities = 23/60 (38%), Positives = 39/60 (65%), Gaps = 7/60 (11%)
Frame = +3
Query: 363 KKEKNHLCQFCSKTFFKKYHLQVHIRTHTKEKPYECNE-------CGKWFSSKNVLKNHK 521
+K K ++C+ C++ F + HL+ HIR+HT EKP+ C+E CG+ FS +++L H+
Sbjct: 65 QKVKQYVCETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLPTGCGRQFSRRDLLLRHQ 124
Score = 31.9 bits (69), Expect = 0.091
Identities = 15/60 (25%), Positives = 28/60 (46%), Gaps = 7/60 (11%)
Frame = +3
Query: 207 FECIACGRGFISKSRLDVHMAVHTKDRPHKCS-------FCIKRFRTKICMQLHERQVHK 365
+ C C R F L H+ HT ++P CS C ++F + + H++++H+
Sbjct: 70 YVCETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLPTGCGRQFSRRDLLLRHQQKIHR 129
Score = 31.5 bits (68), Expect = 0.12
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = +3
Query: 492 SSKNVLKNHKLIHEDVKRFACTLCDMSFIXNGYLHAHMLXHKKEKRFEC 638
SS K+ + VK++ C C +F +L H+ H EK F C
Sbjct: 52 SSTAAKKDPNAPPQKVKQYVCETCTRAFARLEHLKRHIRSHTNEKPFTC 100
Score = 29.9 bits (64), Expect = 0.37
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +3
Query: 450 KEKPYECNECGKWFSSKNVLKNHKLIHEDVKRFACTLCD 566
K K Y C C + F+ LK H H + K F C+ D
Sbjct: 66 KVKQYVCETCTRAFARLEHLKRHIRSHTNEKPFTCSEID 104
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 53.2 bits (122), Expect = 3e-08
Identities = 20/54 (37%), Positives = 33/54 (61%)
Frame = +3
Query: 393 CSKTFFKKYHLQVHIRTHTKEKPYECNECGKWFSSKNVLKNHKLIHEDVKRFAC 554
C+K +KY+++ HI+TH ++PY C+ C F + LK H IHE+ + + C
Sbjct: 450 CNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGRPYVC 503
Score = 49.2 bits (112), Expect = 6e-07
Identities = 24/72 (33%), Positives = 36/72 (50%)
Frame = +3
Query: 306 CIKRFRTKICMQLHERQVHKKEKNHLCQFCSKTFFKKYHLQVHIRTHTKEKPYECNECGK 485
C KR K ++ H Q H ++ + C C F + + L+ H+R H +PY C EC K
Sbjct: 450 CNKRIARKYNVESHI-QTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGRPYVC-ECLK 507
Query: 486 WFSSKNVLKNHK 521
F+ + L HK
Sbjct: 508 RFNRLDALNRHK 519
Score = 46.8 bits (106), Expect = 3e-06
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Frame = +3
Query: 141 CNKAVA---NLKAHILVVHNTESLPFECIACGRGFISKSRLDVHMAVHTKDRPHKCSFCI 311
CNK +A N+++HI + P+ C C GF+ L H+ +H RP+ C C+
Sbjct: 450 CNKRIARKYNVESHIQT--HLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGRPYVCE-CL 506
Query: 312 KRFRTKICMQLHERQ 356
KRF + H+++
Sbjct: 507 KRFNRLDALNRHKQR 521
Score = 34.7 bits (76), Expect = 0.013
Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Frame = +3
Query: 462 YEC--NECGKWFSSKNVLKNHKLIHEDVKRFACTLCDMSFIXNGYLHAHMLXHKKEKRFE 635
Y C N C K + K +++H H + + C LC F+ + L H+ H+ + +
Sbjct: 443 YVCLYNGCNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGRPYV 502
Query: 636 CQ 641
C+
Sbjct: 503 CE 504
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 50.8 bits (116), Expect = 2e-07
Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Frame = +3
Query: 372 KNHLCQFCSKTFFKKYHLQVHIRTHTKEKPYECN--ECGKWFSSKNVLKNHKLIH 530
K++ C FC + F ++ H HIR+HT EKP+EC+ C K F+ ++ L H H
Sbjct: 2 KSYECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTH 56
Score = 33.5 bits (73), Expect = 0.030
