Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0852
(741 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0485 - 8808139-8808618 39 0.005
03_02_0484 + 8805053-8805538 39 0.005
03_02_0483 - 8804021-8804485 39 0.005
03_02_0478 + 8775892-8776377 37 0.015
02_02_0077 - 6586638-6587165 37 0.015
04_04_0017 + 22176759-22177406 36 0.026
01_01_0230 - 1946079-1946786,1946981-1947141,1948010-1948457 36 0.045
01_01_0229 - 1943473-1943922 35 0.059
01_01_0231 + 1951047-1951499 35 0.078
12_01_0061 + 514798-515967 34 0.14
11_02_0041 - 7669692-7670312 34 0.14
02_05_0494 + 29486960-29487454 33 0.18
01_01_0227 + 1933247-1933699 33 0.31
03_05_0865 - 28365430-28367640 31 0.73
01_01_0599 - 4448290-4448790 31 0.73
02_05_0308 - 27754340-27754634,27755591-27755696,27755781-277558... 30 1.7
01_05_0523 - 22915390-22915901,22916496-22916619,22916708-229168... 30 1.7
02_05_0444 - 29073740-29073844,29074417-29074725,29077910-290779... 30 2.2
12_02_0643 - 21461123-21461902 29 2.9
01_01_0228 + 1940149-1940649 29 5.1
11_01_0319 - 2396835-2396951,2397035-2397105,2397219-2397297,239... 28 6.8
07_03_0725 + 20991640-20992471,20993308-20993418,20993542-209937... 28 6.8
03_04_0159 + 17832666-17832938,17833634-17833873 28 6.8
03_02_0467 + 8707777-8707892,8708030-8708096,8708190-8708260,870... 28 6.8
01_06_0381 + 28878811-28879120,28880189-28880331,28880753-288815... 28 6.8
07_01_0628 - 4691991-4692806,4694291-4694293,4694527-4694637 28 9.0
01_01_0277 + 2274383-2274465,2274889-2274955,2275040-2275110,227... 28 9.0
>03_02_0485 - 8808139-8808618
Length = 159
Score = 38.7 bits (86), Expect = 0.005
Identities = 16/38 (42%), Positives = 27/38 (71%)
Frame = +1
Query: 379 SRQFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVP 492
S +F+RR+ LPE PE +++ + +GVLT+T P++ P
Sbjct: 111 SGKFLRRFRLPENTKPEQIKASM-ENGVLTVTVPKEEP 147
>03_02_0484 + 8805053-8805538
Length = 161
Score = 38.7 bits (86), Expect = 0.005
Identities = 16/38 (42%), Positives = 27/38 (71%)
Frame = +1
Query: 379 SRQFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVP 492
S +F+RR+ LPE PE +++ + +GVLT+T P++ P
Sbjct: 113 SGKFLRRFRLPENTKPEQIKASM-ENGVLTVTVPKEEP 149
>03_02_0483 - 8804021-8804485
Length = 154
Score = 38.7 bits (86), Expect = 0.005
Identities = 16/38 (42%), Positives = 27/38 (71%)
Frame = +1
Query: 379 SRQFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVP 492
S +F+RR+ LPE PE +++ + +GVLT+T P++ P
Sbjct: 106 SGKFLRRFRLPENTKPEQIKASM-ENGVLTVTVPKEEP 142
>03_02_0478 + 8775892-8776377
Length = 161
Score = 37.1 bits (82), Expect = 0.015
Identities = 15/36 (41%), Positives = 27/36 (75%)
Frame = +1
Query: 379 SRQFVRRYALPEGAAPETVESRLSSDGVLTITAPRK 486
S +F+RR+ LP+ A PE +++ + +GVLT+T P++
Sbjct: 113 SGKFLRRFRLPDNAKPEQIKASM-ENGVLTVTVPKE 147
>02_02_0077 - 6586638-6587165
Length = 175
Score = 37.1 bits (82), Expect = 0.015
Identities = 20/51 (39%), Positives = 28/51 (54%)
Frame = +1
Query: 385 QFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPIAQTG 537
+F+RR+ LPE A + V + DGVLT+T +K P K R V + G
Sbjct: 117 KFMRRFPLPESADLDGVRAEYK-DGVLTVTVDKKPPPEPKKPRVVEVKVAG 166
>04_04_0017 + 22176759-22177406
Length = 215
Score = 36.3 bits (80), Expect = 0.026
Identities = 19/51 (37%), Positives = 30/51 (58%)
Frame = +1
Query: 385 QFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPIAQTG 537
+F R+ LP+ A +++ + L + GVLT+ + PD +KG R V IA G
Sbjct: 141 RFWRQLRLPDNADLDSIAASLDN-GVLTVRFRKLAPDQIKGPRVVGIASAG 190
>01_01_0230 - 1946079-1946786,1946981-1947141,1948010-1948457
Length = 438
Score = 35.5 bits (78), Expect = 0.045
Identities = 17/35 (48%), Positives = 25/35 (71%)
Frame = +1
Query: 379 SRQFVRRYALPEGAAPETVESRLSSDGVLTITAPR 483
