Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0891
         (550 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   2.3  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    22   3.1  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    22   3.1  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    22   3.1  
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    22   3.1  
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    22   3.1  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    22   4.1  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    22   4.1  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   5.4  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = +1

Query: 277 YRLSKLESLCTLLT 318
           +RLSK ++ CTL+T
Sbjct: 398 FRLSKTKTFCTLVT 411


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -3

Query: 242 WYQNLHLEQGYRLKEHFV 189
           W+QN  ++Q  R+KE  +
Sbjct: 300 WFQNRRMKQKKRMKEGLI 317


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = -3

Query: 107 IQQIWLQ*TSFFYLNSNYHFVVPVFSLQ 24
           IQQI L  ++     S Y FVV V  LQ
Sbjct: 173 IQQIMLFVSALIKAFSKYQFVVLVLQLQ 200


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = -3

Query: 107 IQQIWLQ*TSFFYLNSNYHFVVPVFSLQ 24
           IQQI L  ++     S Y FVV V  LQ
Sbjct: 173 IQQIMLFVSALIKAFSKYQFVVLVLQLQ 200


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -3

Query: 242 WYQNLHLEQGYRLKEHFV 189
           W+QN  ++Q  R+KE  +
Sbjct: 89  WFQNRRMKQKKRMKEGLI 106


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -3

Query: 242 WYQNLHLEQGYRLKEHFV 189
           W+QN  ++Q  R+KE  +
Sbjct: 89  WFQNRRMKQKKRMKEGLI 106


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory
          receptor candidate 45 protein.
          Length = 379

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -3

Query: 80 SFFYLNSNYHFVVPVFSLQK 21
          SFFY   N   +VP +S +K
Sbjct: 15 SFFYKICNIFGIVPPYSFEK 34


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory
          receptor candidate 8 protein.
          Length = 379

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -3

Query: 80 SFFYLNSNYHFVVPVFSLQK 21
          SFFY   N   +VP +S +K
Sbjct: 15 SFFYKICNIFGIVPPYSFEK 34


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +1

Query: 271 SLYRLSKLESLCTLL 315
           S +RLSK +S CT +
Sbjct: 33  SYFRLSKAKSFCTFV 47


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,142
Number of Sequences: 336
Number of extensions: 2263
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13516233
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)