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +3
Query: 285 RPHKCSFCIKRFRTKICMQLHERQVHKKEKNHLCQF--CSKTFFKKYHLQVHIRTHTKE 455
+ ++C FC + F + H R H EK C + C K F ++ L H+RTH ++
Sbjct: 2 KSYECPFCKRVFHRQEHQVRHIRS-HTGEKPFECSYPSCKKRFTRRDELIRHVRTHLRK 59
Score = 32.3 bits (70), Expect = 0.069
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +3
Query: 207 FECIACGRGFISKSRLDVHMAVHTKDRPHKCSF--CIKRFRTKICMQLHER 353
+EC C R F + H+ HT ++P +CS+ C KRF + + H R
Sbjct: 4 YECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVR 54
Score = 26.2 bits (55), Expect = 4.5
Identities = 16/58 (27%), Positives = 22/58 (37%), Gaps = 2/58 (3%)
Frame = +3
Query: 456 KPYECNECGKWFSSKNVLKNHKLIHEDVKRFACTL--CDMSFIXNGYLHAHMLXHKKE 623
K YEC C + F + H H K F C+ C F L H+ H ++
Sbjct: 2 KSYECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTHLRK 59
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 50.4 bits (115), Expect = 2e-07
Identities = 23/51 (45%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +3
Query: 384 CQFCSKTFFKKYHLQVHIRTHTKEKPYECN--ECGKWFSSKNVLKNHKLIH 530
C C+K F++ H HIRTHT EKP+ C C K FS + L H IH
Sbjct: 28 CPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIH 78
Score = 42.7 bits (96), Expect = 5e-05
Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +3
Query: 285 RPHKCSFCIKRFRTKICMQLHERQVHKKEKNHLCQF--CSKTFFKKYHLQVHIRTHT 449
RP+KC C K F ++ Q + H EK H+C F C+K F + L H R HT
Sbjct: 24 RPYKCPLCTKAF-YRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIHT 79
Score = 38.7 bits (86), Expect = 8e-04
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +3
Query: 204 PFECIACGRGFISKSRLDVHMAVHTKDRPHKCSF--CIKRFRTKICMQLHER 353
P++C C + F H+ HT ++PH C+F C KRF + H R
Sbjct: 25 PYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHAR 76
Score = 25.4 bits (53), Expect = 7.9
Identities = 16/55 (29%), Positives = 19/55 (34%), Gaps = 2/55 (3%)
Frame = +3
Query: 456 KPYECNECGKWFSSKNVLKNHKLIHEDVKRFACTL--CDMSFIXNGYLHAHMLXH 614
+PY+C C K F H H K CT C F + L H H
Sbjct: 24 RPYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIH 78
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 44.4 bits (100), Expect = 2e-05
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = +3
Query: 351 RQVHKKEKNHLCQF--CSKTFFKKYHLQVHIRTHTKEKPYECNECGKWFSSKNVLKNH 518
R + + + C F C+K+F +K H + H R+HT K + C C F+ +VL H
Sbjct: 8 RAYQEGDIRYKCDFQGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRH 65
Score = 32.3 bits (70), Expect = 0.069
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = +3
Query: 462 YECN--ECGKWFSSKNVLKNHKLIHEDVKRFACTLCDMSFIXNGYLHAHM 605
Y+C+ C K F+ K + H H + K F C C SF + L+ H+
Sbjct: 17 YKCDFQGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRHV 66
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 44.0 bits (99), Expect = 2e-05
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Frame = +3
Query: 408 FKKYHLQVHIRTHTKEKP-YECN--ECGKWFSSKNVLKNHKLIHEDVKRFACTLCDMSFI 578
F + L+ R H P + C +C K F+ K L+ H+ HE+VK F+C+ C+ +F
Sbjct: 7 FTEKPLKKRSRAHRLGDPRFYCTYPDCPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFA 66