S QF+RR+ LPE A + V++ L +GVLT+T P+
Sbjct: 102 SGQFMRRFRLPENAKVDQVKAGL-ENGVLTVTVPK 135
>01_01_0229 - 1943473-1943922
Length = 149
Score = 35.1 bits (77), Expect = 0.059
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +1
Query: 379 SRQFVRRYALPEGAAPETVESRLSSDGVLTITAPR 483
S QF+RR+ LPE A + V++ + +GVLT+T P+
Sbjct: 101 SGQFMRRFRLPENAKVDQVKASM-ENGVLTVTVPK 134
>01_01_0231 + 1951047-1951499
Length = 150
Score = 34.7 bits (76), Expect = 0.078
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +1
Query: 379 SRQFVRRYALPEGAAPETVESRLSSDGVLTITAPR 483
S QF+RR+ LPE A + V++ + +GVLT+T P+
Sbjct: 102 SGQFMRRFRLPENAKVDQVKAGM-ENGVLTVTVPK 135
>12_01_0061 + 514798-515967
Length = 389
Score = 33.9 bits (74), Expect = 0.14
Identities = 22/51 (43%), Positives = 26/51 (50%)
Frame = -2
Query: 581 SWVPSLWSLISLRTGPVCAMGTFLSPLTASGTFLGAVMVRTPSDDSRDSTV 429
SW PS +LISL +G CA F S + A+ FL SDD D TV
Sbjct: 295 SWSPSKLNLISLGSGRFCAAKIFRSNMPAAAAFL------DDSDDDDDYTV 339
>11_02_0041 - 7669692-7670312
Length = 206
Score = 33.9 bits (74), Expect = 0.14
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = +1
Query: 385 QFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVP 492
+F RR+ +P GA V +RL DGVLT+T P KVP
Sbjct: 141 RFWRRFRMPPGADVGRVAARLD-DGVLTVTVP-KVP 174
>02_05_0494 + 29486960-29487454
Length = 164
Score = 33.5 bits (73), Expect = 0.18
Identities = 15/35 (42%), Positives = 24/35 (68%)
Frame = +1
Query: 382 RQFVRRYALPEGAAPETVESRLSSDGVLTITAPRK 486
R V ++ LPE AA + +R++ DGVLT+T P++
Sbjct: 106 RAAVTQFRLPEDAAADEASARMA-DGVLTVTVPKR 139
>01_01_0227 + 1933247-1933699
Length = 150
Score = 32.7 bits (71), Expect = 0.31
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +1
Query: 379 SRQFVRRYALPEGAAPETVESRLSSDGVLTITAPRK 486
S +F RR+ LP GA + V + + +GVLT+T P++
Sbjct: 102 SGKFQRRFRLPRGARVDQVSASM-DNGVLTVTVPKE 136
>03_05_0865 - 28365430-28367640
Length = 736
Score = 31.5 bits (68), Expect = 0.73
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 483 EGTRRRQGREKGAHRTDRSRSQGDQGPERGN 575
+ +RR + RE+G DR R +GD+ ERG+
Sbjct: 114 DSSRRDRDRERGDRDRDRDRERGDRDRERGD 144
>01_01_0599 - 4448290-4448790
Length = 166
Score = 31.5 bits (68), Expect = 0.73
Identities = 14/47 (29%), Positives = 27/47 (57%)
Frame = +1
Query: 385 QFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPI 525
+F+R++ LP+ A + + S + DGVLT+T + P K + + +
Sbjct: 118 KFMRKFVLPDNADVDKI-SAVCQDGVLTVTVEKLPPPEPKKPKTIEV 163
>02_05_0308 -
27754340-27754634,27755591-27755696,27755781-27755855,
27756039-27757410
Length = 615
Score = 30.3 bits (65), Expect = 1.7
Identities = 11/33 (33%), Positives = 22/33 (66%)
Frame = -2
Query: 314 VFTEISSGEKCCTSRLTWNLSLSAFMLEPRSRD 216
+F ++S GE+C ++ T+N+ +SA + R+ D
Sbjct: 401 LFEKMSKGEECLPNQDTYNIIISAMFMRKRAED 433
>01_05_0523 -
22915390-22915901,22916496-22916619,22916708-22916844,
22917383-22917518,22917614-22917951,22919426-22919663
Length = 494
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 474 RAEEGTRRRQGREKGAHRTDRSRSQGDQGPERG 572
R EEG RRR+G+ KGA + + D P G
Sbjct: 8 REEEGRRRRKGKGKGAGEMVLQQEEEDAAPAMG 40
>02_05_0444 -
29073740-29073844,29074417-29074725,29077910-29077981,
29078541-29078633,29078825-29078982,29079247-29079415,
29080204-29081241,29081632-29081759,29081926-29081985,
29082033-29083077
Length = 1058
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 504 GREKGAHRTDRSRSQGDQGPERGNPGC 584
GR R R + QG++G ERG GC
Sbjct: 73 GRTTTTRRRRRRKQQGEEGEERGERGC 99
>12_02_0643 - 21461123-21461902
Length = 259
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +2
Query: 464 SPSPRRGRYPTPSRERERCPSHRPVPF 544
SPSP RGR TP R R P+ P P+
Sbjct: 211 SPSPLRGRPRTPPPPRPRPPTTPPRPY 237
