Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0876
(599 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110477-8|CAB76739.1| 1042|Caenorhabditis elegans Hypothetical ... 36 0.017
Z14148-2|CAA78521.1| 679|Caenorhabditis elegans hypothetical po... 31 0.63
Z14148-1|CAA78520.1| 854|Caenorhabditis elegans hypothetical po... 31 0.63
Z14146-2|CAA78517.1| 679|Caenorhabditis elegans hypothetical pr... 31 0.63
Z14146-1|CAA78516.1| 854|Caenorhabditis elegans unc-33 protein. 31 0.63
AC006737-1|AAM97965.1| 854|Caenorhabditis elegans Uncoordinated... 31 0.63
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 31 0.83
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 31 0.83
Z81105-3|CAB03217.1| 316|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z75711-10|CAK55176.1| 400|Caenorhabditis elegans Hypothetical p... 29 3.3
Z75711-9|CAK55175.1| 331|Caenorhabditis elegans Hypothetical pr... 29 3.3
DQ185512-1|ABA28304.1| 400|Caenorhabditis elegans AXL-1 protein. 29 3.3
Z73098-2|CAA97331.2| 1058|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical pr... 27 7.7
Z68008-4|CAA92000.4| 1137|Caenorhabditis elegans Hypothetical pr... 27 7.7
U61288-1|AAB17543.1| 790|Caenorhabditis elegans CE protein. 27 7.7
>AL110477-8|CAB76739.1| 1042|Caenorhabditis elegans Hypothetical
protein Y113G7B.12 protein.
Length = 1042
Score = 36.3 bits (80), Expect = 0.017
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +3
Query: 24 SDKGHSAGNGDSAWNGDSIWRGESERNSDSLERAGSVSNGDSVGRGDSRADKFSLGVKVS 203
SD G GNG+++ NGD GE+ N + + + NG+ G+ + G +
Sbjct: 216 SDNGEERGNGEASDNGDESDNGEASDNGEESDNEEASDNGEESDNGEESDNGEERGNGEA 275
Query: 204 LGLGELANNSN-SFAGEE 254
G+ ++N S GEE
Sbjct: 276 SDNGDESDNGEASDNGEE 293
Score = 36.3 bits (80), Expect = 0.017
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +3
Query: 24 SDKGHSAGNGDSAWNGDSIWRGESERNSDSLERAGSVSNGDSVGRGDSRADKFSLGVKVS 203
SD G GNG+++ NGD GE+ N + + + NG+ G++ + + +
Sbjct: 264 SDNGEERGNGEASDNGDESDNGEASDNGEESDNEEASDNGEESDNGEASDNGEESDNEEA 323
Query: 204 LGLGELANNSN-SFAGEE 254
GE ++N S GEE
Sbjct: 324 SDNGEESDNGEASDNGEE 341
Score = 34.3 bits (75), Expect = 0.067
Identities = 16/67 (23%), Positives = 33/67 (49%)
Frame = +3
Query: 21 SSDKGHSAGNGDSAWNGDSIWRGESERNSDSLERAGSVSNGDSVGRGDSRADKFSLGVKV 200
+SD G + N +++ NG+ GE+ N + + NG++ G+ + +G+K
Sbjct: 311 ASDNGEESDNEEASDNGEESDNGEASDNGEESDNGEERDNGEASDNGEESENGEEIGLKF 370
Query: 201 SLGLGEL 221
S+ L +
Sbjct: 371 SVLLANV 377
Score = 32.7 bits (71), Expect = 0.21
Identities = 18/78 (23%), Positives = 34/78 (43%)
Frame = +3
Query: 21 SSDKGHSAGNGDSAWNGDSIWRGESERNSDSLERAGSVSNGDSVGRGDSRADKFSLGVKV 200
+SD G + NG+ + N ++ GE+ N + + + NG+ G+ R + +
Sbjct: 173 ASDNGEESDNGEESDNEEASDNGEASDNGEESDNEEASDNGEESDNGEERGNGEASDNGD 232
Query: 201 SLGLGELANNSNSFAGEE 254
GE ++N EE
Sbjct: 233 ESDNGEASDNGEESDNEE 250
Score = 32.3 bits (70), Expect = 0.27
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = +3
Query: 9 GTSCSSDKGHSAGNGDSAWNGDSIWRGESERNSDSLERAGSVSNGDSVGRGDS 167
