Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0857
(700 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68008-6|CAA92001.1| 362|Caenorhabditis elegans Hypothetical pr... 55 4e-08
AF272397-1|AAF76229.1| 237|Caenorhabditis elegans CEH-17 protein. 53 2e-07
AF003151-5|AAK18908.1| 237|Caenorhabditis elegans C.elegans hom... 53 2e-07
Z47072-1|CAA87368.1| 252|Caenorhabditis elegans Hypothetical pr... 52 5e-07
X64904-1|CAA46108.1| 184|Caenorhabditis elegans unc-4 protein. 52 5e-07
Z70780-17|CAA94830.3| 264|Caenorhabditis elegans Hypothetical p... 49 3e-06
Z70754-11|CAA94780.3| 264|Caenorhabditis elegans Hypothetical p... 49 3e-06
Z49937-5|CAC42288.1| 296|Caenorhabditis elegans Hypothetical pr... 48 9e-06
Z49937-4|CAC42287.1| 269|Caenorhabditis elegans Hypothetical pr... 48 9e-06
Z49937-3|CAA90186.2| 455|Caenorhabditis elegans Hypothetical pr... 48 9e-06
U31537-2|AAA82992.1| 261|Caenorhabditis elegans male abnormal-1... 48 9e-06
U31537-1|AAA82991.1| 455|Caenorhabditis elegans variable abnorm... 48 9e-06
U29184-1|AAC47542.1| 296|Caenorhabditis elegans MAB-18 protein. 48 9e-06
U29145-1|AAC47541.1| 284|Caenorhabditis elegans MAB-18 protein. 48 9e-06
Z81143-3|CAB03519.2| 276|Caenorhabditis elegans Hypothetical pr... 46 2e-05
AL132858-4|CAB60479.2| 338|Caenorhabditis elegans Hypothetical ... 46 2e-05
AL132858-3|CAB60478.2| 391|Caenorhabditis elegans Hypothetical ... 46 2e-05
AF381629-1|AAL12002.1| 223|Caenorhabditis elegans homeodomain p... 46 2e-05
AF381628-1|AAL12001.1| 372|Caenorhabditis elegans homeodomain p... 46 2e-05
AF381627-1|AAL12000.1| 332|Caenorhabditis elegans homeodomain p... 46 2e-05
Z81046-4|CAB02825.1| 278|Caenorhabditis elegans Hypothetical pr... 45 6e-05
Z73422-5|CAE54882.1| 323|Caenorhabditis elegans Hypothetical pr... 42 3e-04
Z73422-4|CAA97770.1| 319|Caenorhabditis elegans Hypothetical pr... 42 3e-04
L37867-1|AAA63155.1| 319|Caenorhabditis elegans homeodomain pro... 42 3e-04
AC006835-2|AAF40014.1| 229|Caenorhabditis elegans Hypothetical ... 42 4e-04
X52812-1|CAB57216.1| 66|Caenorhabditis elegans protein ( Caeno... 42 6e-04
U50184-2|AAB93323.1| 344|Caenorhabditis elegans C.elegans homeo... 42 6e-04
U19995-1|AAA93063.1| 344|Caenorhabditis elegans ceh-10 protein. 42 6e-04
Z81046-3|CAB02821.1| 257|Caenorhabditis elegans Hypothetical pr... 40 0.002
U39648-4|AAK39290.1| 220|Caenorhabditis elegans Hypothetical pr... 37 0.012
AF038608-13|AAC25819.1| 253|Caenorhabditis elegans Hypothetical... 34 0.085
Z95623-1|CAB09133.1| 314|Caenorhabditis elegans Hypothetical pr... 29 3.2
U00049-2|AAC47052.2| 327|Caenorhabditis elegans Serpentine rece... 27 9.8
>Z68008-6|CAA92001.1| 362|Caenorhabditis elegans Hypothetical
protein R08B4.2 protein.
Length = 362
Score = 55.2 bits (127), Expect = 4e-08
Identities = 24/35 (68%), Positives = 29/35 (82%)
Frame = +1
Query: 349 LSELESLFQKTHYPDVFLREEVALRISLSEARVQV 453
L ELE +F +THYPDVF REE+A R+ L+EARVQV
Sbjct: 129 LDELEKVFARTHYPDVFTREELATRVQLTEARVQV 163
>AF272397-1|AAF76229.1| 237|Caenorhabditis elegans CEH-17 protein.
