Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0859
         (750 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein...    27   0.62 
AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled ...    27   0.82 
AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    25   3.3  
M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    24   4.4  
AY062201-1|AAL58562.1|  151|Anopheles gambiae cytochrome P450 CY...    24   5.8  
Y17704-1|CAA76824.2|  401|Anopheles gambiae hypothetical protein...    23   7.6  

>AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 612

 Score = 27.1 bits (57), Expect = 0.62
 Identities = 23/88 (26%), Positives = 35/88 (39%), Gaps = 2/88 (2%)
 Frame = +1

Query: 58  HQRSQLHXA*SVQPPVGVAXTFIVQGFGNVGLHTCRYLVRAG-ATCIG-VIEHDGSIYNP 231
           HQ+ Q H       P     T   +   N+ LH   + + +G  T +G ++   G+   P
Sbjct: 82  HQQVQ-HQPQPPSTPFANVSTGQNESLANLLLHPGVHQLSSGLVTLVGDIMAQSGATILP 140

Query: 232 DGINPKALEDYRIENGTVVGFPGAKAYE 315
                +    Y  ENGT +  PG   YE
Sbjct: 141 REECDRLNISYAFENGTALEIPGLSCYE 168


>AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 611

 Score = 26.6 bits (56), Expect = 0.82
 Identities = 23/88 (26%), Positives = 34/88 (38%), Gaps = 2/88 (2%)
 Frame = +1

Query: 58  HQRSQLHXA*SVQPPVGVAXTFIVQGFGNVGLHTCRYLVRAG-ATCIG-VIEHDGSIYNP 231
           HQ+ Q H       P     T   +   N+ LH   + + +G  T +G ++   G    P
Sbjct: 81  HQQVQ-HQPQPPSTPFANVSTGQNESLANLLLHPGVHQLSSGLVTLVGDIMAQSGDTILP 139

Query: 232 DGINPKALEDYRIENGTVVGFPGAKAYE 315
                +    Y  ENGT +  PG   YE
Sbjct: 140 REECDRLNISYAFENGTALEIPGLSCYE 167


>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
           protein.
          Length = 541

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 14/41 (34%), Positives = 14/41 (34%)
 Frame = +3

Query: 351 CTRRHRTGHKQGQRSQDPS*DHCGGRQRSHHTCCRQDPHRS 473
           C R    GHK    S       CGG  R  H  C     RS
Sbjct: 500 CIRCGSEGHKARDCSSYVKCAACGGPHRIGHMSCEHPASRS 540


>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 12/40 (30%), Positives = 15/40 (37%)
 Frame = +3

Query: 351 CTRRHRTGHKQGQRSQDPS*DHCGGRQRSHHTCCRQDPHR 470
           C R   TGHK      +     CGG     H+ C +   R
Sbjct: 531 CIRCGLTGHKARSCQNEAKCALCGGAHHIGHSECARSAQR 570


>AY062201-1|AAL58562.1|  151|Anopheles gambiae cytochrome P450
           CYP4D22 protein.
          Length = 151

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +1

Query: 397 RIQAKIIAEAANGPTTPAADKILIDRNIL 483
           R+  +++A   N P TPA  + L D   L
Sbjct: 33  RVYREVVAIVGNDPATPATHRNLQDMKYL 61


>Y17704-1|CAA76824.2|  401|Anopheles gambiae hypothetical protein
           protein.
          Length = 401

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 12/36 (33%), Positives = 15/36 (41%)
 Frame = -1

Query: 189 SGAGADEVAASVESHVTETLDDERXCHPNRGLYRSC 82
           S AGA   A  +  H  +  D E    P   LY+ C
Sbjct: 32  SHAGAILTAPLIHCHPLKACDGEAILKPYLALYQQC 67


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 705,470
Number of Sequences: 2352
Number of extensions: 14892
Number of successful extensions: 37
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)