G +SD G + NG+++ NG+ E+ N + + NG+ G G++
Sbjct: 223 GNGEASDNGDESDNGEASDNGEESDNEEASDNGEESDNGEESDNGEERGNGEA 275
Score = 32.3 bits (70), Expect = 0.27
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +3
Query: 21 SSDKGHSAGNGDSAWNGDSIWRGESERNSDSLERAGSVSNGD 146
+SD G + NG+ + NG+ GE+ N D + + NG+
Sbjct: 251 ASDNGEESDNGEESDNGEERGNGEASDNGDESDNGEASDNGE 292
Score = 31.5 bits (68), Expect = 0.48
Identities = 13/50 (26%), Positives = 25/50 (50%)
Frame = +3
Query: 21 SSDKGHSAGNGDSAWNGDSIWRGESERNSDSLERAGSVSNGDSVGRGDSR 170
+SD G + NG+++ NG+ E+ N + + + NG+ G+ R
Sbjct: 299 ASDNGEESDNGEASDNGEESDNEEASDNGEESDNGEASDNGEESDNGEER 348
Score = 30.7 bits (66), Expect = 0.83
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Frame = +3
Query: 21 SSDKGHSAGNGDSAWNGDSIWRGESERNSDSLERAGSVSNGDSVGRGDSRADKFSLGVKV 200
+SD G + N +++ NG+ GE+ N + + + NG+ G++ +
Sbjct: 287 ASDNGEESDNEEASDNGEESDNGEASDNGEESDNEEASDNGEESDNGEASDNGEESDNGE 346
Query: 201 SLGLGELANN-SNSFAGEEI 257
GE ++N S GEEI
Sbjct: 347 ERDNGEASDNGEESENGEEI 366
Score = 29.9 bits (64), Expect = 1.5
Identities = 20/79 (25%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Frame = +3
Query: 21 SSDKGHSAGNGDSAWNGDSIWRGESERNSDSLERAGSVSNGDSVGRGDSRADKFSLGVKV 200
+SD G + N +++ NG+ GE N + + NGD G++ + +
Sbjct: 239 ASDNGEESDNEEASDNGEESDNGEESDNGEERGNGEASDNGDESDNGEASDNGEESDNEE 298
Query: 201 SLGLGELANNSN-SFAGEE 254
+ GE ++N S GEE
Sbjct: 299 ASDNGEESDNGEASDNGEE 317
Score = 29.5 bits (63), Expect = 1.9
Identities = 15/72 (20%), Positives = 31/72 (43%)
Frame = +3
Query: 21 SSDKGHSAGNGDSAWNGDSIWRGESERNSDSLERAGSVSNGDSVGRGDSRADKFSLGVKV 200
+SD G + NG+ NG++ G+ N ++ + N ++ G+ +
Sbjct: 209 ASDNGEESDNGEERGNGEASDNGDESDNGEASDNGEESDNEEASDNGEESDNGEESDNGE 268
Query: 201 SLGLGELANNSN 236
G GE ++N +
Sbjct: 269 ERGNGEASDNGD 280
Score = 27.9 bits (59), Expect = 5.9
Identities = 12/46 (26%), Positives = 23/46 (50%)
Frame = +3
Query: 9 GTSCSSDKGHSAGNGDSAWNGDSIWRGESERNSDSLERAGSVSNGD 146
G +SD G + NG+++ NG+ E+ N + + + NG+
Sbjct: 271 GNGEASDNGDESDNGEASDNGEESDNEEASDNGEESDNGEASDNGE 316
>Z14148-2|CAA78521.1| 679|Caenorhabditis elegans hypothetical
polypeptide II protein.
Length = 679
Score = 31.1 bits (67), Expect = 0.63
Identities = 24/70 (34%), Positives = 38/70 (54%)
Frame = +3
Query: 15 SCSSDKGHSAGNGDSAWNGDSIWRGESERNSDSLERAGSVSNGDSVGRGDSRADKFSLGV 194
S SS KGH + +GDS NG++ RNS ++E ++G+S S A+K + G
Sbjct: 97 SSSSKKGHPSEDGDSTRNGET---PTDRRNSGAIE---ETADGES--SAQSAAEKKNSGD 148
Query: 195 KVSLGLGELA 224
+ G GE++
Sbjct: 149 DGNGGGGEMS 158
>Z14148-1|CAA78520.1| 854|Caenorhabditis elegans hypothetical
polypeptide I protein.
Length = 854
Score = 31.1 bits (67), Expect = 0.63
Identities = 24/70 (34%), Positives = 38/70 (54%)
Frame = +3
Query: 15 SCSSDKGHSAGNGDSAWNGDSIWRGESERNSDSLERAGSVSNGDSVGRGDSRADKFSLGV 194
S SS KGH + +GDS NG++ RNS ++E ++G+S S A+K + G
Sbjct: 272 SSSSKKGHPSEDGDSTRNGET---PTDRRNSGAIE---ETADGES--SAQSAAEKKNSGD 323
Query: 195 KVSLGLGELA 224
+ G GE++
Sbjct: 324 DGNGGGGEMS 333
>Z14146-2|CAA78517.1| 679|Caenorhabditis elegans hypothetical
protein.
