Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0884
         (700 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023407-1|AAY55823.1|  475|Drosophila melanogaster IP10431p pro...    34   0.16 
AE013599-1503|AAF58501.4|  475|Drosophila melanogaster CG12370-P...    34   0.16 
BT001389-1|AAN71144.1|  374|Drosophila melanogaster GH04919p pro...    30   2.6  
AE014297-342|AAF51960.1|  374|Drosophila melanogaster CG2091-PA ...    30   2.6  

>BT023407-1|AAY55823.1|  475|Drosophila melanogaster IP10431p
           protein.
          Length = 475

 Score = 34.3 bits (75), Expect = 0.16
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = -2

Query: 264 CPSLCTTLWSILSKFCPNLCTMFWSNLSILCPKRWAKFKSIVW 136
           CP++C  +WSI   F P+L    ++ L I C   W +   I W
Sbjct: 279 CPAVCILVWSIAKAFAPHLENEHFNGLEIDC--AWMRESHIDW 319


>AE013599-1503|AAF58501.4|  475|Drosophila melanogaster CG12370-PA
           protein.
          Length = 475

 Score = 34.3 bits (75), Expect = 0.16
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = -2

Query: 264 CPSLCTTLWSILSKFCPNLCTMFWSNLSILCPKRWAKFKSIVW 136
           CP++C  +WSI   F P+L    ++ L I C   W +   I W
Sbjct: 279 CPAVCILVWSIAKAFAPHLENEHFNGLEIDC--AWMRESHIDW 319


>BT001389-1|AAN71144.1|  374|Drosophila melanogaster GH04919p
           protein.
          Length = 374

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = -2

Query: 543 YILDLMIGNIESLKI*YTYTQL-HTTFTGNSLIFHY*NHLPLNPLTLSKD 397
           ++LD +I N+E +   Y    L    + GN L+  Y   LP+  LT+S D
Sbjct: 276 HMLDTVINNLELMPDYYQRATLPFVLYEGNKLLDLYEQELPIRALTVSSD 325


>AE014297-342|AAF51960.1|  374|Drosophila melanogaster CG2091-PA
           protein.
          Length = 374

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = -2

Query: 543 YILDLMIGNIESLKI*YTYTQL-HTTFTGNSLIFHY*NHLPLNPLTLSKD 397
           ++LD +I N+E +   Y    L    + GN L+  Y   LP+  LT+S D
Sbjct: 276 HMLDTVINNLELMPDYYQRATLPFVLYEGNKLLDLYEQELPIRALTVSSD 325


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,278,468
Number of Sequences: 53049
Number of extensions: 664512
Number of successful extensions: 1771
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1683
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1771
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)