Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0861
(650 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z29443-8|CAE45742.1| 455|Caenorhabditis elegans Hypothetical pr... 130 6e-31
Z29443-7|CAA82571.2| 497|Caenorhabditis elegans Hypothetical pr... 130 6e-31
U40483-1|AAA99775.1| 322|Caenorhabditis elegans NEX1 annexin pr... 97 1e-20
U00064-7|AAB52702.1| 322|Caenorhabditis elegans Annexin family ... 97 1e-20
Z32680-3|CAA83598.1| 317|Caenorhabditis elegans Hypothetical pr... 90 1e-18
U88315-15|AAB42365.1| 351|Caenorhabditis elegans Annexin family... 86 2e-17
U46668-4|AAA93348.3| 951|Caenorhabditis elegans Nematode astaci... 29 2.2
Z72503-1|CAA96596.2| 617|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z81080-3|CAD30439.1| 608|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z81461-4|CAB62798.1| 256|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z69793-6|CAI46593.1| 424|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z69793-5|CAA93673.2| 441|Caenorhabditis elegans Hypothetical pr... 28 6.6
>Z29443-8|CAE45742.1| 455|Caenorhabditis elegans Hypothetical
protein T07C4.9b protein.
Length = 455
Score = 130 bits (315), Expect = 6e-31
Identities = 64/131 (48%), Positives = 86/131 (65%)
Frame = +2
Query: 242 PTVVGVPNFNAVEDAAALRAAMKGFGTDEQAIIDILTTRSNMQRQAISQAFTREYGRDLI 421
P+V V FN+ DA LR AMKG G + +I IL R+N QRQ IS+AF YG+DLI
Sbjct: 141 PSVFPVQGFNSNADAEVLRKAMKGLGCNNSKVISILCQRTNWQRQEISKAFKVMYGKDLI 200
Query: 422 EDLKSELGGHFEDVIVALMTPPEEYLCQELHRCMEGMGTDEDTLVEILCTRTKPEIAAIV 601
++LK EL G FED+I+ALM P Y ++LHR MEG+GT E L+EI+ +RT +I +
Sbjct: 201 KELKGELHGDFEDLILALMDAPAIYDAKQLHRAMEGLGTKESVLIEIMTSRTNAQIQQVR 260
Query: 602 DTYERLYDRPL 634
D Y+ L+ + L
Sbjct: 261 DAYKMLFKKDL 271
Score = 64.9 bits (151), Expect = 5e-11
Identities = 38/127 (29%), Positives = 66/127 (51%), Gaps = 12/127 (9%)
Frame = +2
Query: 272 AVEDAAALRAAMKGFGTDEQAIIDILTTRSNMQRQAISQAFTREYGRDLIEDLKSELGGH 451
A+ DA L AM+G GT E +I+I+T+R+N Q Q + A+ + +DL DL E GH
Sbjct: 223 AIYDAKQLHRAMEGLGTKESVLIEIMTSRTNAQIQQVRDAYKMLFKKDLERDLIGETSGH 282
Query: 452 FEDVIVALMTPPEEYLC--------QELHRCMEG----MGTDEDTLVEILCTRTKPEIAA 595
F+ ++V+L + Q+ R ++ +GTDE T IL ++ ++
Sbjct: 283 FKRLLVSLCAGGRDESSQTDGLRANQDARRLLQAGEKRLGTDESTFNAILASQNFSQLRL 342
Query: 596 IVDTYER 616
+ + Y++
Sbjct: 343 VFEEYQK 349
Score = 51.2 bits (117), Expect = 6e-07
Identities = 30/121 (24%), Positives = 61/121 (50%), Gaps = 3/121 (2%)
Frame = +2
Query: 293 LRAAMKGFGTDEQAIIDILTTRSNMQRQAISQAFTREYGRDLIEDLKSELGGHFED---V 463
L+A K GTDE IL +++ Q + + + + + + + ++ E G D
Sbjct: 314 LQAGEKRLGTDESTFNAILASQNFSQLRLVFEEYQKASNHSIEKAIEFEFSGDIRDGLLA 373
Query: 464 IVALMTPPEEYLCQELHRCMEGMGTDEDTLVEILCTRTKPEIAAIVDTYERLYDRPLAEH 643
++A++ Y + LH M+G+GT ++ L+ + TR + ++ I + ++ LY R E+
Sbjct: 374 VIAVIRNRPAYFAKLLHDSMKGLGTRDNDLIRLCVTRAEYDMGDIRNMFQSLY-RTSLEN 432
Query: 644 M 646
M
Sbjct: 433 M 433
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = +2
Query: 509 LHRCMEGMGTDEDTLVEILCTRTKPEIAAIVDTYERLYDRPLAEHM 646
L + M+G+G + ++ ILC RT + I ++ +Y + L + +
Sbjct: 158 LRKAMKGLGCNNSKVISILCQRTNWQRQEISKAFKVMYGKDLIKEL 203
>Z29443-7|CAA82571.2| 497|Caenorhabditis elegans Hypothetical
protein T07C4.9a protein.
