Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0885
(750 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY071521-1|AAL49143.1| 301|Drosophila melanogaster RE57120p pro... 268 4e-72
AE013599-68|AAF57336.1| 301|Drosophila melanogaster CG10465-PA ... 268 4e-72
AY069350-1|AAL39495.1| 361|Drosophila melanogaster LD05823p pro... 68 1e-11
AE014297-80|AAF52131.3| 364|Drosophila melanogaster CG14647-PA ... 68 1e-11
AY060259-1|AAL25298.1| 228|Drosophila melanogaster GH08630p pro... 66 4e-11
AE014297-2887|AAF55820.1| 228|Drosophila melanogaster CG10830-P... 66 4e-11
AL031024-3|CAA19832.1| 308|Drosophila melanogaster EG:196F3.2 p... 62 8e-10
AE014298-230|AAF45642.1| 211|Drosophila melanogaster CG32810-PB... 62 8e-10
AY069257-1|AAL39402.1| 173|Drosophila melanogaster GM03763p pro... 61 2e-09
AY118359-1|AAM48388.1| 338|Drosophila melanogaster RE04768p pro... 59 6e-09
AE013599-3227|AAF46733.1| 338|Drosophila melanogaster CG10440-P... 59 6e-09
BT016086-1|AAV36971.1| 730|Drosophila melanogaster LD44003p pro... 56 5e-08
AE014297-1048|AAF54457.1| 730|Drosophila melanogaster CG9467-PA... 56 5e-08
BT024961-1|ABE01191.1| 1186|Drosophila melanogaster IP15272p pro... 30 3.9
BT023946-1|ABB36450.1| 2106|Drosophila melanogaster LD32003p pro... 30 3.9
BT023795-1|AAZ41804.1| 2154|Drosophila melanogaster GH08786p pro... 30 3.9
AE014297-689|AAF54180.1| 2117|Drosophila melanogaster CG2747-PB,... 30 3.9
AE014297-688|AAG22133.2| 2165|Drosophila melanogaster CG2747-PA,... 30 3.9
AY058252-1|AAL13481.1| 561|Drosophila melanogaster GH01404p pro... 29 8.9
AF134239-1|AAD43051.1| 1057|Drosophila melanogaster Recq helicas... 29 8.9
AE014296-2400|AAN11801.1| 1058|Drosophila melanogaster CG4879-PB... 29 8.9
AB031087-1|BAA88313.1| 1058|Drosophila melanogaster DNA helicase... 29 8.9
AB031086-1|BAA88312.1| 1058|Drosophila melanogaster DNA helicase... 29 8.9
>AY071521-1|AAL49143.1| 301|Drosophila melanogaster RE57120p
protein.
Length = 301
Score = 268 bits (658), Expect = 4e-72
Identities = 133/178 (74%), Positives = 147/178 (82%), Gaps = 1/178 (0%)
Frame = +1
Query: 220 EIMSGDHKTLLKGSPSQYVKLNVGGTLFYTTIGTLTKS-DNMLRTMFSGRMEVLTDSEGW 396
E MSGDHK LLKG SQY+KLNVGG L+YTTIGTLTK+ D ML MFSGRMEVLTDSEGW
Sbjct: 3 ESMSGDHKILLKGHSSQYLKLNVGGHLYYTTIGTLTKNNDTMLSAMFSGRMEVLTDSEGW 62
Query: 397 ILIDRCGKHFGTILNYLRDGTVALPDSYKEIMELLAEAKYFLIEELTESCLQALAKKERE 576
ILIDRCG HFG ILNYLRDGTV LP++ KEI ELLAEAKY+ I EL SC +AL +E
Sbjct: 63 ILIDRCGNHFGIILNYLRDGTVPLPETNKEIAELLAEAKYYCITELAISCERAL-YAHQE 121
Query: 577 AEPICRVPLITSQKEEQLLIMSTSKPVVKLLINRHNNKYSYTSTSDDNLLKNIELFDK 750
+PICR+PLITSQKEEQLL+ + KP V L++ R NNKYSYTSTSDDNLLKNIELFDK
Sbjct: 122 PKPICRIPLITSQKEEQLLLSVSLKPAVILVVQRQNNKYSYTSTSDDNLLKNIELFDK 179
>AE013599-68|AAF57336.1| 301|Drosophila melanogaster CG10465-PA
protein.
