Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0877
         (570 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT022699-1|AAY55115.1|  237|Drosophila melanogaster IP07649p pro...    29   3.3  
AE013599-1468|AAF58523.1|  236|Drosophila melanogaster CG13155-P...    29   3.3  

>BT022699-1|AAY55115.1|  237|Drosophila melanogaster IP07649p
           protein.
          Length = 237

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +1

Query: 520 YIPTDEGKYIHIPNPY 567
           Y+P D GKY H P PY
Sbjct: 50  YVPDDSGKYRHDPRPY 65


>AE013599-1468|AAF58523.1|  236|Drosophila melanogaster CG13155-PA
           protein.
          Length = 236

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +1

Query: 520 YIPTDEGKYIHIPNPY 567
           Y+P D GKY H P PY
Sbjct: 49  YVPDDSGKYRHDPRPY 64


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,278,197
Number of Sequences: 53049
Number of extensions: 302559
Number of successful extensions: 662
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 641
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 662
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2234671092
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)