BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brP-0886 (550 letters) Database: mosquito 2352 sequences; 563,979 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein. 26 0.94 AY146749-1|AAO12064.1| 336|Anopheles gambiae odorant-binding pr... 24 2.9 AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha ... 24 2.9 AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 24 2.9 AJ439060-18|CAD27769.1| 257|Anopheles gambiae hypothetical prot... 24 3.8 AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p... 23 5.0 AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubu... 23 5.0 >CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein. Length = 1664 Score = 25.8 bits (54), Expect = 0.94 Identities = 9/18 (50%), Positives = 12/18 (66%) Frame = -1 Query: 211 PGGAATQSSRPAPIQRHF 158 P G A+ S PAP++R F Sbjct: 1569 PNGVASSSQSPAPVRREF 1586 >AY146749-1|AAO12064.1| 336|Anopheles gambiae odorant-binding protein AgamOBP38 protein. Length = 336 Score = 24.2 bits (50), Expect = 2.9 Identities = 12/29 (41%), Positives = 13/29 (44%), Gaps = 1/29 (3%) Frame = +3 Query: 111 LLRYDESR-PLRSGENSKWRCIGAGRLLW 194 L YD + PL G N RCIG W Sbjct: 53 LYAYDSAAVPLNCGSNCLLRCIGLNARWW 81 >AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha 1 chain precursor protein. Length = 801 Score = 24.2 bits (50), Expect = 2.9 Identities = 14/44 (31%), Positives = 18/44 (40%) Frame = -2 Query: 246 GKGLCSGLDTGPQEVRLPRAVGPHRYSAILSSHQTSAGATRHIE 115 G+ C+G D P LP GP Y+ I + RH E Sbjct: 178 GRDGCNGTDGLPGLSGLPGNPGPRGYAGIPGTKGEKGEPARHPE 221 >AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative differentiation regulator protein. Length = 1283 Score = 24.2 bits (50), Expect = 2.9 Identities = 9/20 (45%), Positives = 10/20 (50%) Frame = +2 Query: 182 PTALGSRTSWGPVSSPEHKP 241 P LG R GP+ P H P Sbjct: 563 PLGLGMRPQGGPLGLPSHHP 582 >AJ439060-18|CAD27769.1| 257|Anopheles gambiae hypothetical protein protein. Length = 257 Score = 23.8 bits (49), Expect = 3.8 Identities = 11/27 (40%), Positives = 15/27 (55%) Frame = +3 Query: 213 ARCRVLNTNPSRALSVGTLTEYSTLSK 293 ARC V N +PS T +++ TL K Sbjct: 107 ARCSVGNNSPSEETIGRTFSKFMTLGK 133 >AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein protein. Length = 3325 Score = 23.4 bits (48), Expect = 5.0 Identities = 9/28 (32%), Positives = 12/28 (42%) Frame = -3 Query: 254 EGAGRVCVQDSTPGPRRCGYPEQSARTD 171 E +G C+ D T P C Y + D Sbjct: 592 ETSGYTCISDETEAPGSCFYITKEGTID 619 >AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubule binding protein protein. Length = 838 Score = 23.4 bits (48), Expect = 5.0 Identities = 10/19 (52%), Positives = 12/19 (63%) Frame = -2 Query: 228 GLDTGPQEVRLPRAVGPHR 172 G+ GPQ +R P VGP R Sbjct: 184 GMPPGPQMMRPPGNVGPPR 202 Database: mosquito Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 563,979 Number of sequences in database: 2352 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 530,767 Number of Sequences: 2352 Number of extensions: 10032 Number of successful extensions: 64 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 64 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 64 length of database: 563,979 effective HSP length: 61 effective length of database: 420,507 effective search space used: 50881347 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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