Length = 301
Score = 268 bits (658), Expect = 4e-72
Identities = 133/178 (74%), Positives = 147/178 (82%), Gaps = 1/178 (0%)
Frame = +1
Query: 220 EIMSGDHKTLLKGSPSQYVKLNVGGTLFYTTIGTLTKS-DNMLRTMFSGRMEVLTDSEGW 396
E MSGDHK LLKG SQY+KLNVGG L+YTTIGTLTK+ D ML MFSGRMEVLTDSEGW
Sbjct: 3 ESMSGDHKILLKGHSSQYLKLNVGGHLYYTTIGTLTKNNDTMLSAMFSGRMEVLTDSEGW 62
Query: 397 ILIDRCGKHFGTILNYLRDGTVALPDSYKEIMELLAEAKYFLIEELTESCLQALAKKERE 576
ILIDRCG HFG ILNYLRDGTV LP++ KEI ELLAEAKY+ I EL SC +AL +E
Sbjct: 63 ILIDRCGNHFGIILNYLRDGTVPLPETNKEIAELLAEAKYYCITELAISCERAL-YAHQE 121
Query: 577 AEPICRVPLITSQKEEQLLIMSTSKPVVKLLINRHNNKYSYTSTSDDNLLKNIELFDK 750
+PICR+PLITSQKEEQLL+ + KP V L++ R NNKYSYTSTSDDNLLKNIELFDK
Sbjct: 122 PKPICRIPLITSQKEEQLLLSVSLKPAVILVVQRQNNKYSYTSTSDDNLLKNIELFDK 179
>AY069350-1|AAL39495.1| 361|Drosophila melanogaster LD05823p
protein.
Length = 361
Score = 68.1 bits (159), Expect = 1e-11
Identities = 45/119 (37%), Positives = 68/119 (57%), Gaps = 5/119 (4%)
Frame = +1
Query: 229 SGDHKTLLKGSPSQYVKLNVGGTLFYTTIGTLT--KSDNMLRTMF--SGRMEVL-TDSEG 393
+GD +P+++VKLNVGG ++ TTI TL + D+ML MF +G M+ D +G
Sbjct: 47 AGDFVAASGFAPNRWVKLNVGGQIYATTIDTLVGREPDSMLARMFLQNGSMKPSERDEQG 106
Query: 394 WILIDRCGKHFGTILNYLRDGTVALPDSYKEIMELLAEAKYFLIEELTESCLQALAKKE 570
LIDR ++F I+NYLR G DS ++ +L EA++F I L + L ++E
Sbjct: 107 AYLIDRSPRYFEPIINYLRHGQFVC-DSNISVLGVLEEARFFGIFSLVTHLEERLGQQE 164
>AE014297-80|AAF52131.3| 364|Drosophila melanogaster CG14647-PA
protein.
Length = 364
Score = 68.1 bits (159), Expect = 1e-11
Identities = 45/119 (37%), Positives = 68/119 (57%), Gaps = 5/119 (4%)
Frame = +1
Query: 229 SGDHKTLLKGSPSQYVKLNVGGTLFYTTIGTLT--KSDNMLRTMF--SGRMEVL-TDSEG 393
+GD +P+++VKLNVGG ++ TTI TL + D+ML MF +G M+ D +G
Sbjct: 50 AGDFVAASGFAPNRWVKLNVGGQIYATTIDTLVGREPDSMLARMFLQNGSMKPSERDEQG 109
Query: 394 WILIDRCGKHFGTILNYLRDGTVALPDSYKEIMELLAEAKYFLIEELTESCLQALAKKE 570
LIDR ++F I+NYLR G DS ++ +L EA++F I L + L ++E
Sbjct: 110 AYLIDRSPRYFEPIINYLRHGQFVC-DSNISVLGVLEEARFFGIFSLVTHLEERLGQQE 167
>AY060259-1|AAL25298.1| 228|Drosophila melanogaster GH08630p
protein.