Length = 497
Score = 130 bits (315), Expect = 6e-31
Identities = 64/131 (48%), Positives = 86/131 (65%)
Frame = +2
Query: 242 PTVVGVPNFNAVEDAAALRAAMKGFGTDEQAIIDILTTRSNMQRQAISQAFTREYGRDLI 421
P+V V FN+ DA LR AMKG G + +I IL R+N QRQ IS+AF YG+DLI
Sbjct: 183 PSVFPVQGFNSNADAEVLRKAMKGLGCNNSKVISILCQRTNWQRQEISKAFKVMYGKDLI 242
Query: 422 EDLKSELGGHFEDVIVALMTPPEEYLCQELHRCMEGMGTDEDTLVEILCTRTKPEIAAIV 601
++LK EL G FED+I+ALM P Y ++LHR MEG+GT E L+EI+ +RT +I +
Sbjct: 243 KELKGELHGDFEDLILALMDAPAIYDAKQLHRAMEGLGTKESVLIEIMTSRTNAQIQQVR 302
Query: 602 DTYERLYDRPL 634
D Y+ L+ + L
Sbjct: 303 DAYKMLFKKDL 313
Score = 64.9 bits (151), Expect = 5e-11
Identities = 38/127 (29%), Positives = 66/127 (51%), Gaps = 12/127 (9%)
Frame = +2
Query: 272 AVEDAAALRAAMKGFGTDEQAIIDILTTRSNMQRQAISQAFTREYGRDLIEDLKSELGGH 451
A+ DA L AM+G GT E +I+I+T+R+N Q Q + A+ + +DL DL E GH
Sbjct: 265 AIYDAKQLHRAMEGLGTKESVLIEIMTSRTNAQIQQVRDAYKMLFKKDLERDLIGETSGH 324
Query: 452 FEDVIVALMTPPEEYLC--------QELHRCMEG----MGTDEDTLVEILCTRTKPEIAA 595
F+ ++V+L + Q+ R ++ +GTDE T IL ++ ++
Sbjct: 325 FKRLLVSLCAGGRDESSQTDGLRANQDARRLLQAGEKRLGTDESTFNAILASQNFSQLRL 384
Query: 596 IVDTYER 616
+ + Y++
Sbjct: 385 VFEEYQK 391
Score = 51.2 bits (117), Expect = 6e-07
Identities = 30/121 (24%), Positives = 61/121 (50%), Gaps = 3/121 (2%)
Frame = +2
Query: 293 LRAAMKGFGTDEQAIIDILTTRSNMQRQAISQAFTREYGRDLIEDLKSELGGHFED---V 463
L+A K GTDE IL +++ Q + + + + + + + ++ E G D
Sbjct: 356 LQAGEKRLGTDESTFNAILASQNFSQLRLVFEEYQKASNHSIEKAIEFEFSGDIRDGLLA 415
Query: 464 IVALMTPPEEYLCQELHRCMEGMGTDEDTLVEILCTRTKPEIAAIVDTYERLYDRPLAEH 643
++A++ Y + LH M+G+GT ++ L+ + TR + ++ I + ++ LY R E+
Sbjct: 416 VIAVIRNRPAYFAKLLHDSMKGLGTRDNDLIRLCVTRAEYDMGDIRNMFQSLY-RTSLEN 474
Query: 644 M 646
M
Sbjct: 475 M 475
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = +2
Query: 509 LHRCMEGMGTDEDTLVEILCTRTKPEIAAIVDTYERLYDRPLAEHM 646
L + M+G+G + ++ ILC RT + I ++ +Y + L + +
Sbjct: 200 LRKAMKGLGCNNSKVISILCQRTNWQRQEISKAFKVMYGKDLIKEL 245
>U40483-1|AAA99775.1| 322|Caenorhabditis elegans NEX1 annexin
protein.