>01_01_0228 + 1940149-1940649
Length = 166
Score = 28.7 bits (61), Expect = 5.1
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = +1
Query: 388 FVRRYALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKGER 513
+V R LP G E V + VL IT R V KG+R
Sbjct: 52 YVFRADLPAGVKKEEVRVEVDEGNVLVITGERSVRREEKGQR 93
>11_01_0319 -
2396835-2396951,2397035-2397105,2397219-2397297,
2397417-2397458,2397670-2397723,2397836-2397868,
2397959-2398039,2398144-2398230,2398313-2398388,
2398633-2398808,2398912-2399034,2399249-2399361,
2399521-2399632,2400054-2400273,2401986-2402314,
2402408-2402713,2403580-2403878,2404079-2404181,
2404266-2404369,2404840-2404906,2404911-2405076,
2405241-2405956
Length = 1157
Score = 28.3 bits (60), Expect = 6.8
Identities = 19/62 (30%), Positives = 28/62 (45%)
Frame = +2
Query: 347 TKRRKTSTGIFQGSSSDVTRCLKARRLRLWNRGCHQTGFSPSPRRGRYPTPSRERERCPS 526
++RR+ + G TR + RR + C +G RR R+ SR R+R S
Sbjct: 12 SRRRRRDSDDESGERDLDTR--RHRRRSPSSESCSSSGDDDRSRRHRHDESSRRRQRDQS 69
Query: 527 HR 532
HR
Sbjct: 70 HR 71
>07_03_0725 +
20991640-20992471,20993308-20993418,20993542-20993739,
20993860-20993891,20993943-20994153,20994806-20995043,
20995507-20995657,20996171-20996533
Length = 711
Score = 28.3 bits (60), Expect = 6.8
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = +1
Query: 109 DQDFGLALTPNDMLAAVACPVLSEDYFRPWRQLAAASRD 225
D+ FGLAL DM A AC F+ R L RD
Sbjct: 75 DRVFGLALCRGDMRDAAACAGCVSGAFQRLRALCGRDRD 113
>03_04_0159 + 17832666-17832938,17833634-17833873
Length = 170
Score = 28.3 bits (60), Expect = 6.8
Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 5/42 (11%)
Frame = +3
Query: 459 GSHHHRAEEGTRRRQGREKGAHRTDRSRSQ-----GDQGPER 569
G H R R R+GR +G R RS + GDQGP R
Sbjct: 7 GKHPKRGRGRPRGRRGRGRGRGRGGRSLASPAAGPGDQGPRR 48
>03_02_0467 +
8707777-8707892,8708030-8708096,8708190-8708260,
8708629-8708746,8708820-8708893,8709278-8709333,
8709448-8709531,8709611-8709698,8709786-8709863,
8710335-8710391,8710606-8711044
Length = 415
Score = 28.3 bits (60), Expect = 6.8
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +2
Query: 395 DVTRCLKARRLRLWNRGCHQTGFSPSPRR 481
+ + + A R+RLWN+G F P R+
Sbjct: 189 ETAKVVSANRVRLWNKGVDSESFHPKFRK 217
>01_06_0381 +
28878811-28879120,28880189-28880331,28880753-28881532,
28882568-28883968
Length = 877
Score = 28.3 bits (60), Expect = 6.8
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +3
Query: 453 RRGSHHHRAEEGTRRRQGREKGAHRTDRSRSQ 548
R+GS+H + E +++R K A DRS ++
Sbjct: 448 RKGSNHGKGESKSKKRSSTSKDASSPDRSSAE 479
>07_01_0628 - 4691991-4692806,4694291-4694293,4694527-4694637
Length = 309
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = +2
Query: 407 CLKARRLRLWNRGCHQTGFSPSPRRGRYPTPSR 505
C K R W R C + R GRY PSR
Sbjct: 128 CFKCGRAGHWARECPYSSGGGGGRTGRYSPPSR 160
>01_01_0277 +
2274383-2274465,2274889-2274955,2275040-2275110,
2275550-2275667,2275755-2275828,2276094-2276149,
2276237-2276320,2276422-2276509,2276602-2276679,
2276814-2276870,2277074-2277578
Length = 426
Score = 27.9 bits (59), Expect = 9.0
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +2
Query: 395 DVTRCLKARRLRLWNRGCHQTGFSPSPR 478
+ + A R+RLWN+G F P R
Sbjct: 178 ETAHVISANRIRLWNKGVDSASFHPKFR 205
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,485,250
Number of Sequences: 37544
Number of extensions: 425006
Number of successful extensions: 1727
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1604
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1718
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1957111448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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