Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0850
         (750 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       24   4.4  
U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic aci...    24   5.8  
M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    23   7.6  

>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -1

Query: 531 CPPLIQLCGRER 496
           CPPLI+ C  ER
Sbjct: 87  CPPLIEFCDAER 98


>U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic acid
           binding protein protein.
          Length = 388

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 209 LSETNIHWACIKATSNSK 262
           LS  ++HW+CI  T+  K
Sbjct: 55  LSNVDLHWSCIGCTNMLK 72


>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +1

Query: 694 GRHHVXDNECNKRMQRVXR 750
           G HH+  +EC +  QR  R
Sbjct: 555 GAHHIGHSECARSAQRCSR 573


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 777,602
Number of Sequences: 2352
Number of extensions: 15727
Number of successful extensions: 24
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)