Length = 679
Score = 31.1 bits (67), Expect = 0.63
Identities = 24/70 (34%), Positives = 38/70 (54%)
Frame = +3
Query: 15 SCSSDKGHSAGNGDSAWNGDSIWRGESERNSDSLERAGSVSNGDSVGRGDSRADKFSLGV 194
S SS KGH + +GDS NG++ RNS ++E ++G+S S A+K + G
Sbjct: 97 SSSSKKGHPSEDGDSTRNGET---PTDRRNSGAIE---ETADGES--SAQSAAEKKNSGD 148
Query: 195 KVSLGLGELA 224
+ G GE++
Sbjct: 149 DGNGGGGEMS 158
>Z14146-1|CAA78516.1| 854|Caenorhabditis elegans unc-33 protein.
Length = 854
Score = 31.1 bits (67), Expect = 0.63
Identities = 24/70 (34%), Positives = 38/70 (54%)
Frame = +3
Query: 15 SCSSDKGHSAGNGDSAWNGDSIWRGESERNSDSLERAGSVSNGDSVGRGDSRADKFSLGV 194
S SS KGH + +GDS NG++ RNS ++E ++G+S S A+K + G
Sbjct: 272 SSSSKKGHPSEDGDSTRNGET---PTDRRNSGAIE---ETADGES--SAQSAAEKKNSGD 323
Query: 195 KVSLGLGELA 224
+ G GE++
Sbjct: 324 DGNGGGGEMS 333
>AC006737-1|AAM97965.1| 854|Caenorhabditis elegans Uncoordinated
protein 33 protein.
Length = 854
Score = 31.1 bits (67), Expect = 0.63
Identities = 24/70 (34%), Positives = 38/70 (54%)
Frame = +3
Query: 15 SCSSDKGHSAGNGDSAWNGDSIWRGESERNSDSLERAGSVSNGDSVGRGDSRADKFSLGV 194
S SS KGH + +GDS NG++ RNS ++E ++G+S S A+K + G
Sbjct: 272 SSSSKKGHPSEDGDSTRNGET---PTDRRNSGAIE---ETADGES--SAQSAAEKKNSGD 323
Query: 195 KVSLGLGELA 224
+ G GE++
Sbjct: 324 DGNGGGGEMS 333
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.7 bits (66), Expect = 0.83
Identities = 22/57 (38%), Positives = 27/57 (47%)
Frame = +3
Query: 3 STGTSCSSDKGHSAGNGDSAWNGDSIWRGESERNSDSLERAGSVSNGDSVGRGDSRA 173
S G S SS G + GDS+ + S G SDS + S S G S G GD+ A
Sbjct: 366 SGGDSSSSSGGGYSSGGDSSSSSSS--SGGYSGGSDSSSSSSSSSGGYSSGGGDAGA 420
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.7 bits (66), Expect = 0.83
Identities = 22/57 (38%), Positives = 27/57 (47%)
Frame = +3
Query: 3 STGTSCSSDKGHSAGNGDSAWNGDSIWRGESERNSDSLERAGSVSNGDSVGRGDSRA 173
S G S SS G + GDS+ + S G SDS + S S G S G GD+ A
Sbjct: 366 SGGDSSSSSGGGYSSGGDSSSSSSS--SGGYSGGSDSSSSSSSSSGGYSSGGGDAGA 420
>Z81105-3|CAB03217.1| 316|Caenorhabditis elegans Hypothetical
protein R05D7.3 protein.
Length = 316
Score = 29.5 bits (63), Expect = 1.9
Identities = 16/36 (44%), Positives = 24/36 (66%), Gaps = 3/36 (8%)
Frame = -3
Query: 480 QPMTKKTLL-QIFTLKNPKIFSLKF--HLNTQCPLK 382
Q + KK+L +IF +KN KI S+ F H++ +C LK
Sbjct: 14 QKIKKKSLFSEIFAVKNFKIISINFKTHVSQKCKLK 49
>Z75711-10|CAK55176.1| 400|Caenorhabditis elegans Hypothetical
protein K02B12.4b protein.
