Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0856
         (750 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578802-1|AAT07307.1|  108|Anopheles gambiae FK506-binding prot...    96   1e-21
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            29   0.20 
AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    26   1.1  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    26   1.4  
AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.     24   4.4  

>AY578802-1|AAT07307.1|  108|Anopheles gambiae FK506-binding protein
           protein.
          Length = 108

 Score = 95.9 bits (228), Expect = 1e-21
 Identities = 47/107 (43%), Positives = 64/107 (59%), Gaps = 1/107 (0%)
 Frame = +3

Query: 102 GVQIEDLKLGNGPV-AKPGKVVMVYYEGRLKQNNKMFDNCLKGPGFKFRLGAKEVISGWD 278
           GVQI  +  G+     KPG+  +V+Y G L        +  +G  FKF +G  EVI GWD
Sbjct: 2   GVQIVPIANGDQTTFPKPGQTAVVHYTGTLDDGTVFDSSRTRGKPFKFSVGKGEVIRGWD 61

Query: 279 VGVSGMKVGGKRKIICPPGMAYGAKGSPPVIPPNSTLVFEVELKNVK 419
            GV+ M VG + K++C P  AYG++G P VIPPN+ L F+VEL  V+
Sbjct: 62  EGVAQMSVGQRAKLVCSPDYAYGSRGHPGVIPPNARLTFDVELLRVE 108


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 28.7 bits (61), Expect = 0.20
 Identities = 19/51 (37%), Positives = 23/51 (45%)
 Frame = -3

Query: 370 ITGGEPFAPYAMPGGQIIFLLPPTFIPETPTSQPLMTSFAPRRNLNPGPLR 218
           +TGG    P   P G  +  +PP F+P      PL    AP   LNP  LR
Sbjct: 523 LTGGPLGPPPPPPPGGAVLNIPPQFLP-----PPLNLLRAPFFPLNPAQLR 568


>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 15/51 (29%), Positives = 22/51 (43%)
 Frame = -3

Query: 367 TGGEPFAPYAMPGGQIIFLLPPTFIPETPTSQPLMTSFAPRRNLNPGPLRQ 215
           TG  P  P++ P      L+    I  TP+S P +T       + P P +Q
Sbjct: 432 TGMSPSYPHSEPSPDYAMLIGSRVIQRTPSSSPPLTPNTICGLIAPPPQQQ 482


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
            precursor protein.
          Length = 1623

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = +3

Query: 105  VQIEDLKLGNGPVAKPGKVVMVYYEGRLKQNNKMFDN 215
            + +ED K G+G   K    ++   E RL++  K+ DN
Sbjct: 1086 ILVEDAKSGSGVGEKTLNEILRELEARLQEVQKLLDN 1122


>AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.
          Length = 189

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = -3

Query: 355 PFAPYAMPGGQIIFLLPPTFIPETPTSQPLMTSFA 251
           P+ P    GG+  +L PP   P T T+ P  TS A
Sbjct: 95  PWHPRPPFGGRPWWLRPPFHRPTTSTAAPEGTSVA 129


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 718,480
Number of Sequences: 2352
Number of extensions: 14836
Number of successful extensions: 27
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)