Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0887
(700 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U02964-1|AAA03444.1| 376|Anopheles gambiae actin 1D protein. 288 1e-79
U02933-1|AAA56882.1| 376|Anopheles gambiae actin 1D protein. 288 1e-79
U02930-1|AAA56881.1| 376|Anopheles gambiae actin 1D protein. 288 1e-79
CR954256-1|CAJ14142.1| 376|Anopheles gambiae actin protein. 272 7e-75
AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha ... 24 5.3
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc... 23 7.0
AY330181-1|AAQ16287.1| 156|Anopheles gambiae odorant-binding pr... 23 7.0
EF519478-1|ABP73565.1| 165|Anopheles gambiae CTLMA2 protein. 23 9.2
AY062204-1|AAL58565.1| 150|Anopheles gambiae cytochrome P450 CY... 23 9.2
AY062200-1|AAL58561.1| 151|Anopheles gambiae cytochrome P450 CY... 23 9.2
AJ459779-1|CAD30839.1| 405|Anopheles gambiae clip-domain serine... 23 9.2
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein. 23 9.2
>U02964-1|AAA03444.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 288 bits (706), Expect = 1e-79
Identities = 131/131 (100%), Positives = 131/131 (100%)
Frame = +1
Query: 100 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 279
MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 280 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 459
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 460 TQIMFETFNTP 492
TQIMFETFNTP
Sbjct: 121 TQIMFETFNTP 131
Score = 100 bits (239), Expect = 5e-23
Identities = 48/51 (94%), Positives = 48/51 (94%)
Frame = +2
Query: 491 PAMYVGIQAVLSLYASGRTTGIVLDSRDGVSHTVPIYEGYALPHAILXLDL 643
PAMYV IQAVLSLYASGRTTGIVLDS DGVSHTVPIYEGYALPHAIL LDL
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 181
Score = 24.2 bits (50), Expect = 4.0
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +3
Query: 648 GGDLPXYLMXILXERG 695
G DL YLM IL ERG
Sbjct: 183 GRDLTDYLMKILTERG 198
>U02933-1|AAA56882.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 288 bits (706), Expect = 1e-79
Identities = 131/131 (100%), Positives = 131/131 (100%)
Frame = +1
Query: 100 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 279
MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 280 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 459
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 460 TQIMFETFNTP 492
TQIMFETFNTP
Sbjct: 121 TQIMFETFNTP 131
Score = 100 bits (239), Expect = 5e-23
Identities = 48/51 (94%), Positives = 48/51 (94%)
Frame = +2
Query: 491 PAMYVGIQAVLSLYASGRTTGIVLDSRDGVSHTVPIYEGYALPHAILXLDL 643
PAMYV IQAVLSLYASGRTTGIVLDS DGVSHTVPIYEGYALPHAIL LDL
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 181
Score = 24.2 bits (50), Expect = 4.0
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +3
Query: 648 GGDLPXYLMXILXERG 695
G DL YLM IL ERG
Sbjct: 183 GRDLTDYLMKILTERG 198
>U02930-1|AAA56881.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 288 bits (706), Expect = 1e-79
Identities = 131/131 (100%), Positives = 131/131 (100%)
Frame = +1
Query: 100 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 279
MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 280 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 459
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 460 TQIMFETFNTP 492
TQIMFETFNTP
Sbjct: 121 TQIMFETFNTP 131
Score = 100 bits (239), Expect = 5e-23
Identities = 48/51 (94%), Positives = 48/51 (94%)
Frame = +2
Query: 491 PAMYVGIQAVLSLYASGRTTGIVLDSRDGVSHTVPIYEGYALPHAILXLDL 643
PAMYV IQAVLSLYASGRTTGIVLDS DGVSHTVPIYEGYALPHAIL LDL
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 181
Score = 24.2 bits (50), Expect = 4.0
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +3
Query: 648 GGDLPXYLMXILXERG 695
G DL YLM IL ERG
Sbjct: 183 GRDLTDYLMKILTERG 198
>CR954256-1|CAJ14142.1| 376|Anopheles gambiae actin protein.