Length = 322
Score = 96.7 bits (230), Expect = 1e-20
Identities = 48/130 (36%), Positives = 79/130 (60%)
Frame = +2
Query: 245 TVVGVPNFNAVEDAAALRAAMKGFGTDEQAIIDILTTRSNMQRQAISQAFTREYGRDLIE 424
T+V FNA A + A++ ++ A+++++T+ SN QRQ + + + +YG+D+I+
Sbjct: 7 TIVDAREFNAPMFAEKIDRALRA--GEKDAVVNVITSISNAQRQQLREPYKLKYGKDIIQ 64
Query: 425 DLKSELGGHFEDVIVALMTPPEEYLCQELHRCMEGMGTDEDTLVEILCTRTKPEIAAIVD 604
L + G E I ALM P +Y ++L M+G+GTDE L+EILC+RT ++ AI
Sbjct: 65 ALDKKFSGDLEKAIFALMETPLDYDVKQLKAAMKGLGTDEAVLIEILCSRTVDQLRAIRV 124
Query: 605 TYERLYDRPL 634
TYE+ Y + L
Sbjct: 125 TYEKEYGKAL 134
Score = 62.9 bits (146), Expect = 2e-10
Identities = 29/67 (43%), Positives = 44/67 (65%)
Frame = +2
Query: 281 DAAALRAAMKGFGTDEQAIIDILTTRSNMQRQAISQAFTREYGRDLIEDLKSELGGHFED 460
D L+AAMKG GTDE +I+IL +R+ Q +AI + +EYG+ L D+ + G F D
Sbjct: 89 DVKQLKAAMKGLGTDEAVLIEILCSRTVDQLRAIRVTYEKEYGKALEADIAGDTSGEFRD 148
Query: 461 VIVALMT 481
++V+L+T
Sbjct: 149 LLVSLVT 155
Score = 52.8 bits (121), Expect = 2e-07
Identities = 26/109 (23%), Positives = 56/109 (51%), Gaps = 3/109 (2%)
Frame = +2
Query: 323 DEQAIIDILTTRSNMQRQAISQAFTREYGRDLIEDLKSELGGHFED---VIVALMTPPEE 493
D + IL T++ Q + + F G + + ++ E G + IV + ++
Sbjct: 188 DGTHFLHILATQNQYQLRKVFAYFQELAGGSIEKSIEKEFSGDLQKSYLTIVRAASDKQK 247
Query: 494 YLCQELHRCMEGMGTDEDTLVEILCTRTKPEIAAIVDTYERLYDRPLAE 640
+ Q+LH M+G+GT ++ L+ ++ TR++ ++ I ++ LY + LA+
Sbjct: 248 FFAQQLHASMKGLGTRDNDLIRVIVTRSEVDLELIKAEFQELYSKSLAD 296
Score = 45.6 bits (103), Expect = 3e-05
Identities = 19/65 (29%), Positives = 36/65 (55%)
Frame = +2
Query: 284 AAALRAAMKGFGTDEQAIIDILTTRSNMQRQAISQAFTREYGRDLIEDLKSELGGHFEDV 463
A L A+MKG GT + +I ++ TRS + + I F Y + L + +K + G + D
Sbjct: 250 AQQLHASMKGLGTRDNDLIRVIVTRSEVDLELIKAEFQELYSKSLADTVKGDTSGAYRDA 309
Query: 464 IVALM 478
+++++
Sbjct: 310 LLSII 314
>U00064-7|AAB52702.1| 322|Caenorhabditis elegans Annexin family
protein 1 protein.
Length = 322
Score = 96.7 bits (230), Expect = 1e-20
Identities = 48/130 (36%), Positives = 79/130 (60%)
Frame = +2
Query: 245 TVVGVPNFNAVEDAAALRAAMKGFGTDEQAIIDILTTRSNMQRQAISQAFTREYGRDLIE 424
T+V FNA A + A++ ++ A+++++T+ SN QRQ + + + +YG+D+I+
Sbjct: 7 TIVDAREFNAPMFAEKIDRALRA--GEKDAVVNVITSISNAQRQQLREPYKLKYGKDIIQ 64
Query: 425 DLKSELGGHFEDVIVALMTPPEEYLCQELHRCMEGMGTDEDTLVEILCTRTKPEIAAIVD 604
L + G E I ALM P +Y ++L M+G+GTDE L+EILC+RT ++ AI
Sbjct: 65 ALDKKFSGDLEKAIFALMETPLDYDVKQLKAAMKGLGTDEAVLIEILCSRTVDQLRAIRV 124
Query: 605 TYERLYDRPL 634
TYE+ Y + L
Sbjct: 125 TYEKEYGKAL 134
Score = 62.9 bits (146), Expect = 2e-10
Identities = 29/67 (43%), Positives = 44/67 (65%)
Frame = +2
Query: 281 DAAALRAAMKGFGTDEQAIIDILTTRSNMQRQAISQAFTREYGRDLIEDLKSELGGHFED 460
D L+AAMKG GTDE +I+IL +R+ Q +AI + +EYG+ L D+ + G F D
Sbjct: 89 DVKQLKAAMKGLGTDEAVLIEILCSRTVDQLRAIRVTYEKEYGKALEADIAGDTSGEFRD 148
Query: 461 VIVALMT 481
++V+L+T
Sbjct: 149 LLVSLVT 155
Score = 52.8 bits (121), Expect = 2e-07
Identities = 26/109 (23%), Positives = 56/109 (51%), Gaps = 3/109 (2%)
Frame = +2
Query: 323 DEQAIIDILTTRSNMQRQAISQAFTREYGRDLIEDLKSELGGHFED---VIVALMTPPEE 493
D + IL T++ Q + + F G + + ++ E G + IV + ++
Sbjct: 188 DGTHFLHILATQNQYQLRKVFAYFQELAGGSIEKSIEKEFSGDLQKSYLTIVRAASDKQK 247
Query: 494 YLCQELHRCMEGMGTDEDTLVEILCTRTKPEIAAIVDTYERLYDRPLAE 640
+ Q+LH M+G+GT ++ L+ ++ TR++ ++ I ++ LY + LA+
Sbjct: 248 FFAQQLHASMKGLGTRDNDLIRVIVTRSEVDLELIKAEFQELYSKSLAD 296
Score = 45.6 bits (103), Expect = 3e-05
Identities = 19/65 (29%), Positives = 36/65 (55%)
Frame = +2
Query: 284 AAALRAAMKGFGTDEQAIIDILTTRSNMQRQAISQAFTREYGRDLIEDLKSELGGHFEDV 463
A L A+MKG GT + +I ++ TRS + + I F Y + L + +K + G + D
Sbjct: 250 AQQLHASMKGLGTRDNDLIRVIVTRSEVDLELIKAEFQELYSKSLADTVKGDTSGAYRDA 309
Query: 464 IVALM 478
+++++
Sbjct: 310 LLSII 314
>Z32680-3|CAA83598.1| 317|Caenorhabditis elegans Hypothetical
protein C28A5.3 protein.
Length = 317
Score = 90.2 bits (214), Expect = 1e-18
Identities = 47/127 (37%), Positives = 74/127 (58%)
Frame = +2
Query: 260 PNFNAVEDAAALRAAMKGFGTDEQAIIDILTTRSNMQRQAISQAFTREYGRDLIEDLKSE 439
P F+ V + L A++ ++ I++IL + +N QRQ I + YG+DL +++K
Sbjct: 10 PYFDEVAASEQLEKALRN--KEKLKILEILVSVNNTQRQMIRTPYKTRYGKDLEDEIKKA 67
Query: 440 LGGHFEDVIVALMTPPEEYLCQELHRCMEGMGTDEDTLVEILCTRTKPEIAAIVDTYERL 619
G FED +VAL+ P + EL+R ++G+GT+E L+EIL TRT EI A +TY
Sbjct: 68 FSGDFEDFLVALLQTPTKLDVTELNRSVKGLGTNEKNLIEILTTRTNEEIEAAKNTYFMT 127
Query: 620 YDRPLAE 640
Y + L +
Sbjct: 128 YSKSLED 134
Score = 53.2 bits (122), Expect = 2e-07
Identities = 28/122 (22%), Positives = 61/122 (50%), Gaps = 3/122 (2%)
Frame = +2
Query: 284 AAALRAAMKGFGTDEQAIIDILTTRSNMQRQAISQAFTREYGRDLIEDLKSELGGHFEDV 463
A L++ K G ++ I T + Q + + R+ G++ + + EL G F+++
Sbjct: 172 AQILKSFDKKSGVEKFDAFKIFATCNGAHIQKVIEEVERQSGKEFQKLIDKELSGDFKNL 231
Query: 464 IVALMTPPEE---YLCQELHRCMEGMGTDEDTLVEILCTRTKPEIAAIVDTYERLYDRPL 634
+++L+ Y +H +GMGT + L+ IL +R++ ++ I ++ L+ +PL
Sbjct: 232 VLSLIETSRNKPRYFANSIHLATKGMGTRDKDLIRILVSRSENDLVIIEHEFQTLFGKPL 291
Query: 635 AE 640
+
Sbjct: 292 TQ 293
Score = 48.8 bits (111), Expect = 3e-06
Identities = 20/71 (28%), Positives = 40/71 (56%)
Frame = +2
Query: 281 DAAALRAAMKGFGTDEQAIIDILTTRSNMQRQAISQAFTREYGRDLIEDLKSELGGHFED 460
D L ++KG GT+E+ +I+ILTTR+N + +A + Y + L + + ++ G F
Sbjct: 87 DVTELNRSVKGLGTNEKNLIEILTTRTNEEIEAAKNTYFMTYSKSLEDAISADTSGDFRR 146
Query: 461 VIVALMTPPEE 493
+++ ++ E
Sbjct: 147 LLIVILQAKRE 157
>U88315-15|AAB42365.1| 351|Caenorhabditis elegans Annexin family
protein 4 protein.
Length = 351
Score = 85.8 bits (203), Expect = 2e-17
Identities = 43/125 (34%), Positives = 70/125 (56%)
Frame = +2
Query: 260 PNFNAVEDAAALRAAMKGFGTDEQAIIDILTTRSNMQRQAISQAFTREYGRDLIEDLKSE 439
P+F+ V+ + LR+++ G T +Q II+ + +N QRQ I A+ Y R L+EDL+ E
Sbjct: 23 PDFHPVQASETLRSSLHGLETKDQTIINTVLYHNNFQRQKILGAYEDMYSRKLLEDLEEE 82
Query: 440 LGGHFEDVIVALMTPPEEYLCQELHRCMEGMGTDEDTLVEILCTRTKPEIAAIVDTYERL 619
GG F ++ AL P Y Q +++ + D +EI CTR+ ++ A+ DTY+
Sbjct: 83 CGGFFFEMCQALFKPAPNYDAQCVYKSLSNRHGDRSVAIEIACTRSPRQMRALRDTYQID 142
Query: 620 YDRPL 634
Y + L
Sbjct: 143 YRKSL 147
Score = 35.5 bits (78), Expect = 0.033
Identities = 15/52 (28%), Positives = 27/52 (51%)
Frame = +2
Query: 494 YLCQELHRCMEGMGTDEDTLVEILCTRTKPEIAAIVDTYERLYDRPLAEHMC 649
Y ++L M D+ T++ I +R++ ++ I Y+R Y RPL +C
Sbjct: 266 YFAEKLRTAMTAERVDQSTIIRICVSRSEIDLQDISLEYKRKYQRPLEHDIC 317
>U46668-4|AAA93348.3| 951|Caenorhabditis elegans Nematode astacin
protease protein39 protein.