Query: 579 XNGYLHAHM 605
+ L+ H+
Sbjct: 67 RSDVLNRHV 75
Score = 43.6 bits (98), Expect = 3e-05
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = +3
Query: 393 CSKTFFKKYHLQVHIRTHTKEKPYECNECGKWFSSKNVLKNH 518
C K+F +K HL+ H RTH K + C+ C + F+ +VL H
Sbjct: 33 CPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVLNRH 74
Score = 36.3 bits (80), Expect = 0.004
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = +3
Query: 222 CGRGFISKSRLDVHMAVHTKDRPHKCSFCIKRFRTKICMQLHERQVHKKEKN 377
C + F K L H H + CSFC + F + H +Q+H +++N
Sbjct: 33 CPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVLNRHVQQMHLQKQN 84
Score = 31.5 bits (68), Expect = 0.12
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +3
Query: 306 CIKRFRTKICMQLHERQVHKKEKNHLCQFCSKTFFKKYHLQVHIR 440
C K F K ++ HER H+ K C FC++ F + L H++
Sbjct: 33 CPKSFTRKEHLRRHER-THENVKAFSCSFCNRAFARSDVLNRHVQ 76
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 41.5 bits (93), Expect = 1e-04
Identities = 25/93 (26%), Positives = 40/93 (43%), Gaps = 2/93 (2%)
Frame = +3
Query: 81 NSKYKHVRRKHMNIKQNCKICNKAVANLKAHILVVHNTESLPFECIACGRGFISKSRLDV 260
N K HV R+H ++ +A + ++ + C C +GF S L +
Sbjct: 434 NDKRAHVSRRHST--------SRKIAQSHTGSSSTSSAANVRYRCTECLQGFSRPSSLKI 485
Query: 261 HMAVHTKDRPHKCSF--CIKRFRTKICMQLHER 353
H HT +RP C + C K F + M+ H+R
Sbjct: 486 HTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQR 518
Score = 41.5 bits (93), Expect = 1e-04
Identities = 17/51 (33%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Frame = +3
Query: 384 CQFCSKTFFKKYHLQVHIRTHTKEKPYECN--ECGKWFSSKNVLKNHKLIH 530
C C + F + L++H +HT E+P+ C+ CGK F+ ++ ++ H+ IH
Sbjct: 470 CTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQRIH 520
Score = 31.5 bits (68), Expect = 0.12
Identities = 16/53 (30%), Positives = 21/53 (39%), Gaps = 2/53 (3%)
Frame = +3
Query: 462 YECNECGKWFSSKNVLKNHKLIHEDVKRFACTL--CDMSFIXNGYLHAHMLXH 614
Y C EC + FS + LK H H + F C C +F + H H
Sbjct: 468 YRCTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQRIH 520
Score = 29.1 bits (62), Expect = 0.64
Identities = 13/36 (36%), Positives = 15/36 (41%)
Frame = +3
Query: 543 RFACTLCDMSFIXNGYLHAHMLXHKKEKRFECQYWG 650
R+ CT C F L H H E+ F C Y G
Sbjct: 467 RYRCTECLQGFSRPSSLKIHTYSHTGERPFVCDYAG 502
>SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 249
Score = 37.1 bits (82), Expect = 0.002
Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 3/43 (6%)
Frame = +3
Query: 414 KYHLQVHIRTHTKEKPYECN--ECGKWFSSKNVLKNH-KLIHE 533
++ L H+R+HT EKP+ C+ EC + F+ + L H + +HE
Sbjct: 90 RFALVAHLRSHTGEKPFICSVPECDRSFTRSDALAKHMRTVHE 132
>SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 585
Score = 35.5 bits (78), Expect = 0.007
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = +3
Query: 207 FECIACGRGFISKSRLDVHMAVHTKDRPHKCSFCIKRFRTKICMQLHERQVH 362
F C C + F L H A H+K P C +C + + K ++ H ++ H
Sbjct: 31 FPCDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRHIQRFH 82
Score = 34.3 bits (75), Expect = 0.017
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +3
Query: 384 CQFCSKTFFKKYHLQVHIRTHTKEKPYECNECGKWFSSKNVLKNH-KLIHED 536
