Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0845
         (750 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    34   0.001
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    25   0.65 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   1.5  
DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    23   2.0  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    23   2.0  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        23   3.4  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   6.0  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 34.3 bits (75), Expect = 0.001
 Identities = 24/65 (36%), Positives = 36/65 (55%)
 Frame = +3

Query: 315 VKKSRKSQNDTIIQVTSEKDKTPEPIVDSEQEKKREEDLWAKFLEGTDSKPKPVLKEKSV 494
           V++ ++    T++ VT E  + PE   D E++KKREED  AKF EG     K +L  K  
Sbjct: 519 VQQMKEFDGKTLVSVTKEGLELPE---DEEEKKKREEDK-AKF-EGLCKVMKSILDNKVE 573

Query: 495 DLVTN 509
            +V +
Sbjct: 574 KVVVS 578



 Score = 27.5 bits (58), Expect = 0.12
 Identities = 23/91 (25%), Positives = 40/91 (43%), Gaps = 4/91 (4%)
 Frame = +3

Query: 303 KINKVKKSRKSQNDTIIQVTSEKDKTPEPIVDSEQEKKREEDLWAKFLEGTD-SKPKPVL 479
           KI ++ K         I++  EK++  E   D  +E+K+EE       EG D  K KP +
Sbjct: 195 KIKEIVKKHSQFIGYPIKLVVEKEREKELSDDEAEEEKKEE-------EGEDKDKDKPKI 247

Query: 480 KEKSVDL---VTNPERSSNNTVNYKKTNDDD 563
           ++   D        ++    T+  K T D++
Sbjct: 248 EDVGEDEDEDTKKEDKKKKKTIKEKYTEDEE 278


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 25.0 bits (52), Expect = 0.65
 Identities = 14/91 (15%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
 Frame = +3

Query: 456 DSKPKPVLKEKSVDLVTNPERSSNNTVNYKKTNDDDAKEKERRIFEFAGEKIVVENNVIK 635
           + + K +++   +DL++N  ++   T +YK  ND     +    F    +   +   +  
Sbjct: 252 EREKKKIIRNDFIDLLSNLRKTETITDSYKFDNDIKMAAQAIAFFSAGNDTTSITLALTC 311

Query: 636 ERLKVDETSMEAIKSDGSQ--NQTSDITAQS 722
             L +++T  + ++ + ++  N+  + T ++
Sbjct: 312 YELSLNKTIQDRLRHEVTEIYNENGEFTYEN 342


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = -2

Query: 425 FFSFFLLFRVNYWFRCFIFF*CNLYY 348
           F+S F++F ++  F C +     +YY
Sbjct: 215 FYSAFIIFTIHLLFYCVLIILLCIYY 240


>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +2

Query: 206 KLSEEESADDETEKQYEHEVEGK 274
           +L E+   + E  K+YE E++GK
Sbjct: 103 ELEEKYDKEGEYRKKYEAEIKGK 125


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
 Frame = -3

Query: 154 YDDKQKIPKFVFLGTIFKAFI-DLCCINTLNFIDKVPLWKRLKKNSRLV 11
           Y D+  I + V++GT    FI ++  I   NF  K   W     N +L+
Sbjct: 43  YQDESPISRLVYIGTDLSYFISNVYQILAYNFWKK-KYWSEFLANLKLL 90


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +3

Query: 501 VTNPERSSNNTVNYKKTNDDD 563
           + N +  S + +NYK TND++
Sbjct: 361 LNNIQNLSQSGINYKDTNDNN 381


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +3

Query: 432 WAKFLEGTDSKPKPVLKEK 488
           W KF+EGT  K    L ++
Sbjct: 266 WYKFVEGTTRKQAVTLNDR 284


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,327
Number of Sequences: 336
Number of extensions: 2483
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)