Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0847
         (540 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC006350-1|AAH06350.1|  619|Homo sapiens BUD13 homolog (S. cerev...    31   2.6  
BC048251-1|AAH48251.1|  322|Homo sapiens ZDHHC12 protein protein.      30   4.5  
AL441992-6|CAI15406.1|  210|Homo sapiens zinc finger, DHHC-type ...    30   4.5  
Y09723-1|CAA70889.1|  803|Homo sapiens Miz-1 protein protein.          29   7.9  
BC126163-1|AAI26164.1|  803|Homo sapiens zinc finger and BTB dom...    29   7.9  
AL034555-3|CAB85445.1|  803|Homo sapiens zinc finger and BTB dom...    29   7.9  
AK223618-1|BAD97338.1|  803|Homo sapiens zinc finger and BTB dom...    29   7.9  

>BC006350-1|AAH06350.1|  619|Homo sapiens BUD13 homolog (S.
           cerevisiae) protein.
          Length = 619

 Score = 31.1 bits (67), Expect = 2.6
 Identities = 18/45 (40%), Positives = 23/45 (51%)
 Frame = -2

Query: 470 AGLSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLRSR 336
           +G S  R +HD+  PS  PR+ R  S+D S PR      PD   R
Sbjct: 211 SGASPRRVRHDSPDPSP-PRRARHGSSDISSPRRVHNNSPDTSRR 254


>BC048251-1|AAH48251.1|  322|Homo sapiens ZDHHC12 protein protein.
          Length = 322

 Score = 30.3 bits (65), Expect = 4.5
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = +1

Query: 142 TPLRPKPA*PNPARICSLWSPESRE 216
           TP  P P  P PA +CS  SPE R+
Sbjct: 68  TPTPPTPVLPGPASLCSPASPELRQ 92


>AL441992-6|CAI15406.1|  210|Homo sapiens zinc finger, DHHC-type
           containing 12 protein.
          Length = 210

 Score = 30.3 bits (65), Expect = 4.5
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = +1

Query: 142 TPLRPKPA*PNPARICSLWSPESRE 216
           TP  P P  P PA +CS  SPE R+
Sbjct: 68  TPTPPTPVLPGPASLCSPASPELRQ 92


>Y09723-1|CAA70889.1|  803|Homo sapiens Miz-1 protein protein.
          Length = 803

 Score = 29.5 bits (63), Expect = 7.9
 Identities = 14/36 (38%), Positives = 24/36 (66%)
 Frame = +3

Query: 120 PSAGLCLNASKAEASLAESGKDMLTVEPRESGGSKQ 227
           P++G+   A++AEA+L+ES +  + VEP   G  +Q
Sbjct: 201 PTSGMA--AAEAEAALSESSEQEMEVEPARKGEEEQ 234


>BC126163-1|AAI26164.1|  803|Homo sapiens zinc finger and BTB domain
           containing 17 protein.
          Length = 803

 Score = 29.5 bits (63), Expect = 7.9
 Identities = 14/36 (38%), Positives = 24/36 (66%)
 Frame = +3

Query: 120 PSAGLCLNASKAEASLAESGKDMLTVEPRESGGSKQ 227
           P++G+   A++AEA+L+ES +  + VEP   G  +Q
Sbjct: 201 PTSGMA--AAEAEAALSESSEQEMEVEPARKGEEEQ 234


>AL034555-3|CAB85445.1|  803|Homo sapiens zinc finger and BTB domain
           containing 17 protein.
          Length = 803

 Score = 29.5 bits (63), Expect = 7.9
 Identities = 14/36 (38%), Positives = 24/36 (66%)
 Frame = +3

Query: 120 PSAGLCLNASKAEASLAESGKDMLTVEPRESGGSKQ 227
           P++G+   A++AEA+L+ES +  + VEP   G  +Q
Sbjct: 201 PTSGMA--AAEAEAALSESSEQEMEVEPARKGEEEQ 234


>AK223618-1|BAD97338.1|  803|Homo sapiens zinc finger and BTB domain
           containing 17 variant protein.
          Length = 803

 Score = 29.5 bits (63), Expect = 7.9
 Identities = 14/36 (38%), Positives = 24/36 (66%)
 Frame = +3

Query: 120 PSAGLCLNASKAEASLAESGKDMLTVEPRESGGSKQ 227
           P++G+   A++AEA+L+ES +  + VEP   G  +Q
Sbjct: 201 PTSGMA--AAEAEAALSESSEQEMEVEPARKGEEEQ 234


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,290,732
Number of Sequences: 237096
Number of extensions: 1607925
Number of successful extensions: 4318
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4117
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4309
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5251598958
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)