Length = 228
Score = 66.5 bits (155), Expect = 4e-11
Identities = 39/108 (36%), Positives = 64/108 (59%), Gaps = 2/108 (1%)
Frame = +1
Query: 268 QYVKLNVGGTLFYTTIGTLTKSDN-MLRTMFS-GRMEVLTDSEGWILIDRCGKHFGTILN 441
+ ++LNVGG + TT+ TL + + +L +F GR + DS+G +DR G F IL+
Sbjct: 3 EIIELNVGGVSYTTTLATLLQDKSTLLAELFGEGRDSLAKDSKGRYFLDRDGVLFRYILD 62
Query: 442 YLRDGTVALPDSYKEIMELLAEAKYFLIEELTESCLQALAKKEREAEP 585
+LRD + LP+ ++E LL EA++F + + E C+ + ER+A P
Sbjct: 63 FLRDKALHLPEGFRERQRLLREAEHFKLTAMLE-CI----RSERDARP 105
>AE014297-2887|AAF55820.1| 228|Drosophila melanogaster CG10830-PA
protein.
Length = 228
Score = 66.5 bits (155), Expect = 4e-11
Identities = 39/108 (36%), Positives = 64/108 (59%), Gaps = 2/108 (1%)
Frame = +1
Query: 268 QYVKLNVGGTLFYTTIGTLTKSDN-MLRTMFS-GRMEVLTDSEGWILIDRCGKHFGTILN 441
+ ++LNVGG + TT+ TL + + +L +F GR + DS+G +DR G F IL+
Sbjct: 3 EIIELNVGGVSYTTTLATLLQDKSTLLAELFGEGRDSLAKDSKGRYFLDRDGVLFRYILD 62
Query: 442 YLRDGTVALPDSYKEIMELLAEAKYFLIEELTESCLQALAKKEREAEP 585
+LRD + LP+ ++E LL EA++F + + E C+ + ER+A P
Sbjct: 63 FLRDKALHLPEGFRERQRLLREAEHFKLTAMLE-CI----RSERDARP 105
>AL031024-3|CAA19832.1| 308|Drosophila melanogaster EG:196F3.2
protein.
Length = 308
Score = 62.1 bits (144), Expect = 8e-10
Identities = 45/135 (33%), Positives = 71/135 (52%), Gaps = 4/135 (2%)
Frame = +1
Query: 247 LLKGSPSQYVKLNVGGTLFYTTIGTLTKSDN-MLRTMFSGRMEVLTDSE--GWILIDRCG 417
L K Q+VKLNVGGT F TT TL++ N L + ++++D + G LIDR
Sbjct: 15 LKKQGTDQWVKLNVGGTYFLTTKTTLSRDPNSFLSRLIQEDCDLISDRDETGAYLIDRDP 74
Query: 418 KHFGTILNYLRDGTVALPDSYKEIMELLAEAKYFLIEELTESCLQA-LAKKEREAEPICR 594
K+F +LNYLR G + L +E +L EA+++ + +L + L + +R R
Sbjct: 75 KYFAPVLNYLRHGKLVLDGVSEE--GVLEEAEFYNVTQLIALLKECILHRDQRPQTDKKR 132
Query: 595 VPLITSQKEEQLLIM 639
V + +E++L M
Sbjct: 133 VYRVLQCREQELTQM 147
>AE014298-230|AAF45642.1| 211|Drosophila melanogaster CG32810-PB
protein.