Length = 376
Score = 272 bits (667), Expect = 7e-75
Identities = 121/131 (92%), Positives = 126/131 (96%)
Frame = +1
Query: 100 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 279
MCD++ ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG KD+YVGDEAQ
Sbjct: 1 MCDDDAGALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGNKDAYVGDEAQ 60
Query: 280 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 459
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK+NREKM
Sbjct: 61 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKSNREKM 120
Query: 460 TQIMFETFNTP 492
TQIMFETF P
Sbjct: 121 TQIMFETFAAP 131
Score = 97.5 bits (232), Expect = 4e-22
Identities = 45/51 (88%), Positives = 48/51 (94%)
Frame = +2
Query: 491 PAMYVGIQAVLSLYASGRTTGIVLDSRDGVSHTVPIYEGYALPHAILXLDL 643
PA+YV IQAVLSLYASGRTTG+VLDS DGVSHTVPIYEGYALPHAIL +DL
Sbjct: 131 PAVYVAIQAVLSLYASGRTTGVVLDSGDGVSHTVPIYEGYALPHAILRMDL 181
Score = 24.2 bits (50), Expect = 4.0
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +3
Query: 648 GGDLPXYLMXILXERG 695
G DL YLM IL ERG
Sbjct: 183 GRDLTDYLMKILTERG 198
>AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha 1
chain precursor protein.
Length = 801
Score = 23.8 bits (49), Expect = 5.3
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +3
Query: 207 GKAPPSGRDGRYGTEGL 257
G+ P GRDG +G GL
Sbjct: 344 GQPGPRGRDGNFGPVGL 360
>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
channel alpha2-delta subunit 1 protein.
Length = 1256
Score = 23.4 bits (48), Expect = 7.0
Identities = 12/35 (34%), Positives = 15/35 (42%)
Frame = +3
Query: 402 TPSPAH*GSPQPQGQQREDDPDHVRNIQHAPPCTL 506
TP +P PQ + P V + HA PC L
Sbjct: 1087 TPDYDQRSTPTPQRSHTQAGPRVVPDPAHARPCDL 1121
>AY330181-1|AAQ16287.1| 156|Anopheles gambiae odorant-binding
protein AgamOBP55 protein.
Length = 156
Score = 23.4 bits (48), Expect = 7.0
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +1
Query: 94 FKMCDEEVAALVVDNGSGMC 153
+++C E+ A +DNG+ MC
Sbjct: 42 YRVCHEQHATPQMDNGTVMC 61
>EF519478-1|ABP73565.1| 165|Anopheles gambiae CTLMA2 protein.
Length = 165
Score = 23.0 bits (47), Expect = 9.2
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -2
Query: 213 PSHDRGEHGARSIISC 166
P+H RGEHG + C
Sbjct: 121 PNHARGEHGQQPAERC 136
>AY062204-1|AAL58565.1| 150|Anopheles gambiae cytochrome P450
CYP4C28 protein.
Length = 150
Score = 23.0 bits (47), Expect = 9.2
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +3
Query: 282 QKRYPDPQIPHRTRNRH 332
+K YPD +P + NRH
Sbjct: 117 EKFYPDRFLPENSTNRH 133
>AY062200-1|AAL58561.1| 151|Anopheles gambiae cytochrome P450
CYP4G17 protein.
Length = 151
Score = 23.0 bits (47), Expect = 9.2
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +3
Query: 294 PDPQIPHRTRNRH 332
PD +P RT+NRH
Sbjct: 122 PDNFLPERTQNRH 134
>AJ459779-1|CAD30839.1| 405|Anopheles gambiae clip-domain serine
protease protein.
Length = 405
Score = 23.0 bits (47), Expect = 9.2
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = -3
Query: 482 NVSNMIWVIFSLLALGLRGASV 417
++ IW I +++LG+RG V
Sbjct: 361 DMKRAIWYITGIVSLGVRGCGV 382
>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
Length = 1356
Score = 23.0 bits (47), Expect = 9.2
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +3
Query: 432 QPQGQQREDDPDHVRNIQHAPPCTLA 509
Q Q QQ++ + QH PP T A
Sbjct: 1308 QQQQQQQQQQQQQQQQQQHQPPSTQA 1333
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 783,533
Number of Sequences: 2352
Number of extensions: 17708
Number of successful extensions: 65
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 65
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -