Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0842
(700 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g53230.1 68416.m05865 cell division cycle protein 48, putativ... 311 3e-85
At5g03340.1 68418.m00286 cell division cycle protein 48, putativ... 310 8e-85
At3g09840.1 68416.m01174 cell division cycle protein 48 (CDC48A)... 304 4e-83
At3g56690.1 68416.m06306 calmodulin-binding protein identical to... 192 1e-49
At3g01610.1 68416.m00092 AAA-type ATPase family protein contains... 191 4e-49
At1g03000.1 68414.m00271 AAA-type ATPase family protein contains... 190 1e-48
At5g08470.1 68418.m00999 peroxisome biogenesis protein (PEX1) id... 176 1e-44
At5g15250.1 68418.m01786 FtsH protease, putative similar to FtsH... 173 1e-43
At5g42270.1 68418.m05145 FtsH protease, putative similar to FtsH... 164 4e-41
At1g50250.1 68414.m05634 cell division protein ftsH homolog 1, c... 163 8e-41
At2g03670.1 68415.m00326 AAA-type ATPase family protein contains... 161 3e-40
At2g30950.1 68415.m03775 FtsH protease (VAR2) identical to zinc ... 161 4e-40
At3g47060.1 68416.m05110 FtsH protease, putative contains simila... 158 3e-39
At1g45000.1 68414.m05158 26S proteasome regulatory complex subun... 158 4e-39
At1g06430.1 68414.m00680 FtsH protease, putative similar to zinc... 157 7e-39
At5g58870.1 68418.m07376 FtsH protease, putative contains simila... 157 9e-39
At5g43010.1 68418.m05245 26S proteasome AAA-ATPase subunit (RPT4... 157 9e-39
At2g29080.1 68415.m03535 FtsH protease, putative similar to AAA-... 152 2e-37
At3g16290.1 68416.m02056 FtsH protease, putative contains simila... 149 1e-36
At3g05530.1 68416.m00606 26S proteasome AAA-ATPase subunit (RPT5... 148 4e-36
At1g53750.1 68414.m06115 26S proteasome AAA-ATPase subunit (RPT1... 147 5e-36
At1g07510.1 68414.m00804 FtsH protease, putative similar to AAA-... 146 9e-36
At3g02450.1 68416.m00232 cell division protein ftsH, putative si... 146 1e-35
At1g09100.1 68414.m01016 26S protease regulatory subunit 6A, put... 146 1e-35
At5g53170.1 68418.m06610 FtsH protease, putative similar to ATP-... 145 3e-35
At1g80350.1 68414.m09406 katanin 1 (KTN1) identical to katanin 1... 144 5e-35
At1g53780.1 68414.m06120 26S proteasome AAA-ATPase subunit, puta... 144 5e-35
At2g26140.1 68415.m03137 FtsH protease, putative contains simila... 143 9e-35
At5g58290.1 68418.m07297 26S proteasome AAA-ATPase subunit (RPT3... 142 2e-34
At2g20140.1 68415.m02353 26S protease regulatory complex subunit... 142 2e-34
At5g20000.1 68418.m02380 26S proteasome AAA-ATPase subunit, puta... 141 5e-34
At5g19990.1 68418.m02379 26S proteasome AAA-ATPase subunit (RPT6a) 141 5e-34
At4g29040.1 68417.m04153 26S proteasome AAA-ATPase subunit (RPT2... 141 5e-34
At4g23940.1 68417.m03443 FtsH protease, putative contains simila... 140 1e-33
At1g02890.1 68414.m00256 AAA-type ATPase family protein contains... 139 1e-33
At4g02480.1 68417.m00335 AAA-type ATPase family protein contains... 136 1e-32
At4g28000.1 68417.m04016 AAA-type ATPase family protein contains... 134 4e-32
At4g24860.1 68417.m03559 AAA-type ATPase family protein contains... 134 7e-32
At2g45500.1 68415.m05659 AAA-type ATPase family protein similar ... 133 1e-31
At1g64110.2 68414.m07264 AAA-type ATPase family protein contains... 132 2e-31
At1g64110.1 68414.m07263 AAA-type ATPase family protein contains... 132 2e-31
At5g64580.1 68418.m08116 AAA-type ATPase family protein similar ... 131 4e-31
At1g50140.1 68414.m05623 AAA-type ATPase family protein contains... 130 7e-31
At3g19740.1 68416.m02499 AAA-type ATPase family protein contains... 128 5e-30
At4g27680.1 68417.m03980 MSP1 protein, putative / intramitochond... 126 1e-29
At3g15120.1 68416.m01913 AAA-type ATPase family protein contains... 124 4e-29
At2g27600.1 68415.m03346 AAA-type ATPase family protein / vacuol... 123 1e-28
At5g53540.1 68418.m06653 MSP1 protein, putative / intramitochond... 123 1e-28
At4g04910.1 68417.m00714 AAA-type ATPase family protein similar ... 123 1e-28
At2g34560.2 68415.m04246 katanin, putative similar to katanin p6... 121 5e-28
At2g34560.1 68415.m04245 katanin, putative similar to katanin p6... 121 5e-28
At3g27120.1 68416.m03393 spastin ATPase, putative similar to SWI... 118 4e-27
At1g62130.1 68414.m07010 AAA-type ATPase family protein contains... 113 8e-26
At1g05910.1 68414.m00620 cell division cycle protein 48-related ... 112 2e-25
At1g79560.1 68414.m09275 FtsH protease, putative contains simila... 103 1e-22
At3g04340.1 68416.m00459 FtsH protease family protein similar to... 97 7e-21
At4g04180.1 68417.m00593 AAA-type ATPase family protein contains... 91 6e-19
At2g18330.1 68415.m02136 AAA-type ATPase family protein contains... 60 2e-09
At4g36580.1 68417.m05193 AAA-type ATPase family protein contains... 54 9e-08
At4g24710.1 68417.m03536 AAA-type ATPase family protein similar ... 54 1e-07
At3g03060.1 68416.m00302 AAA-type ATPase family protein contains... 52 4e-07
At5g16930.1 68418.m01984 AAA-type ATPase family protein contains... 51 6e-07
At5g17760.1 68418.m02082 AAA-type ATPase family protein contains... 39 0.004
At5g17730.1 68418.m02079 AAA-type ATPase family protein contains... 38 0.005
At3g50940.1 68416.m05577 AAA-type ATPase family protein contains... 38 0.006
At5g17750.1 68418.m02081 AAA-type ATPase family protein contains... 37 0.015
At5g17740.1 68418.m02080 AAA-type ATPase family protein h-bcs1, ... 36 0.020
At4g05380.1 68417.m00820 AAA-type ATPase family protein contains... 35 0.045
At1g43910.1 68414.m05066 AAA-type ATPase family protein contains... 35 0.060
At2g18193.1 68415.m02117 AAA-type ATPase family protein contains... 34 0.079
At2g46620.1 68415.m05815 AAA-type ATPase family protein contains... 33 0.14
At2g18190.1 68415.m02116 AAA-type ATPase family protein contains... 33 0.14
At5g57480.1 68418.m07183 AAA-type ATPase family protein contains... 32 0.32
At5g53890.1 68418.m06703 leucine-rich repeat transmembrane prote... 32 0.32
At5g25930.1 68418.m03081 leucine-rich repeat family protein / pr... 32 0.32
At5g39020.1 68418.m04722 protein kinase family protein contains ... 32 0.42
At5g38250.1 68418.m04611 serine/threonine protein kinase, putati... 32 0.42
At1g66920.1 68414.m07605 serine/threonine protein kinase, putati... 32 0.42
At1g66910.1 68414.m07604 protein kinase, putative similar to rec... 32 0.42
At4g25835.1 68417.m03716 AAA-type ATPase family protein contains... 31 0.56
At3g50930.1 68416.m05576 AAA-type ATPase family protein contains... 31 0.56
At5g50920.1 68418.m06315 ATP-dependent Clp protease ATP-binding ... 31 0.73
At3g10810.1 68416.m01301 zinc finger (C3HC4-type RING finger) fa... 31 0.73
At4g05340.1 68417.m00816 hypothetical protein 31 0.97
At3g11390.1 68416.m01387 DC1 domain-containing protein contains ... 31 0.97
At1g66930.1 68414.m07606 serine/threonine protein kinase family ... 31 0.97
At5g58160.1 68418.m07280 formin homology 2 domain-containing pro... 30 1.3
At3g48870.1 68416.m05338 ATP-dependent Clp protease ATP-binding ... 30 1.3
At5g20050.1 68418.m02387 protein kinase family protein contains ... 30 1.7
At3g28520.1 68416.m03562 AAA-type ATPase family protein contains... 30 1.7
At3g28510.1 68416.m03561 AAA-type ATPase family protein contains... 30 1.7
At2g37280.1 68415.m04573 ABC transporter family protein similar ... 30 1.7
At3g63100.1 68416.m07087 glycine-rich protein 29 2.2
At3g28540.1 68416.m03564 AAA-type ATPase family protein contains... 29 2.2
At1g79670.2 68414.m09292 wall-associated kinase, putative simila... 29 2.2
At1g79670.1 68414.m09291 wall-associated kinase, putative simila... 29 2.2
At5g38240.1 68418.m04610 serine/threonine protein kinase, putati... 29 3.0
At4g13750.1 68417.m02134 expressed protein 29 3.0
At5g53350.1 68418.m06630 ATP-dependent Clp protease ATP-binding ... 29 3.9
At5g39030.1 68418.m04723 protein kinase family protein contains ... 29 3.9
At3g28580.1 68416.m03568 AAA-type ATPase family protein contains... 29 3.9
At1g67000.1 68414.m07618 protein kinase family protein contains ... 29 3.9
At1g33360.1 68414.m04129 ATP-dependent Clp protease ATP-binding ... 29 3.9
At1g18150.2 68414.m02253 mitogen-activated protein kinase, putat... 29 3.9
At1g18150.1 68414.m02252 mitogen-activated protein kinase, putat... 29 3.9
At1g01540.2 68414.m00071 protein kinase family protein contains ... 29 3.9
At1g01540.1 68414.m00070 protein kinase family protein contains ... 29 3.9
At5g45200.1 68418.m05548 disease resistance protein (TIR-NBS-LRR... 28 5.2
At5g40010.1 68418.m04852 AAA-type ATPase family protein contains... 28 5.2
At5g38260.1 68418.m04612 serine/threonine protein kinase, putati... 28 5.2
At5g18350.1 68418.m02159 disease resistance protein (TIR-NBS-LRR... 28 5.2
At4g34500.1 68417.m04904 protein kinase family protein contains ... 28 5.2
At4g25390.2 68417.m03653 protein kinase family protein contains ... 28 5.2
At4g25390.1 68417.m03652 protein kinase family protein contains ... 28 5.2
At3g60730.1 68416.m06794 pectinesterase family protein contains ... 28 5.2
At1g66980.1 68414.m07616 protein kinase family protein / glycero... 28 5.2
At4g02630.1 68417.m00357 protein kinase family protein contains ... 28 6.8
At4g16490.1 68417.m02496 armadillo/beta-catenin repeat family pr... 27 9.0
At4g01330.1 68417.m00173 protein kinase family protein contains ... 27 9.0
At3g53480.1 68416.m05904 ABC transporter family protein PDR5-lik... 27 9.0
At3g28600.1 68416.m03570 AAA-type ATPase family protein contains... 27 9.0
At2g48100.2 68415.m06021 exonuclease family protein contains Pfa... 27 9.0
At2g48100.1 68415.m06020 exonuclease family protein contains Pfa... 27 9.0
At1g26170.1 68414.m03194 importin beta-2 subunit family protein ... 27 9.0
At1g25390.1 68414.m03152 protein kinase family protein contains ... 27 9.0
>At3g53230.1 68416.m05865 cell division cycle protein 48, putative /
CDC48, putative very strong similarity to SP|P54609 Cell
division cycle protein 48 homolog {Arabidopsis thaliana};
contains Pfam profiles PF00004: ATPase AAA family,
PF02359: Cell division protein 48 (CDC48) N-terminal
domain
Length = 815
Score = 311 bits (763), Expect = 3e-85
Identities = 147/195 (75%), Positives = 164/195 (84%)
Frame = +2
Query: 2 PPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSASPCVLFFDE 181
PPGCGKTLLAKAIANECQANFIS+KGPELLTMWFGESEANVR+IFDKAR ++PCVLFFDE
Sbjct: 523 PPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDE 582
Query: 182 LDSIAKXXXXXXXXXXXXXXXVINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGR 361
LDSIA V+NQ+LTEMDGM AKK VFIIGATNRPDIIDPA+LRPGR
Sbjct: 583 LDSIATQRGNSVGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGR 642
Query: 362 LDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQGFSGADLTEICQRACKLA 541
LDQLIYIPLPDE+SR I ++ LRKSP+AKDVDL +AK TQGFSGAD+TEICQR+CK A
Sbjct: 643 LDQLIYIPLPDEESRYQIFKSCLRKSPVAKDVDLRALAKYTQGFSGADITEICQRSCKYA 702
Query: 542 IRQAIEAEIHRERSR 586
IR+ IE +I +ER R
Sbjct: 703 IRENIEKDIEKERKR 717
Score = 160 bits (389), Expect = 7e-40
Identities = 78/186 (41%), Positives = 119/186 (63%)
Frame = +2
Query: 2 PPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSASPCVLFFDE 181
PPG GKTL+A+A+ANE A F + GPE+++ GESE+N+R F++A +P ++F DE
Sbjct: 250 PPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDE 309
Query: 182 LDSIAKXXXXXXXXXXXXXXXVINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGR 361
+DSIA +++Q+LT MDG+ ++ +V ++GATNRP+ IDPA+ R GR
Sbjct: 310 IDSIAPKREKTHGEVERR---IVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGR 366
Query: 362 LDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQGFSGADLTEICQRACKLA 541
D+ I I +PDE R +LR + + +A+DVDL ++K T G+ GADL +C A
Sbjct: 367 FDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERVSKDTHGYVGADLAALCTEAALQC 426
Query: 542 IRQAIE 559
IR+ ++
Sbjct: 427 IREKMD 432
>At5g03340.1 68418.m00286 cell division cycle protein 48, putative /
CDC48, putative very strong similarity to SP|P54609 Cell
division cycle protein 48 homolog {Arabidopsis thaliana};
contains Pfam profiles PF00004: ATPase AAA family,
PF02359: Cell division protein 48 (CDC48) N-terminal
domain; supporting cDNA gi|26449351|dbj|AK117125.1|
Length = 810
Score = 310 bits (760), Expect = 8e-85
Identities = 155/221 (70%), Positives = 169/221 (76%)
Frame = +2
Query: 2 PPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSASPCVLFFDE 181
PPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVR+IFDKAR ++PCVLFFDE
Sbjct: 522 PPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDE 581
Query: 182 LDSIAKXXXXXXXXXXXXXXXVINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGR 361
LDSIA V+NQ+LTEMDGM AKK VFIIGATNRPDIID A+LRPGR
Sbjct: 582 LDSIATQRGNSAGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGR 641
Query: 362 LDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQGFSGADLTEICQRACKLA 541
LDQLIYIPLPDE SR I +A LRKSP+AKDVD++ +AK TQGFSGAD+TEICQRACK A
Sbjct: 642 LDQLIYIPLPDEDSRLNIFKACLRKSPVAKDVDVTALAKYTQGFSGADITEICQRACKYA 701
Query: 542 IRQAIEAEIHRERSRXXXXXXXVMDMGRXKTPFPEISRAHF 664
IR+ IE +I ER R DM EI AHF
Sbjct: 702 IRENIEKDIENERRRSQNPEAMEEDM--VDDEVSEIRAAHF 740
Score = 161 bits (390), Expect = 5e-40
Identities = 79/186 (42%), Positives = 119/186 (63%)
Frame = +2
Query: 2 PPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSASPCVLFFDE 181
PPG GKTL+A+A+ANE A F + GPE+++ GESE+N+R F++A +P ++F DE
Sbjct: 249 PPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDE 308
Query: 182 LDSIAKXXXXXXXXXXXXXXXVINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGR 361
+DSIA +++Q+LT MDG+ ++ +V ++GATNRP+ IDPA+ R GR
Sbjct: 309 IDSIAPKREKTNGEVERR---IVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGR 365
Query: 362 LDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQGFSGADLTEICQRACKLA 541
D+ I I +PDE R +LR + + +A+DVDL I+K T G+ GADL +C A
Sbjct: 366 FDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQC 425
Query: 542 IRQAIE 559
IR+ ++
Sbjct: 426 IREKMD 431
>At3g09840.1 68416.m01174 cell division cycle protein 48 (CDC48A)
(CDC48) identical to SP|P54609 Cell division cycle
protein 48 homolog {Arabidopsis thaliana}
Length = 809
Score = 304 bits (746), Expect = 4e-83
Identities = 148/196 (75%), Positives = 163/196 (83%), Gaps = 1/196 (0%)
Frame = +2
Query: 2 PPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSASPCVLFFDE 181
PPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVR+IFDKAR ++PCVLFFDE
Sbjct: 522 PPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDE 581
Query: 182 LDSIA-KXXXXXXXXXXXXXXXVINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPG 358
LDSIA + V+NQ+LTEMDGM AKK VFIIGATNRPDIID A+LRPG
Sbjct: 582 LDSIATQRGGGSGGDGGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPG 641
Query: 359 RLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQGFSGADLTEICQRACKL 538
RLDQLIYIPLPDE SR I +A LRKSPIAKDVD+ +AK TQGFSGAD+TEICQRACK
Sbjct: 642 RLDQLIYIPLPDEDSRLNIFKAALRKSPIAKDVDIGALAKYTQGFSGADITEICQRACKY 701
Query: 539 AIRQAIEAEIHRERSR 586
AIR+ IE +I +E+ R
Sbjct: 702 AIRENIEKDIEKEKRR 717
Score = 161 bits (390), Expect = 5e-40
Identities = 79/186 (42%), Positives = 119/186 (63%)
Frame = +2
Query: 2 PPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSASPCVLFFDE 181
PPG GKTL+A+A+ANE A F + GPE+++ GESE+N+R F++A +P ++F DE
Sbjct: 249 PPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDE 308
Query: 182 LDSIAKXXXXXXXXXXXXXXXVINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGR 361
+DSIA +++Q+LT MDG+ ++ +V ++GATNRP+ IDPA+ R GR