Length = 211
Score = 62.1 bits (144), Expect = 8e-10
Identities = 45/135 (33%), Positives = 71/135 (52%), Gaps = 4/135 (2%)
Frame = +1
Query: 247 LLKGSPSQYVKLNVGGTLFYTTIGTLTKSDN-MLRTMFSGRMEVLTDSE--GWILIDRCG 417
L K Q+VKLNVGGT F TT TL++ N L + ++++D + G LIDR
Sbjct: 15 LKKQGTDQWVKLNVGGTYFLTTKTTLSRDPNSFLSRLIQEDCDLISDRDETGAYLIDRDP 74
Query: 418 KHFGTILNYLRDGTVALPDSYKEIMELLAEAKYFLIEELTESCLQA-LAKKEREAEPICR 594
K+F +LNYLR G + L +E +L EA+++ + +L + L + +R R
Sbjct: 75 KYFAPVLNYLRHGKLVLDGVSEE--GVLEEAEFYNVTQLIALLKECILHRDQRPQTDKKR 132
Query: 595 VPLITSQKEEQLLIM 639
V + +E++L M
Sbjct: 133 VYRVLQCREQELTQM 147
>AY069257-1|AAL39402.1| 173|Drosophila melanogaster GM03763p
protein.
Length = 173
Score = 60.9 bits (141), Expect = 2e-09
Identities = 38/99 (38%), Positives = 57/99 (57%), Gaps = 3/99 (3%)
Frame = +1
Query: 247 LLKGSPSQYVKLNVGGTLFYTTIGTLTKSDN-MLRTMFSGRMEVLTDSE--GWILIDRCG 417
L K Q+VKLNVGGT F TT TL++ N L + ++++D + G LIDR
Sbjct: 15 LKKQGTDQWVKLNVGGTYFLTTKTTLSRDPNSFLSRLIQEDCDLISDRDETGAYLIDRDP 74
Query: 418 KHFGTILNYLRDGTVALPDSYKEIMELLAEAKYFLIEEL 534
K+F +LNYLR G + L +E +L EA+++ + +L
Sbjct: 75 KYFAPVLNYLRHGKLVLDGVSEE--GVLEEAEFYNVTQL 111
>AY118359-1|AAM48388.1| 338|Drosophila melanogaster RE04768p
protein.
Length = 338
Score = 59.3 bits (137), Expect = 6e-09
Identities = 31/99 (31%), Positives = 64/99 (64%), Gaps = 2/99 (2%)
Frame = +1
Query: 274 VKLNVGGTLFYTTIGTLTK-SDNMLRTMFSGRMEVLTDS-EGWILIDRCGKHFGTILNYL 447
V ++VGGT++ +++ TLTK ++ L +F+G++ ++ DS + IDR G F ILN++
Sbjct: 108 VHIDVGGTIYTSSLETLTKYPESKLAKLFNGQIPIVLDSLKQHYFIDRDGGMFRHILNFM 167
Query: 448 RDGTVALPDSYKEIMELLAEAKYFLIEELTESCLQALAK 564
R+ + + + + ++ LL EA+Y+ +E + + L+++ K
Sbjct: 168 RNSRLLIAEDFPDLELLLEEARYYEVEPMIKQ-LESMRK 205
>AE013599-3227|AAF46733.1| 338|Drosophila melanogaster CG10440-PA
protein.
Length = 338
Score = 59.3 bits (137), Expect = 6e-09
Identities = 31/99 (31%), Positives = 64/99 (64%), Gaps = 2/99 (2%)
Frame = +1
Query: 274 VKLNVGGTLFYTTIGTLTK-SDNMLRTMFSGRMEVLTDS-EGWILIDRCGKHFGTILNYL 447
V ++VGGT++ +++ TLTK ++ L +F+G++ ++ DS + IDR G F ILN++
Sbjct: 108 VHIDVGGTIYTSSLETLTKYPESKLAKLFNGQIPIVLDSLKQHYFIDRDGGMFRHILNFM 167
Query: 448 RDGTVALPDSYKEIMELLAEAKYFLIEELTESCLQALAK 564
R+ + + + + ++ LL EA+Y+ +E + + L+++ K
Sbjct: 168 RNSRLLIAEDFPDLELLLEEARYYEVEPMIKQ-LESMRK 205
>BT016086-1|AAV36971.1| 730|Drosophila melanogaster LD44003p
protein.
