Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0886
         (550 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           26   0.94 
AY146749-1|AAO12064.1|  336|Anopheles gambiae odorant-binding pr...    24   2.9  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    24   2.9  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    24   2.9  
AJ439060-18|CAD27769.1|  257|Anopheles gambiae hypothetical prot...    24   3.8  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    23   5.0  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    23   5.0  

>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 25.8 bits (54), Expect = 0.94
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -1

Query: 211  PGGAATQSSRPAPIQRHF 158
            P G A+ S  PAP++R F
Sbjct: 1569 PNGVASSSQSPAPVRREF 1586


>AY146749-1|AAO12064.1|  336|Anopheles gambiae odorant-binding
           protein AgamOBP38 protein.
          Length = 336

 Score = 24.2 bits (50), Expect = 2.9
 Identities = 12/29 (41%), Positives = 13/29 (44%), Gaps = 1/29 (3%)
 Frame = +3

Query: 111 LLRYDESR-PLRSGENSKWRCIGAGRLLW 194
           L  YD +  PL  G N   RCIG     W
Sbjct: 53  LYAYDSAAVPLNCGSNCLLRCIGLNARWW 81


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 24.2 bits (50), Expect = 2.9
 Identities = 14/44 (31%), Positives = 18/44 (40%)
 Frame = -2

Query: 246 GKGLCSGLDTGPQEVRLPRAVGPHRYSAILSSHQTSAGATRHIE 115
           G+  C+G D  P    LP   GP  Y+ I  +        RH E
Sbjct: 178 GRDGCNGTDGLPGLSGLPGNPGPRGYAGIPGTKGEKGEPARHPE 221


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 24.2 bits (50), Expect = 2.9
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = +2

Query: 182 PTALGSRTSWGPVSSPEHKP 241
           P  LG R   GP+  P H P
Sbjct: 563 PLGLGMRPQGGPLGLPSHHP 582


>AJ439060-18|CAD27769.1|  257|Anopheles gambiae hypothetical protein
           protein.
          Length = 257

 Score = 23.8 bits (49), Expect = 3.8
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +3

Query: 213 ARCRVLNTNPSRALSVGTLTEYSTLSK 293
           ARC V N +PS      T +++ TL K
Sbjct: 107 ARCSVGNNSPSEETIGRTFSKFMTLGK 133


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
           protein.
          Length = 3325

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 9/28 (32%), Positives = 12/28 (42%)
 Frame = -3

Query: 254 EGAGRVCVQDSTPGPRRCGYPEQSARTD 171
           E +G  C+ D T  P  C Y  +    D
Sbjct: 592 ETSGYTCISDETEAPGSCFYITKEGTID 619


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -2

Query: 228 GLDTGPQEVRLPRAVGPHR 172
           G+  GPQ +R P  VGP R
Sbjct: 184 GMPPGPQMMRPPGNVGPPR 202


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 530,767
Number of Sequences: 2352
Number of extensions: 10032
Number of successful extensions: 64
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 64
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50881347
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)