C C+K F + +L H H+K +P C C K++LK H + H D
Sbjct: 33 CDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRHIQRFHND 84
Score = 32.7 bits (71), Expect = 0.052
Identities = 13/58 (22%), Positives = 24/58 (41%)
Frame = +3
Query: 453 EKPYECNECGKWFSSKNVLKNHKLIHEDVKRFACTLCDMSFIXNGYLHAHMLXHKKEK 626
++ + C++C K F+ L HK H + C C++ L H+ +K
Sbjct: 28 KRVFPCDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRHIQRFHNDK 85
Score = 26.2 bits (55), Expect = 4.5
Identities = 18/52 (34%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
Frame = +3
Query: 492 SSKNVLKNHKLIHEDVKR-FACTLCDMSFIXNGYLHAHMLXHKKEKRFECQY 644
S+K L LI D KR F C C F + L H H K + C Y
Sbjct: 14 SAKRKLTEPSLI--DSKRVFPCDQCAKRFTRHENLTRHKACHSKAEPIPCPY 63
>SPBP19A11.06 |lid2|SPBP4H10.01|Lid2 complex subunit Lid2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1513
Score = 31.9 bits (69), Expect = 0.091
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +3
Query: 465 ECNECGKWFSSKNVLKNHKLIHEDVKRFACTLCD 566
EC C +W+ +K + + K + +D ++F C +CD
Sbjct: 1111 ECEICHEWYHAKCLKMSKKKLRQD-EKFTCPICD 1143
>SPAC343.11c |msc1||multi-copy suppressor of Chk1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1588
Score = 30.3 bits (65), Expect = 0.28
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +3
Query: 465 ECNECGKWFSSKNVLKNHKLIHEDVKRFACTLCD 566
EC C +W+ +K + + K + D ++F C +CD
Sbjct: 1186 ECELCHEWYHAKCMKMSKKKLRAD-EKFICPICD 1218
>SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 442
Score = 28.7 bits (61), Expect = 0.85
Identities = 21/82 (25%), Positives = 33/82 (40%), Gaps = 2/82 (2%)
Frame = +3
Query: 282 DRPHKCSF--CIKRFRTKICMQLHERQVHKKEKNHLCQFCSKTFFKKYHLQVHIRTHTKE 455
D+P+KC C K ++ + ++ H+ H CS H +
Sbjct: 347 DKPYKCPVPNCDKAYKNQNGLKYHKLHGH----------CSPITTPTPAPIPHQGFVVEN 396
Query: 456 KPYECNECGKWFSSKNVLKNHK 521
KPY C C K + + N LK H+
Sbjct: 397 KPYRCEVCSKRYKNLNGLKYHR 418
Score = 27.5 bits (58), Expect = 2.0
Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
Frame = +3
Query: 453 EKPYECN--ECGKWFSSKNVLKNHKL 524
+KPY+C C K + ++N LK HKL
Sbjct: 347 DKPYKCPVPNCDKAYKNQNGLKYHKL 372
Score = 26.6 bits (56), Expect = 3.4
Identities = 8/34 (23%), Positives = 17/34 (50%)
Frame = +3
Query: 261 HMAVHTKDRPHKCSFCIKRFRTKICMQLHERQVH 362
H +++P++C C KR++ ++ H H
Sbjct: 389 HQGFVVENKPYRCEVCSKRYKNLNGLKYHRTHSH 422
>SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 732
Score = 27.5 bits (58), Expect = 2.0
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +3
Query: 48 CHLCEETFSSANSKYKHVRRKHMNIKQNCKICNKAVANLKAH 173
C C F + +KH R KH + C IC++ VA H
Sbjct: 247 CEFCNTHFYDDDELFKHCREKH----ERCYICDQ-VAGRPTH 283
>SPAC732.02c |||fructose-2,6-bisphosphate 2-phosphatase activity
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 408
Score = 27.1 bits (57), Expect = 2.6
Identities = 12/56 (21%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = -1
Query: 220 AIHSNGSDSVLCTTNMCAFRFATALLQILQ---FCLMFICLRLTCLYFELADENVS 62
++ G+D + N C +F +++++ + LMF+ + C ++ DEN++
Sbjct: 76 SVFKKGTDVAILDFNQCTLKFRKSIVELAKARNMLLMFV--EVVCTNQKIIDENIT 129
