Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0872
         (791 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-2754|ABC66050.1|  119|Drosophila melanogaster CG33998-P...    62   6e-10
BT023029-1|AAY55445.1|  112|Drosophila melanogaster IP04046p pro...    46   6e-05
AE013599-1627|AAF58432.1|  112|Drosophila melanogaster CG13323-P...    46   6e-05
AE013599-1628|AAF58431.1|  112|Drosophila melanogaster CG13324-P...    45   1e-04
AE014298-1339|ABC67180.1|  117|Drosophila melanogaster CG34026-P...    43   4e-04
AE014134-2946|AAN11008.1|  117|Drosophila melanogaster CG31789-P...    40   0.005
AY113466-1|AAM29471.1|  163|Drosophila melanogaster RE41194p pro...    35   0.11 
AE014298-2728|AAF48850.1|  163|Drosophila melanogaster CG15043-P...    35   0.11 
AE013599-3573|AAM68241.1|  122|Drosophila melanogaster CG30413-P...    32   0.78 
AY071266-1|AAL48888.1|  160|Drosophila melanogaster RE30049p pro...    31   1.4  
AE014298-2727|AAF48849.2|  160|Drosophila melanogaster CG15044-P...    31   1.4  

>AE013599-2754|ABC66050.1|  119|Drosophila melanogaster CG33998-PA
           protein.
          Length = 119

 Score = 62.5 bits (145), Expect = 6e-10
 Identities = 37/98 (37%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
 Frame = +1

Query: 7   SHDLSLGQLTYRDIVLYK-INEYKYGFPFIVRTSEIEYPEPGQQNFAYISAIYVKDHYTD 183
           SH ++ G  TYRD+ L++ I   K  F  +V T E  + +  ++    I+ I + D   D
Sbjct: 24  SHSITWGARTYRDMHLHREIITEKSKFLRVV-TREFVFDQ--KKLARTITQIVITDQIRD 80

Query: 184 GNGGYPIVKSGGVGQKFVKLKLKSQRGHGFNFTVTIYG 297
           GNGGY  + +GG    + K+ LKSQR  GF+F + IYG
Sbjct: 81  GNGGYAYLTAGGPQTTYAKIHLKSQRNQGFSFIIDIYG 118


>BT023029-1|AAY55445.1|  112|Drosophila melanogaster IP04046p
           protein.
          Length = 112

 Score = 46.0 bits (104), Expect = 6e-05
 Identities = 21/54 (38%), Positives = 32/54 (59%)
 Frame = +1

Query: 139 FAYISAIYVKDHYTDGNGGYPIVKSGGVGQKFVKLKLKSQRGHGFNFTVTIYGK 300
           F  ISA+ V D++ + +G  P + SGG G +F  + L+ Q   G N TV I+G+
Sbjct: 59  FYNISAVIVYDNFKNNSGASPSLYSGGPGYRFATVNLRGQVNRGINSTVEIWGR 112


>AE013599-1627|AAF58432.1|  112|Drosophila melanogaster CG13323-PA
           protein.
          Length = 112

 Score = 46.0 bits (104), Expect = 6e-05
 Identities = 21/54 (38%), Positives = 32/54 (59%)
 Frame = +1

Query: 139 FAYISAIYVKDHYTDGNGGYPIVKSGGVGQKFVKLKLKSQRGHGFNFTVTIYGK 300
           F  ISA+ V D++ + +G  P + SGG G +F  + L+ Q   G N TV I+G+
Sbjct: 59  FYNISAVIVYDNFKNNSGASPSLYSGGPGYRFATVNLRGQVNRGINSTVEIWGR 112


>AE013599-1628|AAF58431.1|  112|Drosophila melanogaster CG13324-PA
           protein.
          Length = 112

 Score = 45.2 bits (102), Expect = 1e-04
 Identities = 26/98 (26%), Positives = 46/98 (46%)
 Frame = +1

Query: 7   SHDLSLGQLTYRDIVLYKINEYKYGFPFIVRTSEIEYPEPGQQNFAYISAIYVKDHYTDG 186
           ++  + G+    D +L +  E +           + YP      F  ISA+ V D++ + 
Sbjct: 19  AYSATWGRRVNNDFLLSRTREVRNPIKNNYWNVNVNYPN----GFYNISAVIVYDNFKNN 74

Query: 187 NGGYPIVKSGGVGQKFVKLKLKSQRGHGFNFTVTIYGK 300
           +G  P + SGG G +F  + L+ Q   G + TV I+G+
Sbjct: 75  SGASPSLYSGGPGYRFATVNLRGQVNRGIDSTVEIWGR 112


>AE014298-1339|ABC67180.1|  117|Drosophila melanogaster CG34026-PA
           protein.
          Length = 117

 Score = 43.2 bits (97), Expect = 4e-04
 Identities = 28/98 (28%), Positives = 47/98 (47%)
 Frame = +1

Query: 7   SHDLSLGQLTYRDIVLYKINEYKYGFPFIVRTSEIEYPEPGQQNFAYISAIYVKDHYTDG 186
           ++D   G++   D  L K    K  F  +V+T +  + +    N   I+AI + D     
Sbjct: 21  ANDYLWGEVGADDYQLAKDTVSKAFFVGLVQTKKYVFKQSDNLNALTITAIKITDK-KKS 79