Length = 730
Score = 56.0 bits (129), Expect = 5e-08
Identities = 39/95 (41%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
Frame = +1
Query: 259 SPSQYVKLNVGGTLFYTTIGTLTK-SDNMLRTMFSGRMEVLTDSEGWILIDRCGKHFGTI 435
S S V LNVGG F T+ TLT D + SGR+ L D I IDR F I
Sbjct: 8 SSSDLVNLNVGGQRFSTSRQTLTWIPDTFFTALLSGRISSLRDEHNAIFIDRDPTLFSII 67
Query: 436 LNYLRDGTVALPDSYKEIMELLAEAKYFLIEELTE 540
LNYLR + + + EI L EA+Y+ I LT+
Sbjct: 68 LNYLRTKDIDIKNC--EIRALRHEAEYYGITPLTK 100
>AE014297-1048|AAF54457.1| 730|Drosophila melanogaster CG9467-PA
protein.
Length = 730
Score = 56.0 bits (129), Expect = 5e-08
Identities = 39/95 (41%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
Frame = +1
Query: 259 SPSQYVKLNVGGTLFYTTIGTLTK-SDNMLRTMFSGRMEVLTDSEGWILIDRCGKHFGTI 435
S S V LNVGG F T+ TLT D + SGR+ L D I IDR F I
Sbjct: 8 SSSDLVNLNVGGQRFSTSRQTLTWIPDTFFTALLSGRISSLRDEHNAIFIDRDPTLFSII 67
Query: 436 LNYLRDGTVALPDSYKEIMELLAEAKYFLIEELTE 540
LNYLR + + + EI L EA+Y+ I LT+
Sbjct: 68 LNYLRTKDIDIKNC--EIRALRHEAEYYGITPLTK 100
>BT024961-1|ABE01191.1| 1186|Drosophila melanogaster IP15272p protein.
Length = 1186
Score = 29.9 bits (64), Expect = 3.9
Identities = 20/74 (27%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Frame = +1
Query: 436 LNYLRDGTVALPDSYKEIMELLAEAKYFLIEELTESCLQALAKKEREAEPICRVPL-ITS 612
L+ ++ L + ++ +LA YF++ + + SCL+ LA REA+ +C + L I +
Sbjct: 1095 LHLFASKSLQLEELVPTLVGMLA-CNYFILRKASVSCLRQLA--HREAKEVCELALTINA 1151
Query: 613 QKEEQLLIMSTSKP 654
++ L+I P
Sbjct: 1152 EQLTDLVITEYGLP 1165
>BT023946-1|ABB36450.1| 2106|Drosophila melanogaster LD32003p protein.
Length = 2106
Score = 29.9 bits (64), Expect = 3.9
Identities = 20/74 (27%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Frame = +1
Query: 436 LNYLRDGTVALPDSYKEIMELLAEAKYFLIEELTESCLQALAKKEREAEPICRVPL-ITS 612
L+ ++ L + ++ +LA YF++ + + SCL+ LA REA+ +C + L I +
Sbjct: 1095 LHLFASKSLQLEELVPTLVGMLA-CNYFILRKASVSCLRQLA--HREAKEVCELALTINA 1151
Query: 613 QKEEQLLIMSTSKP 654
++ L+I P
Sbjct: 1152 EQLPDLVITEYGLP 1165
>BT023795-1|AAZ41804.1| 2154|Drosophila melanogaster GH08786p protein.
Length = 2154
Score = 29.9 bits (64), Expect = 3.9
Identities = 20/74 (27%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Frame = +1
Query: 436 LNYLRDGTVALPDSYKEIMELLAEAKYFLIEELTESCLQALAKKEREAEPICRVPL-ITS 612
L+ ++ L + ++ +LA YF++ + + SCL+ LA REA+ +C + L I +
Sbjct: 1143 LHLFASKSLQLEELVPTLVGMLA-CNYFILRKASVSCLRQLA--HREAKEVCELALTINA 1199
Query: 613 QKEEQLLIMSTSKP 654
++ L+I P
Sbjct: 1200 EQLPDLVITEYGLP 1213
>AE014297-689|AAF54180.1| 2117|Drosophila melanogaster CG2747-PB,
isoform B protein.