Length = 237
Score = 53.2 bits (122), Expect = 2e-07
Identities = 23/35 (65%), Positives = 29/35 (82%)
Frame = +1
Query: 349 LSELESLFQKTHYPDVFLREEVALRISLSEARVQV 453
L ELE F +THYPD++ REE+A+RI L+EARVQV
Sbjct: 161 LKELERSFCETHYPDIYTREEIAMRIDLTEARVQV 195
>AF003151-5|AAK18908.1| 237|Caenorhabditis elegans C.elegans
homeobox protein 17 protein.
Length = 237
Score = 53.2 bits (122), Expect = 2e-07
Identities = 23/35 (65%), Positives = 29/35 (82%)
Frame = +1
Query: 349 LSELESLFQKTHYPDVFLREEVALRISLSEARVQV 453
L ELE F +THYPD++ REE+A+RI L+EARVQV
Sbjct: 161 LKELERSFCETHYPDIYTREEIAMRIDLTEARVQV 195
>Z47072-1|CAA87368.1| 252|Caenorhabditis elegans Hypothetical
protein F26C11.2 protein.
Length = 252
Score = 51.6 bits (118), Expect = 5e-07
Identities = 22/35 (62%), Positives = 29/35 (82%)
Frame = +1
Query: 349 LSELESLFQKTHYPDVFLREEVALRISLSEARVQV 453
L ELES F+ +HYPDVF+RE +A+R+ L E+RVQV
Sbjct: 100 LEELESAFEASHYPDVFMREALAMRLDLLESRVQV 134
>X64904-1|CAA46108.1| 184|Caenorhabditis elegans unc-4 protein.
Length = 184
Score = 51.6 bits (118), Expect = 5e-07
Identities = 22/35 (62%), Positives = 29/35 (82%)
Frame = +1
Query: 349 LSELESLFQKTHYPDVFLREEVALRISLSEARVQV 453
L ELES F+ +HYPDVF+RE +A+R+ L E+RVQV
Sbjct: 64 LEELESAFEASHYPDVFMREALAMRLDLLESRVQV 98
>Z70780-17|CAA94830.3| 264|Caenorhabditis elegans Hypothetical
protein F58E6.10 protein.
Length = 264
Score = 49.2 bits (112), Expect = 3e-06
Identities = 20/35 (57%), Positives = 29/35 (82%)
Frame = +1
Query: 349 LSELESLFQKTHYPDVFLREEVALRISLSEARVQV 453
L EL++ FQK+HYPD+++REE+A L+EAR+QV
Sbjct: 97 LQELDAAFQKSHYPDIYVREELARITKLNEARIQV 131
>Z70754-11|CAA94780.3| 264|Caenorhabditis elegans Hypothetical
protein F58E6.10 protein.
Length = 264
Score = 49.2 bits (112), Expect = 3e-06
Identities = 20/35 (57%), Positives = 29/35 (82%)
Frame = +1
Query: 349 LSELESLFQKTHYPDVFLREEVALRISLSEARVQV 453
L EL++ FQK+HYPD+++REE+A L+EAR+QV
Sbjct: 97 LQELDAAFQKSHYPDIYVREELARITKLNEARIQV 131
>Z49937-5|CAC42288.1| 296|Caenorhabditis elegans Hypothetical
protein F14F3.1c protein.
Length = 296
Score = 47.6 bits (108), Expect = 9e-06
Identities = 20/35 (57%), Positives = 26/35 (74%)
Frame = +1
Query: 349 LSELESLFQKTHYPDVFLREEVALRISLSEARVQV 453
+ LE F++THYPDVF RE +A +I L EAR+QV
Sbjct: 70 IESLEKEFERTHYPDVFARERLAQKIQLPEARIQV 104
>Z49937-4|CAC42287.1| 269|Caenorhabditis elegans Hypothetical
protein F14F3.1b protein.
Length = 269
Score = 47.6 bits (108), Expect = 9e-06
Identities = 20/35 (57%), Positives = 26/35 (74%)
Frame = +1
Query: 349 LSELESLFQKTHYPDVFLREEVALRISLSEARVQV 453
+ LE F++THYPDVF RE +A +I L EAR+QV
Sbjct: 43 IESLEKEFERTHYPDVFARERLAQKIQLPEARIQV 77
>Z49937-3|CAA90186.2| 455|Caenorhabditis elegans Hypothetical
protein F14F3.1a protein.