Length = 400
Score = 28.7 bits (61), Expect = 3.3
Identities = 23/84 (27%), Positives = 35/84 (41%)
Frame = +3
Query: 3 STGTSCSSDKGHSAGNGDSAWNGDSIWRGESERNSDSLERAGSVSNGDSVGRGDSRADKF 182
ST T+ + A + S+ G +IW N D+++++ G S +S D+F
Sbjct: 122 STTTADVNTTWEDASSTSSSNKGATIWF-----NEDAIDKSSRHEIGQSTVTHESEDDRF 176
Query: 183 SLGVKVSLGLGELANNSNSFAGEE 254
S V L L NS EE
Sbjct: 177 SFFNAVCTRLNSLQETKNSSETEE 200
>Z75711-9|CAK55175.1| 331|Caenorhabditis elegans Hypothetical
protein K02B12.4a protein.
Length = 331
Score = 28.7 bits (61), Expect = 3.3
Identities = 23/84 (27%), Positives = 35/84 (41%)
Frame = +3
Query: 3 STGTSCSSDKGHSAGNGDSAWNGDSIWRGESERNSDSLERAGSVSNGDSVGRGDSRADKF 182
ST T+ + A + S+ G +IW N D+++++ G S +S D+F
Sbjct: 53 STTTADVNTTWEDASSTSSSNKGATIWF-----NEDAIDKSSRHEIGQSTVTHESEDDRF 107
Query: 183 SLGVKVSLGLGELANNSNSFAGEE 254
S V L L NS EE
Sbjct: 108 SFFNAVCTRLNSLQETKNSSETEE 131
>DQ185512-1|ABA28304.1| 400|Caenorhabditis elegans AXL-1 protein.
Length = 400
Score = 28.7 bits (61), Expect = 3.3
Identities = 23/84 (27%), Positives = 35/84 (41%)
Frame = +3
Query: 3 STGTSCSSDKGHSAGNGDSAWNGDSIWRGESERNSDSLERAGSVSNGDSVGRGDSRADKF 182
ST T+ + A + S+ G +IW N D+++++ G S +S D+F
Sbjct: 122 STTTADVNTTWEDASSTSSSNKGATIWF-----NEDAIDKSSRHEIGQSTVTHESEDDRF 176
Query: 183 SLGVKVSLGLGELANNSNSFAGEE 254
S V L L NS EE
Sbjct: 177 SFFNAVCTRLNSLQETKNSSETEE 200
>Z73098-2|CAA97331.2| 1058|Caenorhabditis elegans Hypothetical
protein T21C9.2 protein.
Length = 1058
Score = 27.9 bits (59), Expect = 5.9
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +3
Query: 54 DSAWNGDSIWRGESERNSDSLERAGSVSNGD-SVGRGDSRAD 176
DSA++ GES R +++RA +S+ D VG GD R D
Sbjct: 195 DSAFDSYCQSAGESYRRYQAIKRALRLSHADGGVGIGDERQD 236
>Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical
protein R08B4.1b protein.
Length = 1160
Score = 27.5 bits (58), Expect = 7.7
Identities = 18/55 (32%), Positives = 24/55 (43%)
Frame = +3
Query: 9 GTSCSSDKGHSAGNGDSAWNGDSIWRGESERNSDSLERAGSVSNGDSVGRGDSRA 173
G + G AGNG+ A G+ G N AG+ NG+ G GD+ A
Sbjct: 848 GAGAGNGNGAGAGNGNGAGAGNGNGAGAGNGNG-----AGA-GNGNGAGAGDASA 896
>Z68008-4|CAA92000.4| 1137|Caenorhabditis elegans Hypothetical
protein R08B4.1a protein.
Length = 1137
Score = 27.5 bits (58), Expect = 7.7
Identities = 14/47 (29%), Positives = 17/47 (36%)
Frame = +3
Query: 33 GHSAGNGDSAWNGDSIWRGESERNSDSLERAGSVSNGDSVGRGDSRA 173
G GNG A NG+ G NG+ G GD+ A
Sbjct: 827 GAGNGNGAGAGNGNGAGAGNGNGAGAGNGNGAGAGNGNGAGAGDASA 873
>U61288-1|AAB17543.1| 790|Caenorhabditis elegans CE protein.
Length = 790
Score = 27.5 bits (58), Expect = 7.7
Identities = 14/47 (29%), Positives = 17/47 (36%)
Frame = +3
Query: 33 GHSAGNGDSAWNGDSIWRGESERNSDSLERAGSVSNGDSVGRGDSRA 173
G GNG A NG+ G NG+ G GD+ A
Sbjct: 480 GAGNGNGAGAGNGNGAGAGNGNGAGAGNGNGAGAGNGNGAGAGDASA 526
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,008,712
Number of Sequences: 27780
Number of extensions: 260325
Number of successful extensions: 922
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 836
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 898
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1279376318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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