Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0875
         (730 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M34394-1|AAA28976.1| 1275|Drosophila melanogaster protein ( D.me...    31   2.1  
M21306-1|AAA56928.1| 1274|Drosophila melanogaster photoreceptor ...    31   2.1  
BT025806-1|ABF85706.1|  620|Drosophila melanogaster IP01548p pro...    31   2.1  
AE014297-4482|AAF56970.1| 1275|Drosophila melanogaster CG7875-PA...    31   2.1  

>M34394-1|AAA28976.1| 1275|Drosophila melanogaster protein (
            D.melanogaster trp proteingene, complete cds. ).
          Length = 1275

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
 Frame = +1

Query: 49   PEGVGMEPRAIHPGMKFSIT----GNGGLLGEASVFRADLPQVEEKTEYVDVPGTRGKAV 216
            P G G +      G K SIT    G G  +  A+  RA +  V+EK+     PGT GK  
Sbjct: 944  PNGEGEKKPLDASGSKKSITSGGTGGGASMLAAAALRASVKNVDEKSGADGKPGTMGKPT 1003

Query: 217  E 219
            +
Sbjct: 1004 D 1004


>M21306-1|AAA56928.1| 1274|Drosophila melanogaster photoreceptor
            membrane-associatedprotein protein.
          Length = 1274

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
 Frame = +1

Query: 49   PEGVGMEPRAIHPGMKFSIT----GNGGLLGEASVFRADLPQVEEKTEYVDVPGTRGKAV 216
            P G G +      G K SIT    G G  +  A+  RA +  V+EK+     PGT GK  
Sbjct: 943  PNGEGEKKPLDASGSKKSITSGGTGGGASMLAAAALRASVKNVDEKSGADGKPGTMGKPT 1002

Query: 217  E 219
            +
Sbjct: 1003 D 1003


>BT025806-1|ABF85706.1|  620|Drosophila melanogaster IP01548p
           protein.
          Length = 620

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
 Frame = +1

Query: 49  PEGVGMEPRAIHPGMKFSIT----GNGGLLGEASVFRADLPQVEEKTEYVDVPGTRGKAV 216
           P G G +      G K SIT    G G  +  A+  RA +  V+EK+     PGT GK  
Sbjct: 289 PNGEGEKKPLDASGSKKSITSGGTGGGASMLAAAALRASVKNVDEKSGADGKPGTMGKPT 348

Query: 217 E 219
           +
Sbjct: 349 D 349


>AE014297-4482|AAF56970.1| 1275|Drosophila melanogaster CG7875-PA
            protein.
          Length = 1275

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
 Frame = +1

Query: 49   PEGVGMEPRAIHPGMKFSIT----GNGGLLGEASVFRADLPQVEEKTEYVDVPGTRGKAV 216
            P G G +      G K SIT    G G  +  A+  RA +  V+EK+     PGT GK  
Sbjct: 944  PNGEGEKKPLDASGSKKSITSGGTGGGASMLAAAALRASVKNVDEKSGADGKPGTMGKPT 1003

Query: 217  E 219
            +
Sbjct: 1004 D 1004


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,599,435
Number of Sequences: 53049
Number of extensions: 815587
Number of successful extensions: 2195
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2090
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2191
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3273062859
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)