Length = 455
Score = 47.6 bits (108), Expect = 9e-06
Identities = 20/35 (57%), Positives = 26/35 (74%)
Frame = +1
Query: 349 LSELESLFQKTHYPDVFLREEVALRISLSEARVQV 453
+ LE F++THYPDVF RE +A +I L EAR+QV
Sbjct: 229 IESLEKEFERTHYPDVFARERLAQKIQLPEARIQV 263
>U31537-2|AAA82992.1| 261|Caenorhabditis elegans male abnormal-18
protein.
Length = 261
Score = 47.6 bits (108), Expect = 9e-06
Identities = 20/35 (57%), Positives = 26/35 (74%)
Frame = +1
Query: 349 LSELESLFQKTHYPDVFLREEVALRISLSEARVQV 453
+ LE F++THYPDVF RE +A +I L EAR+QV
Sbjct: 35 IESLEKEFERTHYPDVFARERLAQKIQLPEARIQV 69
>U31537-1|AAA82991.1| 455|Caenorhabditis elegans variable
abnormal-3 protein.
Length = 455
Score = 47.6 bits (108), Expect = 9e-06
Identities = 20/35 (57%), Positives = 26/35 (74%)
Frame = +1
Query: 349 LSELESLFQKTHYPDVFLREEVALRISLSEARVQV 453
+ LE F++THYPDVF RE +A +I L EAR+QV
Sbjct: 229 IESLEKEFERTHYPDVFARERLAQKIQLPEARIQV 263
>U29184-1|AAC47542.1| 296|Caenorhabditis elegans MAB-18 protein.
Length = 296
Score = 47.6 bits (108), Expect = 9e-06
Identities = 20/35 (57%), Positives = 26/35 (74%)
Frame = +1
Query: 349 LSELESLFQKTHYPDVFLREEVALRISLSEARVQV 453
+ LE F++THYPDVF RE +A +I L EAR+QV
Sbjct: 70 IESLEKEFERTHYPDVFARERLAQKIQLPEARIQV 104
>U29145-1|AAC47541.1| 284|Caenorhabditis elegans MAB-18 protein.
Length = 284
Score = 47.6 bits (108), Expect = 9e-06
Identities = 20/35 (57%), Positives = 26/35 (74%)
Frame = +1
Query: 349 LSELESLFQKTHYPDVFLREEVALRISLSEARVQV 453
+ LE F++THYPDVF RE +A +I L EAR+QV
Sbjct: 58 IESLEKEFERTHYPDVFARERLAQKIQLPEARIQV 92
>Z81143-3|CAB03519.2| 276|Caenorhabditis elegans Hypothetical
protein ZK265.4 protein.
Length = 276
Score = 46.4 bits (105), Expect = 2e-05
Identities = 20/35 (57%), Positives = 25/35 (71%)
Frame = +1
Query: 349 LSELESLFQKTHYPDVFLREEVALRISLSEARVQV 453
L LE+ F KTHYPDV+ RE +A ++ L E RVQV
Sbjct: 72 LHALEAAFDKTHYPDVYARETLAAKVQLPEVRVQV 106
>AL132858-4|CAB60479.2| 338|Caenorhabditis elegans Hypothetical
protein Y113G7A.6b protein.
Length = 338
Score = 46.4 bits (105), Expect = 2e-05
Identities = 21/35 (60%), Positives = 27/35 (77%)
Frame = +1
Query: 349 LSELESLFQKTHYPDVFLREEVALRISLSEARVQV 453
L LES F KT YPD+F+RE++A +I L E+RVQV
Sbjct: 158 LEILESYFVKTRYPDIFMREDMAHKIQLPESRVQV 192
>AL132858-3|CAB60478.2| 391|Caenorhabditis elegans Hypothetical
protein Y113G7A.6a protein.
Length = 391
Score = 46.4 bits (105), Expect = 2e-05
Identities = 21/35 (60%), Positives = 27/35 (77%)
Frame = +1
Query: 349 LSELESLFQKTHYPDVFLREEVALRISLSEARVQV 453
L LES F KT YPD+F+RE++A +I L E+RVQV
Sbjct: 211 LEILESYFVKTRYPDIFMREDMAHKIQLPESRVQV 245
>AF381629-1|AAL12002.1| 223|Caenorhabditis elegans homeodomain
protein TTX-1 protein.