Sbjct: 309 IDSIAPKREKTNGEVERR---IVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGR 365
Query: 362 LDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQGFSGADLTEICQRACKLA 541
D+ I I +PDE R +LR + + +A+DVDL I+K T G+ GADL +C A
Sbjct: 366 FDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQC 425
Query: 542 IRQAIE 559
IR+ ++
Sbjct: 426 IREKMD 431
>At3g56690.1 68416.m06306 calmodulin-binding protein identical to
calmodulin-binding protein GI:6760428 from [Arabidopsis
thaliana]
Length = 1022
Score = 192 bits (469), Expect = 1e-49
Identities = 88/188 (46%), Positives = 131/188 (69%)
Frame = +2
Query: 2 PPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSASPCVLFFDE 181
PPGC KTL+A+A+A+E + NF++VKGPEL + W GESE VR +F KAR+ +P ++FFDE
Sbjct: 766 PPGCSKTLMARAVASEAKLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDE 825
Query: 182 LDSIAKXXXXXXXXXXXXXXXVINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGR 361
+DS+A V++Q+L E+DG+ + V +I ATNRPD ID A+LRPGR
Sbjct: 826 IDSLASIRGKENDGVSVSDR-VMSQLLVELDGLHQRVGVTVIAATNRPDKIDSALLRPGR 884
Query: 362 LDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQGFSGADLTEICQRACKLA 541
D+L+Y+ P+E REAIL+ +LRK P + D+ L +A +T+G++GAD++ IC+ A A
Sbjct: 885 FDRLLYVGPPNETDREAILKIHLRKIPCSSDICLKELASITKGYTGADISLICREAAIAA 944
Query: 542 IRQAIEAE 565
+ +++E E
Sbjct: 945 LEESLEME 952
Score = 133 bits (321), Expect = 1e-31
Identities = 71/187 (37%), Positives = 104/187 (55%), Gaps = 1/187 (0%)
Frame = +2
Query: 2 PPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSASPCVLFFDE 181
PPG GKT LA+ A NF SV GPE+++ + GESE + ++F A +A+P V+F D+
Sbjct: 426 PPGTGKTSLARTFARHSGVNFFSVNGPEIISQYLGESEKALDEVFRSASNATPAVVFIDD 485
Query: 182 LDSIAKXXXXXXXXXXXXXXXVINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGR 361
LD+IA ++ +L MDG+ V +I ATNRPD I+PA+ RPGR
Sbjct: 486 LDAIA---PARKEGGEELSQRMVATLLNLMDGISRTDGVVVIAATNRPDSIEPALRRPGR 542
Query: 362 LDQLIYIPLPDEKSREAILRANLR-KSPIAKDVDLSYIAKVTQGFSGADLTEICQRACKL 538
LD+ I I +P R IL LR ++ + +A T GF GADL+ +C A +
Sbjct: 543 LDREIEIGVPSSTQRSDILHIILRGMRHSLSNIQVEQLAMATHGFVGADLSALCCEAAFV 602
Query: 539 AIRQAIE 559
+R+ ++
Sbjct: 603 CLRRHLD 609
>At3g01610.1 68416.m00092 AAA-type ATPase family protein contains Pfam
domain, PF00004: ATPase, AAA family ('A'TPases
'A'ssociated with diverse cellular 'A'ctivities)
Length = 820
Score = 191 bits (465), Expect = 4e-49
Identities = 93/186 (50%), Positives = 125/186 (67%), Gaps = 1/186 (0%)
Frame = +2
Query: 2 PPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSASPCVLFFDE 181
PPGCGKTL+AKA ANE ANF+ +KG ELL + GESE +R +F +AR+ +PCV+FFDE
Sbjct: 570 PPGCGKTLIAKAAANEAGANFMHIKGAELLNKYVGESELAIRTLFQRARTCAPCVIFFDE 629
Query: 182 LDSIAKXXXXXXXXXXXXXXXVINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGR 361
+D++ ++NQ L E+DG G ++NV++IGATNRPD++DPA LRPGR
Sbjct: 630 VDALT---TSRGKEGAWVVERLLNQFLVELDG-GERRNVYVIGATNRPDVVDPAFLRPGR 685
Query: 362 LDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVT-QGFSGADLTEICQRACKL 538
L+Y+PLP+ R +IL+A RK PI VDL IAK +GFSGADL + Q+A
Sbjct: 686 FGNLLYVPLPNADERASILKAIARKKPIDPSVDLDGIAKNNCEGFSGADLAHLVQKATFQ 745
Query: 539 AIRQAI 556
A+ + I
Sbjct: 746 AVEEMI 751
Score = 132 bits (318), Expect = 3e-31
Identities = 76/197 (38%), Positives = 108/197 (54%), Gaps = 10/197 (5%)
Frame = +2
Query: 2 PPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSASPCVLFFDE 181
PPGCGKT LA AIANE F + E+++ G SE N+R++F KA +P ++F DE
Sbjct: 275 PPGCGKTKLANAIANEAGVPFYKISATEVISGVSGASEENIRELFSKAYRTAPSIVFIDE 334
Query: 182 LDSIAKXXXXXXXXXXXXXXXVINQILTEMDGMGAK--KN--------VFIIGATNRPDI 331
+D+I ++ Q+LT MDG G K KN V +IGATNRPD
Sbjct: 335 IDAIGSKRENQQREMEKR---IVTQLLTCMDGPGNKGDKNAPDSSAGFVLVIGATNRPDA 391
Query: 332 IDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQGFSGADLT 511
+DPA+ R GR + I + PDE +R IL +K + D IA++T GF GADL
Sbjct: 392 LDPALRRSGRFETEIALTAPDEDARAEILSVVAQKLRLEGPFDKKRIARLTPGFVGADLE 451
