Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0879
         (650 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical pr...    30   1.2  
Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical pr...    30   1.2  
L23647-8|AAK29993.1|   54|Caenorhabditis elegans Hypothetical pr...    30   1.2  
L07144-2|AAK21439.1|   54|Caenorhabditis elegans Hypothetical pr...    30   1.2  
DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein.      30   1.2  
AC084153-7|AAK84593.1|  451|Caenorhabditis elegans Hypothetical ...    28   6.6  
Z74473-7|CAA98952.1| 3871|Caenorhabditis elegans Hypothetical pr...    27   8.7  
Z74046-5|CAA98557.1| 3871|Caenorhabditis elegans Hypothetical pr...    27   8.7  
AF016427-2|AAB65352.1|   54|Caenorhabditis elegans Hypothetical ...    27   8.7  

>Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical
           protein ZK520.3a protein.
          Length = 1383

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = +1

Query: 346 DYANHINDAQNSTNQLIDFVCYKDGDRIALFIAEGG 453
           D   ++ DA N T +LID    K+GD +A+ +A  G
Sbjct: 62  DKKGNVIDALNPTGKLIDIAWDKEGDVLAIAVANTG 97


>Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical
           protein ZK520.3a protein.
          Length = 1383

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = +1

Query: 346 DYANHINDAQNSTNQLIDFVCYKDGDRIALFIAEGG 453
           D   ++ DA N T +LID    K+GD +A+ +A  G
Sbjct: 62  DKKGNVIDALNPTGKLIDIAWDKEGDVLAIAVANTG 97


>L23647-8|AAK29993.1|   54|Caenorhabditis elegans Hypothetical
           protein ZC262.5 protein.
          Length = 54

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 18/38 (47%), Positives = 22/38 (57%)
 Frame = +1

Query: 58  AAGVLADDFSQITAVVTSQCTKNNAEDKVPEVEAALRT 171
           AAG+    +SQI A V  QCTK  A  K P  +A L+T
Sbjct: 6   AAGLNYVRYSQIAAQVVRQCTKGGANVKKP--QATLKT 41


>L07144-2|AAK21439.1|   54|Caenorhabditis elegans Hypothetical
           protein R05D3.6 protein.
          Length = 54

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 18/38 (47%), Positives = 22/38 (57%)
 Frame = +1

Query: 58  AAGVLADDFSQITAVVTSQCTKNNAEDKVPEVEAALRT 171
           AAG+    +SQI A V  QCTK  A  K P  +A L+T
Sbjct: 6   AAGLNYVRYSQIAAQVVRQCTKGGANVKKP--QATLKT 41


>DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein.
          Length = 1383

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = +1

Query: 346 DYANHINDAQNSTNQLIDFVCYKDGDRIALFIAEGG 453
           D   ++ DA N T +LID    K+GD +A+ +A  G
Sbjct: 62  DKKGNVIDALNPTGKLIDIAWDKEGDVLAIAVANTG 97


>AC084153-7|AAK84593.1|  451|Caenorhabditis elegans Hypothetical
           protein Y22D7AL.4 protein.
          Length = 451

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = +1

Query: 145 PEVEAALRTFGNCLKGLVDLNVLKTEIEEAKPN 243
           PE E  +RT G+   G++D+N  +   + A+PN
Sbjct: 64  PEFEVEIRTNGHIYAGILDINGAEPGDKGAEPN 96


>Z74473-7|CAA98952.1| 3871|Caenorhabditis elegans Hypothetical protein
            ZC116.3 protein.
          Length = 3871

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -1

Query: 605  EGFHDTXGHLINFCAFFNKAQVMPDSTVGKLC 510
            E FHD     I F   F+ + +M + T+GK C
Sbjct: 3308 EAFHDCSADYIEF---FDSSDIMANKTLGKFC 3336


>Z74046-5|CAA98557.1| 3871|Caenorhabditis elegans Hypothetical protein
            ZC116.3 protein.
          Length = 3871

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -1

Query: 605  EGFHDTXGHLINFCAFFNKAQVMPDSTVGKLC 510
            E FHD     I F   F+ + +M + T+GK C
Sbjct: 3308 EAFHDCSADYIEF---FDSSDIMANKTLGKFC 3336


>AF016427-2|AAB65352.1|   54|Caenorhabditis elegans Hypothetical
           protein F32D1.2 protein.
          Length = 54

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
 Frame = +1

Query: 58  AAGVLADDFSQITAVVTSQCTK---NNAEDKVPEVEAALRTFGN 180
           AAG+    +SQI A +T +CTK     A  K PE    + T+ N
Sbjct: 6   AAGLNYVRYSQIAAEITRKCTKQVGGKAAVKKPEATLKITTWEN 49


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,941,972
Number of Sequences: 27780
Number of extensions: 274336
Number of successful extensions: 741
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 710
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 741
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)