Length = 223
Score = 46.4 bits (105), Expect = 2e-05
Identities = 21/35 (60%), Positives = 27/35 (77%)
Frame = +1
Query: 349 LSELESLFQKTHYPDVFLREEVALRISLSEARVQV 453
L LES F KT YPD+F+RE++A +I L E+RVQV
Sbjct: 174 LEILESYFVKTRYPDIFMREDMAHKIQLPESRVQV 208
>AF381628-1|AAL12001.1| 372|Caenorhabditis elegans homeodomain
protein TTX-1 protein.
Length = 372
Score = 46.4 bits (105), Expect = 2e-05
Identities = 21/35 (60%), Positives = 27/35 (77%)
Frame = +1
Query: 349 LSELESLFQKTHYPDVFLREEVALRISLSEARVQV 453
L LES F KT YPD+F+RE++A +I L E+RVQV
Sbjct: 192 LEILESYFVKTRYPDIFMREDMAHKIQLPESRVQV 226
>AF381627-1|AAL12000.1| 332|Caenorhabditis elegans homeodomain
protein TTX-1 protein.
Length = 332
Score = 46.4 bits (105), Expect = 2e-05
Identities = 21/35 (60%), Positives = 27/35 (77%)
Frame = +1
Query: 349 LSELESLFQKTHYPDVFLREEVALRISLSEARVQV 453
L LES F KT YPD+F+RE++A +I L E+RVQV
Sbjct: 152 LEILESYFVKTRYPDIFMREDMAHKIQLPESRVQV 186
>Z81046-4|CAB02825.1| 278|Caenorhabditis elegans Hypothetical
protein C37E2.5 protein.
Length = 278
Score = 44.8 bits (101), Expect = 6e-05
Identities = 21/35 (60%), Positives = 26/35 (74%)
Frame = +1
Query: 349 LSELESLFQKTHYPDVFLREEVALRISLSEARVQV 453
L LE+LF +T YPDVF RE VA +I L E+R+QV
Sbjct: 53 LEILETLFNETQYPDVFARERVADQIRLQESRIQV 87
>Z73422-5|CAE54882.1| 323|Caenorhabditis elegans Hypothetical
protein B0564.10b protein.
Length = 323
Score = 42.3 bits (95), Expect = 3e-04
Identities = 19/35 (54%), Positives = 27/35 (77%)
Frame = +1
Query: 349 LSELESLFQKTHYPDVFLREEVALRISLSEARVQV 453
L+ELE+ F + YPD+ REE+A+ ISL+E RV+V
Sbjct: 124 LTELENWFSRNRYPDMACREEIAVWISLTEPRVRV 158
>Z73422-4|CAA97770.1| 319|Caenorhabditis elegans Hypothetical
protein B0564.10a protein.
Length = 319
Score = 42.3 bits (95), Expect = 3e-04
Identities = 19/35 (54%), Positives = 27/35 (77%)
Frame = +1
Query: 349 LSELESLFQKTHYPDVFLREEVALRISLSEARVQV 453
L+ELE+ F + YPD+ REE+A+ ISL+E RV+V
Sbjct: 124 LTELENWFSRNRYPDMACREEIAVWISLTEPRVRV 158
>L37867-1|AAA63155.1| 319|Caenorhabditis elegans homeodomain
protein protein.
Length = 319
Score = 42.3 bits (95), Expect = 3e-04
Identities = 19/35 (54%), Positives = 27/35 (77%)
Frame = +1
Query: 349 LSELESLFQKTHYPDVFLREEVALRISLSEARVQV 453
L+ELE+ F + YPD+ REE+A+ ISL+E RV+V
Sbjct: 124 LTELENWFSRNRYPDMACREEIAVWISLTEPRVRV 158
>AC006835-2|AAF40014.1| 229|Caenorhabditis elegans Hypothetical
protein ZK993.1 protein.
