Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0876
         (599 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY825711-1|AAV70274.1|  159|Anopheles gambiae subtilase serine p...    27   0.35 
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    25   1.9  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           25   2.5  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    24   4.3  
AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical prot...    23   5.7  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         23   7.5  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         23   7.5  
U89803-1|AAD03794.1|  250|Anopheles gambiae Tc1-like transposase...    23   10.0 

>AY825711-1|AAV70274.1|  159|Anopheles gambiae subtilase serine
           protease protein.
          Length = 159

 Score = 27.5 bits (58), Expect = 0.35
 Identities = 17/62 (27%), Positives = 31/62 (50%)
 Frame = +3

Query: 12  TSCSSDKGHSAGNGDSAWNGDSIWRGESERNSDSLERAGSVSNGDSVGRGDSRADKFSLG 191
           T  ++   ++A NG+S  N  S   G +   + +    GSV NG +V    S+ D++  G
Sbjct: 36  TGAANAVTNNATNGNSVANAGSNGTGNNVIAATNGAANGSVPNGTAVKENRSKWDEYCEG 95

Query: 192 VK 197
           ++
Sbjct: 96  LR 97


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 18/69 (26%), Positives = 30/69 (43%)
 Frame = +3

Query: 33  GHSAGNGDSAWNGDSIWRGESERNSDSLERAGSVSNGDSVGRGDSRADKFSLGVKVSLGL 212
           G  + NG     G    RGE ++    L   G+  N ++ G G+ +         V+ G 
Sbjct: 39  GPGSNNGQEGLKGPGGARGELKQFDLPLGNTGNSGNNNNNGVGNHQQQP----SPVNEGT 94

Query: 213 GELANNSNS 239
           G+  NN+N+
Sbjct: 95  GKTNNNNNN 103


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -2

Query: 598 TGTKSNNPNREETSXNKN 545
           TGTK  NP+  + S N+N
Sbjct: 523 TGTKKRNPSSNDRSPNQN 540


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -2

Query: 76  ESPFHAESPLPAECPLSDE 20
           E PF+A SPL ++   SDE
Sbjct: 89  EKPFYAPSPLGSDSYASDE 107


>AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical protein
           protein.
          Length = 278

 Score = 23.4 bits (48), Expect = 5.7
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = -2

Query: 88  PLHIESPFHAESPLPAECPLSDEHDVPV 5
           P+ +E PF  E     E P+   + VPV
Sbjct: 233 PIEVEKPFPVEVLKKFEVPVPKPYPVPV 260


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = -2

Query: 115 KESLLRSDSPLHIESPFHAESPLPAECPLSDEH 17
           K+  L SD P+  + P H + P   + P    H
Sbjct: 77  KQEPLGSDGPMPAQPPHHHQHPHHHQLPHHPHH 109


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = -2

Query: 115 KESLLRSDSPLHIESPFHAESPLPAECPLSDEH 17
           K+  L SD P+  + P H + P   + P    H
Sbjct: 77  KQEPLGSDGPMPAQPPHHHQHPHHHQLPHHPHH 109


>U89803-1|AAD03794.1|  250|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 250

 Score = 22.6 bits (46), Expect = 10.0
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = +1

Query: 511 LR*PATLKSSTDFCFXMFLHGWGYLILF 594
           +R P        +CF  F HG G L+++
Sbjct: 79  VRRPVNCALDPKYCFKTFKHGGGSLMVW 106


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 581,595
Number of Sequences: 2352
Number of extensions: 10714
Number of successful extensions: 68
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 68
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58029966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)