Query: 187 NGGYPIVKSGGVGQKFVKLKLKSQRGHGFNFTVTIYGK 300
           +G   ++ SGG G K   +K  S+RG+G    V I+G+
Sbjct: 80  HGATAVLVSGGPGSKGATIKFTSERGYGIKDIVEIWGR 117


>AE014134-2946|AAN11008.1|  117|Drosophila melanogaster CG31789-PA
           protein.
          Length = 117

 Score = 39.5 bits (88), Expect = 0.005
 Identities = 21/65 (32%), Positives = 32/65 (49%)
 Frame = +1

Query: 100 TSEIEYPEPGQQNFAYISAIYVKDHYTDGNGGYPIVKSGGVGQKFVKLKLKSQRGHGFNF 279
           +S I +P  GQ N   I  I + D +T+ +G Y  + SGG G    ++ + SQ   G N 
Sbjct: 50  SSLISFPLAGQSNTKTIRYISITDRFTNSSGPYSTLWSGGPGFINAQVNVTSQFSQGINV 109

Query: 280 TVTIY 294
           T   +
Sbjct: 110 TAQFW 114


>AY113466-1|AAM29471.1|  163|Drosophila melanogaster RE41194p
           protein.
          Length = 163

 Score = 35.1 bits (77), Expect = 0.11
 Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
 Frame = +1

Query: 76  YGFPFIVRTS-EIEYPEPGQ-QNFAYISAIYVKDHYTDGNGGYPIVKSGGVGQKFVKLKL 249
           Y FP     S ++ YPE G+    +Y+  +  +D     N G   V +GG+GQ  + + L
Sbjct: 90  YEFPRAQDVSLQLTYPENGKGATVSYVELLCTQDT----NEGTAYVVAGGIGQSLISIVL 145

Query: 250 KSQRGHGFNFTVTIYG 297
           +++    F++    YG
Sbjct: 146 EAKNTKNFSYQALYYG 161


>AE014298-2728|AAF48850.1|  163|Drosophila melanogaster CG15043-PA
           protein.
          Length = 163

 Score = 35.1 bits (77), Expect = 0.11
 Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
 Frame = +1

Query: 76  YGFPFIVRTS-EIEYPEPGQ-QNFAYISAIYVKDHYTDGNGGYPIVKSGGVGQKFVKLKL 249
           Y FP     S ++ YPE G+    +Y+  +  +D     N G   V +GG+GQ  + + L
Sbjct: 90  YEFPRAQDVSLQLTYPENGKGATVSYVELLCTQDT----NEGTAYVVAGGIGQSLISIVL 145

Query: 250 KSQRGHGFNFTVTIYG 297
           +++    F++    YG
Sbjct: 146 EAKNTKNFSYQALYYG 161


>AE013599-3573|AAM68241.1|  122|Drosophila melanogaster CG30413-PA
           protein.
          Length = 122

 Score = 32.3 bits (70), Expect = 0.78
 Identities = 15/31 (48%), Positives = 17/31 (54%)
 Frame = +1

Query: 205 VKSGGVGQKFVKLKLKSQRGHGFNFTVTIYG 297
           + SGGVG   V +K  S RG G    V IYG
Sbjct: 90  ITSGGVGSTTVTIKFTSARGAGIKSQVVIYG 120


>AY071266-1|AAL48888.1|  160|Drosophila melanogaster RE30049p
           protein.
          Length = 160

 Score = 31.5 bits (68), Expect = 1.4
 Identities = 19/63 (30%), Positives = 26/63 (41%)
 Frame = +1

Query: 109 IEYPEPGQQNFAYISAIYVKDHYTDGNGGYPIVKSGGVGQKFVKLKLKSQRGHGFNFTVT 288
           + YP          S     D   D  GGY  +  GG+GQ  V++ L S +   F +   
Sbjct: 99  MSYPAGASTGVTLTSIEVYVDMTADDAGGY--LTKGGIGQTNVEILLTSNQTRSFVYETF 156

Query: 289 IYG 297
           IYG
Sbjct: 157 IYG 159


>AE014298-2727|AAF48849.2|  160|Drosophila melanogaster CG15044-PA
           protein.
          Length = 160

 Score = 31.5 bits (68), Expect = 1.4
 Identities = 19/63 (30%), Positives = 26/63 (41%)
 Frame = +1

Query: 109 IEYPEPGQQNFAYISAIYVKDHYTDGNGGYPIVKSGGVGQKFVKLKLKSQRGHGFNFTVT 288
           + YP          S     D   D  GGY  +  GG+GQ  V++ L S +   F +   
Sbjct: 99  MSYPAGASTGVTLTSIEVYVDMTADDAGGY--LTKGGIGQTNVEILLTSNQTRSFVYETF 156

Query: 289 IYG 297
           IYG
Sbjct: 157 IYG 159


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,758,641
Number of Sequences: 53049
Number of extensions: 545520
Number of successful extensions: 1080
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1049
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1079
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3675273108
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)