Query: 512 EICQRACKLAIRQAIEA 562
+ A + AI++ +++
Sbjct: 452 SVAYLAGRKAIKRILDS 468
>At1g03000.1 68414.m00271 AAA-type ATPase family protein contains Pfam
domain, PF00004: ATPase, AAA family ('A'TPases
'A'ssociated with diverse cellular 'A'ctivities)
Length = 941
Score = 190 bits (462), Expect = 1e-48
Identities = 96/188 (51%), Positives = 131/188 (69%), Gaps = 3/188 (1%)
Frame = +2
Query: 2 PPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSASPCVLFFDE 181
PPG GKTLLAKA+A EC NF+SVKGPEL+ M+ GESE NVRDIF+KARSA PCV+FFDE
Sbjct: 699 PPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFEKARSARPCVIFFDE 758
Query: 182 LDSIAKXXXXXXXXXXXXXXXVINQILTEMDGMG-AKKNVFIIGATNRPDIIDPAILRPG 358
LDS+A V++Q+L E+DG+ + +++FIIGA+NRPD+IDPA+LRPG
Sbjct: 759 LDSLA-PARGASGDSGGVMDRVVSQMLAEIDGLSDSSQDLFIIGASNRPDLIDPALLRPG 817
Query: 359 RLDQLIYIPL-PDEKSREAILRANLRKSPIAKDVDLSYIA-KVTQGFSGADLTEICQRAC 532
R D+L+Y+ + D RE +L+A RK +++DV L +A K F+GAD+ +C A
Sbjct: 818 RFDKLLYVGVNADASYRERVLKALTRKFKLSEDVSLYSVAKKCPSTFTGADMYALCADAW 877
Query: 533 KLAIRQAI 556
A ++ +
Sbjct: 878 FQAAKRKV 885
>At5g08470.1 68418.m00999 peroxisome biogenesis protein (PEX1)
identical to peroxisome biogenesis protein PEX1
[Arabidopsis thaliana] gi|12006272|gb|AAG44817; contains
Pfam profile PF00004: ATPase, AAA family; identical to
cDNA peroxisome biogenesis protein PEX1 (PEX1) mRNA,
partial cds GI:12006271
Length = 1130
Score = 176 bits (428), Expect = 1e-44
Identities = 91/188 (48%), Positives = 114/188 (60%)
Frame = +2
Query: 2 PPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSASPCVLFFDE 181
PPGCGKT + A A C FISVKGPELL + G SE VRDIF KA +A+PC+LFFDE
Sbjct: 886 PPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAAAAAPCILFFDE 945
Query: 182 LDSIAKXXXXXXXXXXXXXXXVINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGR 361
DSIA V+NQ LTE+DG+ VF+ AT+RPD++DPA+LRPGR
Sbjct: 946 FDSIAPKRGHDNTGVTDR---VVNQFLTELDGVEVLTGVFVFAATSRPDLLDPALLRPGR 1002
Query: 362 LDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQGFSGADLTEICQRACKLA 541
LD+L+ P R IL RK +A D+DL IA +T+GFSGADL + A A
Sbjct: 1003 LDRLLLCDFPSPPERLEILTVLSRKLLMADDIDLEPIALMTEGFSGADLQALLSDAQLAA 1062
Query: 542 IRQAIEAE 565
+ + + E
Sbjct: 1063 VHEYLNRE 1070
Score = 46.0 bits (104), Expect = 2e-05
Identities = 48/204 (23%), Positives = 84/204 (41%), Gaps = 16/204 (7%)
Frame = +2
Query: 2 PPGCGKTLLAKAIA------NECQANFISVKGPELLTMWFGESEANVRDIFDKARSASPC 163
PPG GKT+LA+A A + A+ I V L + + + +P
Sbjct: 601 PPGSGKTILARAAAKYFEEQKDLLAHVILVSCSTLALEKVQHIHHVLSSVIAEGLEHAPS 660
Query: 164 VLFFDELDSIAKXXXXXXXXXXXXXXXVINQILTE-MDGMGAKKN-------VFIIGATN 319
V+ D+LDSI ++ + LT+ +D G +N + + +
Sbjct: 661 VIILDDLDSIISSSSDTEGTQASVGVTMLTKFLTDVIDDYGEYRNSSCGIGPLAFVASVQ 720
Query: 320 RPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKSPI--AKDVDLSYIAKVTQGF 493
+ I + GR D + + P R AIL+ ++K + ++D+ L+ AK +G+
Sbjct: 721 SLEQIPQTLSSSGRFDFHVQLAAPATSERGAILKHEIQKRLLDCSEDILLNLAAK-CEGY 779
Query: 494 SGADLTEICQRACKLAIRQAIEAE 565
DL + RA AI + + E
Sbjct: 780 DAYDLEILVDRAVHAAIGRHLPLE 803
>At5g15250.1 68418.m01786 FtsH protease, putative similar to
FtsH-like protein Pftf precursor GI:4325041 from
[Nicotiana tabacum]
Length = 687
Score = 173 bits (420), Expect = 1e-43
Identities = 84/183 (45%), Positives = 112/183 (61%)
Frame = +2
Query: 2 PPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSASPCVLFFDE 181
PPG GKTLLAKAIA E F S+ G E + M+ G + RD+F+KA++ SPC++F DE
Sbjct: 264 PPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRARDLFNKAKANSPCIVFIDE 323
Query: 182 LDSIAKXXXXXXXXXXXXXXXVINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGR 361
+D++ + +NQILTEMDG V +I ATNRP+I+D A+LRPGR
Sbjct: 324 IDAVGRMRGTGIGGGNDEREQTLNQILTEMDGFAGNTGVIVIAATNRPEILDSALLRPGR 383
Query: 362 LDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQGFSGADLTEICQRACKLA 541
D+ + + LPD + RE IL+ + R + KDV LS IA T GFSGADL + A LA