Length = 2117
Score = 29.9 bits (64), Expect = 3.9
Identities = 20/74 (27%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Frame = +1
Query: 436 LNYLRDGTVALPDSYKEIMELLAEAKYFLIEELTESCLQALAKKEREAEPICRVPL-ITS 612
L+ ++ L + ++ +LA YF++ + + SCL+ LA REA+ +C + L I +
Sbjct: 1106 LHLFASKSLQLEELVPTLVGMLA-CNYFILRKASVSCLRQLA--HREAKEVCELALTINA 1162
Query: 613 QKEEQLLIMSTSKP 654
++ L+I P
Sbjct: 1163 EQLPDLVITEYGLP 1176
>AE014297-688|AAG22133.2| 2165|Drosophila melanogaster CG2747-PA,
isoform A protein.
Length = 2165
Score = 29.9 bits (64), Expect = 3.9
Identities = 20/74 (27%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Frame = +1
Query: 436 LNYLRDGTVALPDSYKEIMELLAEAKYFLIEELTESCLQALAKKEREAEPICRVPL-ITS 612
L+ ++ L + ++ +LA YF++ + + SCL+ LA REA+ +C + L I +
Sbjct: 1154 LHLFASKSLQLEELVPTLVGMLA-CNYFILRKASVSCLRQLA--HREAKEVCELALTINA 1210
Query: 613 QKEEQLLIMSTSKP 654
++ L+I P
Sbjct: 1211 EQLPDLVITEYGLP 1224
>AY058252-1|AAL13481.1| 561|Drosophila melanogaster GH01404p
protein.
Length = 561
Score = 28.7 bits (61), Expect = 8.9
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1
Query: 469 PDSYKEIMELLAEAKYFLIEELTESCLQALAKKEREAEPI 588
P S KE+ + L + K F E ++ + + KKE + EPI
Sbjct: 173 PQSLKEVPKALKDRKGFKQENSKQTSISSFFKKEIKEEPI 212
>AF134239-1|AAD43051.1| 1057|Drosophila melanogaster Recq helicase 5
protein.
Length = 1057
Score = 28.7 bits (61), Expect = 8.9
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1
Query: 469 PDSYKEIMELLAEAKYFLIEELTESCLQALAKKEREAEPI 588
P S KE+ + L + K F E ++ + + KKE + EPI
Sbjct: 670 PQSLKEVPKALKDRKGFKQENSKQTSISSFFKKEIKEEPI 709
>AE014296-2400|AAN11801.1| 1058|Drosophila melanogaster CG4879-PB,
isoform B protein.
Length = 1058
Score = 28.7 bits (61), Expect = 8.9
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1
Query: 469 PDSYKEIMELLAEAKYFLIEELTESCLQALAKKEREAEPI 588
P S KE+ + L + K F E ++ + + KKE + EPI
Sbjct: 670 PQSLKEVPKALKDRKGFKQENSKQTSISSFFKKEIKEEPI 709
>AB031087-1|BAA88313.1| 1058|Drosophila melanogaster DNA helicase
RECQE protein.
Length = 1058
Score = 28.7 bits (61), Expect = 8.9
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1
Query: 469 PDSYKEIMELLAEAKYFLIEELTESCLQALAKKEREAEPI 588
P S KE+ + L + K F E ++ + + KKE + EPI
Sbjct: 670 PQSLKEVPKALKDRKGFKQENSKQTSISSFFKKEIKEEPI 709
>AB031086-1|BAA88312.1| 1058|Drosophila melanogaster DNA helicase
RECQE protein.
Length = 1058
Score = 28.7 bits (61), Expect = 8.9
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1
Query: 469 PDSYKEIMELLAEAKYFLIEELTESCLQALAKKEREAEPI 588
P S KE+ + L + K F E ++ + + KKE + EPI
Sbjct: 670 PQSLKEVPKALKDRKGFKQENSKQTSISSFFKKEIKEEPI 709
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,026,236
Number of Sequences: 53049
Number of extensions: 656847
Number of successful extensions: 1565
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1502
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1550
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3417159966
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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