>SPAC458.07 |tfa1|SPAPYUG7.01|transcription factor TFIIE alpha
subunit Tfa1 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 448
Score = 26.6 bits (56), Expect = 3.4
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +3
Query: 372 KNHLCQFCSKTFFKKYHLQVHIRTHTKEKPYECNECG 482
K ++C FC+K F L V + T E + CN CG
Sbjct: 134 KGYVCPFCNKKFSS---LDV-LSLVTNEGTFACNVCG 166
Score = 25.4 bits (53), Expect = 7.9
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +3
Query: 435 IRTHTKEKPYECNECGKWFSSKNVLKNHKLIHEDVKRFACTLC 563
+R K Y C C K FSS +VL L+ + FAC +C
Sbjct: 127 MRNDFDSKGYVCPFCNKKFSSLDVL---SLVTNE-GTFACNVC 165
>SPBC609.01 |||ribonuclease II |Schizosaccharomyces pombe|chr
2|||Manual
Length = 1157
Score = 26.2 bits (55), Expect = 4.5
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +3
Query: 273 HTKDRPHKCSFCIKRFRTKICMQLHERQVHKKEK 374
HT D P S C+KR T I + +++ + ++K
Sbjct: 578 HTYDFPESLSHCVKRLPTPIPAEELQKRYNLRDK 611
>SPCC553.07c |mug40||DinB translesion DNA repair
polymerase|Schizosaccharomyces pombe|chr 3|||Manual
Length = 547
Score = 26.2 bits (55), Expect = 4.5
Identities = 19/74 (25%), Positives = 30/74 (40%)
Frame = -1
Query: 235 NPRPHAIHSNGSDSVLCTTNMCAFRFATALLQILQFCLMFICLRLTCLYFELADENVSSQ 56
NP+ ++ SVLCT N A +F + +F IC L + L++ + S+
Sbjct: 149 NPKLKSLPMAVGKSVLCTANYVARKFGVR-SAMPEFIARKICPDLVVIPLNLSEYAIKSK 207
Query: 55 R*QLTLGLSSGGRC 14
Q L C
Sbjct: 208 EIQNVLAQYDSNLC 221
>SPCC584.12 |mug42||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 115
Score = 25.8 bits (54), Expect = 6.0
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +3
Query: 342 LHERQVHKKEKNHLCQFCSKTFFK 413
LHE + H K+KN C K FFK
Sbjct: 16 LHETENHVKKKNWRCGKGIKCFFK 39
>SPAC17G8.13c |mst2||histone acetyltransferase
Mst2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 407
Score = 25.8 bits (54), Expect = 6.0
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +3
Query: 462 YECNECGKWFSSKNVLKNHKL 524
Y C C K+ +S +VL+ HK+
Sbjct: 132 YICESCLKYMNSDHVLQRHKM 152
>SPAC19G12.14 |its3||1-phosphatidylinositol-4-phosphate 5-kinase
Its3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 742
Score = 25.8 bits (54), Expect = 6.0
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -1
Query: 250 RDFDMNPRPHAIHSNGSDSVLCTTNM 173
+DF NP H+ S+ +DSV+ T +
Sbjct: 87 QDFPSNPTAHSPSSSSNDSVITATGV 112
>SPAC6B12.08 |mug185||DNAJ domain protein Jjj
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 380
Score = 25.4 bits (53), Expect = 7.9
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3
Query: 459 PYECNECGKWFSSKNVLKNHK 521
P C C K F S+N L+NH+
Sbjct: 269 PIMCMVCNKNFRSQNQLENHE 289
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,706,932
Number of Sequences: 5004
Number of extensions: 54280
Number of successful extensions: 267
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 203
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 252
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 323158234
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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