Sbjct: 384 FDRQVSVGLPDIRGREEILKVHSRSKKLDKDVSLSVIAMRTPGFSGADLANLMNEAAILA 443
Query: 542 IRQ 550
R+
Sbjct: 444 GRR 446
>At5g42270.1 68418.m05145 FtsH protease, putative similar to FtsH
protease GI:13183728 from [Medicago sativa]
Length = 704
Score = 164 bits (399), Expect = 4e-41
Identities = 78/192 (40%), Positives = 114/192 (59%)
Frame = +2
Query: 2 PPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSASPCVLFFDE 181
PPG GKTLLA+A+A E F S E + ++ G + VRD+F+KA+S +PC++F DE
Sbjct: 291 PPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDE 350
Query: 182 LDSIAKXXXXXXXXXXXXXXXVINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGR 361
+D++ + INQ+LTEMDG V ++ ATNRPD++D A+LRPGR
Sbjct: 351 IDAVGRQRGAGMGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGR 410
Query: 362 LDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQGFSGADLTEICQRACKLA 541
D+ + + PD R IL+ + R I KDVD +A+ T GF+GADL + A LA
Sbjct: 411 FDRQVTVDRPDVAGRVQILKVHSRGKAIGKDVDYEKVARRTPGFTGADLQNLMNEAAILA 470
Query: 542 IRQAIEAEIHRE 577
R+ ++ EI ++
Sbjct: 471 ARRELK-EISKD 481
>At1g50250.1 68414.m05634 cell division protein ftsH homolog 1,
chloroplast (FTSH1) (FTSH) identical to SP:Q39102 Cell
division protein ftsH homolog 1, chloroplast
precursor (EC 3.4.24.-) [Arabidopsis thaliana]
Length = 716
Score = 163 bits (397), Expect = 8e-41
Identities = 77/192 (40%), Positives = 114/192 (59%)
Frame = +2
Query: 2 PPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSASPCVLFFDE 181
PPG GKTLLA+A+A E F S E + ++ G + VRD+F+KA+S +PC++F DE
Sbjct: 303 PPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDE 362
Query: 182 LDSIAKXXXXXXXXXXXXXXXVINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGR 361
+D++ + INQ+LTEMDG V ++ ATNRPD++D A+LRPGR
Sbjct: 363 IDAVGRQRGAGMGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGR 422
Query: 362 LDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQGFSGADLTEICQRACKLA 541
D+ + + PD R IL+ + R + KDVD +A+ T GF+GADL + A LA
Sbjct: 423 FDRQVTVDRPDVAGRVKILQVHSRGKALGKDVDFDKVARRTPGFTGADLQNLMNEAAILA 482
Query: 542 IRQAIEAEIHRE 577
R+ ++ EI ++
Sbjct: 483 ARRELK-EISKD 493
>At2g03670.1 68415.m00326 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family ('A'TPases
'A'ssociated with diverse cellular 'A'ctivities)
Length = 603
Score = 161 bits (392), Expect = 3e-40
Identities = 80/188 (42%), Positives = 118/188 (62%), Gaps = 1/188 (0%)
Frame = +2
Query: 2 PPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSASPCVLFFDE 181
PPGC KT LAKA AN QA+F S+ EL +M+ GE EA +R+ F +AR ASP ++FFDE
Sbjct: 328 PPGCSKTTLAKAAANAAQASFFSLSCAELFSMYVGEGEALLRNTFQRARLASPSIIFFDE 387
Query: 182 LDSIA-KXXXXXXXXXXXXXXXVINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPG 358
D +A K +++ +LTEMDG+ K + ++ ATNRP ID A++RPG
Sbjct: 388 ADVVACKRGDESSSNSSTVGERLLSTLLTEMDGLEEAKGILVLAATNRPYAIDAALMRPG 447
Query: 359 RLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQGFSGADLTEICQRACKL 538
R D ++Y+P PD ++R IL+ + R + DVDL IA+ T F+GA+L +C+ + +
Sbjct: 448 RFDLVLYVPPPDLEARFEILQVHTRNMTLGDDVDLRKIAEETDLFTGAELEGLCRESGTV 507
Query: 539 AIRQAIEA 562
++R+ I A
Sbjct: 508 SLRENIAA 515
Score = 101 bits (242), Expect = 5e-22
Identities = 64/196 (32%), Positives = 99/196 (50%), Gaps = 7/196 (3%)
Frame = +2
Query: 2 PPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSAS----PCVL 169
PPG GKT L +A+ EC A+ I + + GESE +R+ F +A S + P V+
Sbjct: 64 PPGTGKTSLVRAVVQECDAHLIVLSPHSVHRAHAGESEKVLREAFAEASSHAVSDKPSVI 123
Query: 170 FFDELDSIAKXXXXXXXXXXXXXXXVINQILTEMDG---MGAKKNVFIIGATNRPDIIDP 340
F DE+D + + +Q+ T MD + V ++ +TNR D IDP
Sbjct: 124 FIDEIDVLCPRRDARREQDVR----IASQLFTLMDSNKPSSSAPRVVVVASTNRVDAIDP 179
Query: 341 AILRPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQGFSGADLTEIC 520
A+ R GR D L+ + P+E+ R IL+ +K + VDL IA G+ GADL +C
Sbjct: 180 ALRRAGRFDALVEVSTPNEEDRLKILQLYTKKVNLDPSVDLQAIAISCNGYVGADLEALC 239