Length = 229
Score = 41.9 bits (94), Expect = 4e-04
Identities = 19/35 (54%), Positives = 25/35 (71%)
Frame = +1
Query: 349 LSELESLFQKTHYPDVFLREEVALRISLSEARVQV 453
L+ LE+ F THYPD REE+A++ SL E RV+V
Sbjct: 121 LNILETTFSTTHYPDATTREELAVQCSLKEERVEV 155
>X52812-1|CAB57216.1| 66|Caenorhabditis elegans protein (
Caenorhabditis elegansceh-10 gene, unknown homeobox. ).
Length = 66
Score = 41.5 bits (93), Expect = 6e-04
Identities = 17/35 (48%), Positives = 24/35 (68%)
Frame = +1
Query: 349 LSELESLFQKTHYPDVFLREEVALRISLSEARVQV 453
+ ELE FQ +HYPD++ RE +A + L E R+QV
Sbjct: 19 IDELEKAFQDSHYPDIYAREVLAGKTELQEDRIQV 53
>U50184-2|AAB93323.1| 344|Caenorhabditis elegans C.elegans homeobox
protein 10 protein.
Length = 344
Score = 41.5 bits (93), Expect = 6e-04
Identities = 17/35 (48%), Positives = 24/35 (68%)
Frame = +1
Query: 349 LSELESLFQKTHYPDVFLREEVALRISLSEARVQV 453
+ ELE FQ +HYPD++ RE +A + L E R+QV
Sbjct: 148 IDELEKAFQDSHYPDIYAREVLAGKTELQEDRIQV 182
>U19995-1|AAA93063.1| 344|Caenorhabditis elegans ceh-10 protein.
Length = 344
Score = 41.5 bits (93), Expect = 6e-04
Identities = 17/35 (48%), Positives = 24/35 (68%)
Frame = +1
Query: 349 LSELESLFQKTHYPDVFLREEVALRISLSEARVQV 453
+ ELE FQ +HYPD++ RE +A + L E R+QV
Sbjct: 148 IDELEKAFQDSHYPDIYAREVLAGKTELQEDRIQV 182
>Z81046-3|CAB02821.1| 257|Caenorhabditis elegans Hypothetical
protein C37E2.4 protein.
Length = 257
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/35 (51%), Positives = 25/35 (71%)
Frame = +1
Query: 349 LSELESLFQKTHYPDVFLREEVALRISLSEARVQV 453
L +LE +F++T YPDV RE +A I+L + RVQV
Sbjct: 67 LDQLEKVFRETQYPDVHRREALAKAINLPDGRVQV 101
>U39648-4|AAK39290.1| 220|Caenorhabditis elegans Hypothetical
protein T13C5.4 protein.
Length = 220
Score = 37.1 bits (82), Expect = 0.012
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = +1
Query: 349 LSELESLFQKTHYPDVFLREEVALRISLSEARVQV 453
+ E+E +F + YPD RE++A +I L E RVQ+
Sbjct: 56 IDEMEKVFAENQYPDTMSREKLANKIQLHEERVQI 90
>AF038608-13|AAC25819.1| 253|Caenorhabditis elegans Hypothetical
protein C09G12.1 protein.
Length = 253
Score = 34.3 bits (75), Expect = 0.085
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = +1
Query: 349 LSELESLFQKTHYPDVFLREEVALRISLSEARVQV 453
L LE F K YPDV RE + + L+EAR+QV
Sbjct: 103 LELLEEAFLKCQYPDVQQRETLGKQTELAEARIQV 137
>Z95623-1|CAB09133.1| 314|Caenorhabditis elegans Hypothetical
protein Y53C12C.1 protein.
Length = 314
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +1
Query: 349 LSELESLFQKTHYPDVFLREEVALRISLSEARVQV 453
L LE +F + YP R ++ R +L EAR+QV
Sbjct: 215 LQSLEEVFLRDPYPSPNERADLVKRTNLPEARIQV 249
>U00049-2|AAC47052.2| 327|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 2 protein.
Length = 327
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +2
Query: 29 VPWI-SKSFKHFQYEYWMSFVLLYSILSLTRVIITKTLPKY 148
+PW S+ +K F +Y ++ V+L L + +II+K LP Y
Sbjct: 145 IPWKHSQVWKSFM-KYAIALVILTPFLFIWNIIISKKLPVY 184
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,340,516
Number of Sequences: 27780
Number of extensions: 262979
Number of successful extensions: 709
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 632
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 708
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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