Length = 951
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/60 (30%), Positives = 29/60 (48%)
Frame = -3
Query: 612 SYVSTIAAISGLVLVQRISTRVSSSVPIPSMQRCSSWHRYSSGGVIRATITSSK*PPNSD 433
S TIA+ +L+Q S+ ++S+P + Y++ GVI + PPNSD
Sbjct: 348 SLFRTIASSGNRMLIQVRSSTPAASLPFATYYAICGGPIYANEGVIHSPKYPESYPPNSD 407
>Z72503-1|CAA96596.2| 617|Caenorhabditis elegans Hypothetical
protein C26C6.3 protein.
Length = 617
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/69 (26%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Frame = +2
Query: 245 TVVGVPNFNAVEDAAALRAA--MKGFGTDEQAIIDILTTRSNMQRQAISQAFT-REYGRD 415
+++ + + +D A L A+ + F +E+ + + M++ A S++F RE+G D
Sbjct: 12 SLISISICSKADDPALLVASEFKEHFNVEEKQLETVEELLIKMKKLAHSRSFKGREFGHD 71
Query: 416 LIEDLKSEL 442
+ED K E+
Sbjct: 72 AVEDSKKEV 80
>Z81080-3|CAD30439.1| 608|Caenorhabditis elegans Hypothetical
protein F39H2.5 protein.
Length = 608
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = -2
Query: 571 GAEDLNEGVFIRAHTLH-ATVQLLAQVLLRGSHQSHDY-IFEVTTQFRLQVF 422
G E LN G F+ +H A+V L +L G Q+++ I +V FR + F
Sbjct: 111 GIEKLNSGDFVALQNVHAASVGLTEMQVLHGGGQAYNRGISKVPVDFRNEAF 162
>Z81461-4|CAB62798.1| 256|Caenorhabditis elegans Hypothetical
protein C04F12.6 protein.
Length = 256
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = -1
Query: 533 PYPPCNGAAPGTGTPQGESSEPRLHLRSDHPIQT-SGLQ*DLF 408
P P GAAP G P + +P + D QT +GL ++F
Sbjct: 71 PTAPAEGAAPAAGAPAAVAPKPPMAATHDPNYQTLAGLDNNVF 113
>Z69793-6|CAI46593.1| 424|Caenorhabditis elegans Hypothetical
protein R03A10.4b protein.
Length = 424
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = +2
Query: 335 IIDILTTRSNMQRQAISQAFTREYGRDLIEDLKSELGGHFEDVIV 469
+ D+L S + +TR YG ++ D+ +++ HF +V V
Sbjct: 49 VTDLLENLSKHPELTAAHQYTRGYGHPMLVDILAKMYSHFYNVQV 93
>Z69793-5|CAA93673.2| 441|Caenorhabditis elegans Hypothetical
protein R03A10.4a protein.
Length = 441
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = +2
Query: 335 IIDILTTRSNMQRQAISQAFTREYGRDLIEDLKSELGGHFEDVIV 469
+ D+L S + +TR YG ++ D+ +++ HF +V V
Sbjct: 66 VTDLLENLSKHPELTAAHQYTRGYGHPMLVDILAKMYSHFYNVQV 110
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,479,648
Number of Sequences: 27780
Number of extensions: 340012
Number of successful extensions: 998
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 923
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 997
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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