Query: 521 QRACKLAIRQAIEAEI 568
+ A A +++ ++ I
Sbjct: 240 REATISASKRSSDSLI 255
>At2g30950.1 68415.m03775 FtsH protease (VAR2) identical to zinc
dependent protease VAR2 GI:7650138 from [Arabidopsis
thaliana]
Length = 695
Score = 161 bits (391), Expect = 4e-40
Identities = 79/184 (42%), Positives = 106/184 (57%)
Frame = +2
Query: 2 PPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSASPCVLFFDE 181
PPG GKTLLAKAIA E F S+ G E + M+ G + VRD+F KA+ +PC++F DE
Sbjct: 268 PPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDE 327
Query: 182 LDSIAKXXXXXXXXXXXXXXXVINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGR 361
+D++ + +NQ+LTEMDG V ++ ATNR DI+D A+LRPGR
Sbjct: 328 IDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGVIVVAATNRADILDSALLRPGR 387
Query: 362 LDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQGFSGADLTEICQRACKLA 541
D+ + + +PD K R IL+ + DV L IA T GFSGADL + A LA
Sbjct: 388 FDRQVSVDVPDVKGRTDILKVHAGNKKFDNDVSLEIIAMRTPGFSGADLANLLNEAAILA 447
Query: 542 IRQA 553
R+A
Sbjct: 448 GRRA 451
>At3g47060.1 68416.m05110 FtsH protease, putative contains
similarity to FtsH protease GI:13183728 from [Medicago
sativa]
Length = 802
Score = 158 bits (384), Expect = 3e-39
Identities = 77/185 (41%), Positives = 114/185 (61%), Gaps = 3/185 (1%)
Frame = +2
Query: 5 PGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSASPCVLFFDEL 184
PG GKTLLAKA+A E + FIS E + ++ G + VRD+F +A+ +P ++F DE+
Sbjct: 367 PGTGKTLLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEI 426
Query: 185 DSIAKXXXXXXXXXXXXXXX-VINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGR 361
D++AK +NQ+LTEMDG + V ++GATNR D++DPA+ RPGR
Sbjct: 427 DAVAKSRDGKFRMGSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRADVLDPALRRPGR 486
Query: 362 LDQLIYIPLPDEKSREAILRANLRKS--PIAKDVDLSYIAKVTQGFSGADLTEICQRACK 535
D+++ + PD+ RE+ILR ++ K P+ DV+L IA +T GF+GADL + A
Sbjct: 487 FDRVVTVETPDKIGRESILRVHVSKKELPLGDDVNLGSIASMTTGFTGADLANLVNEAAL 546
Query: 536 LAIRQ 550
LA R+
Sbjct: 547 LAGRK 551
>At1g45000.1 68414.m05158 26S proteasome regulatory complex subunit
p42D, putative similar to 26S proteasome regulatory
complex subunit p42D [Drosophila melanogaster]
gi|6434958|gb|AAF08391
Length = 399
Score = 158 bits (383), Expect = 4e-39
Identities = 82/194 (42%), Positives = 117/194 (60%), Gaps = 2/194 (1%)
Frame = +2
Query: 2 PPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSASPCVLFFDE 181
PPG GKTLLA+AIA+ ANF+ V ++ + GES +R++F+ AR PC++F DE
Sbjct: 181 PPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDE 240
Query: 182 LDSIAKXXXXXXXXXXXXXXXVINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGR 361
+D+I + ++L ++DG V +I ATNRPD++DPA+LRPGR
Sbjct: 241 IDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGR 300
Query: 362 LDQLIYIPLPDEKSREAILRANLRKSPIAK--DVDLSYIAKVTQGFSGADLTEICQRACK 535
LD+ I IPLP+E+SR IL+ + S IAK ++D I K+ +GF+GADL IC A
Sbjct: 301 LDRKIEIPLPNEQSRMEILK--IHASGIAKHGEIDYEAIVKLGEGFNGADLRNICTEAGM 358
Query: 536 LAIRQAIEAEIHRE 577
AIR + IH +
Sbjct: 359 FAIRAERDYVIHED 372
>At1g06430.1 68414.m00680 FtsH protease, putative similar to zinc
dependent protease GI:7650138 from [Arabidopsis
thaliana]
Length = 685
Score = 157 bits (381), Expect = 7e-39
Identities = 79/192 (41%), Positives = 107/192 (55%)
Frame = +2
Query: 2 PPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSASPCVLFFDE 181
PPG GKTLLAKAIA E F S+ G E + M+ G + VRD+F KA+ +PC++F DE
Sbjct: 261 PPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDE 320
Query: 182 LDSIAKXXXXXXXXXXXXXXXVINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGR 361
+D++ + +NQ+LTEMDG V ++ ATNR DI+D A+LRPGR
Sbjct: 321 IDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGVIVVAATNRADILDSALLRPGR 380
Query: 362 LDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQGFSGADLTEICQRACKLA 541
D+ + + +PD K R IL+ + V L IA T GFSGADL + A LA
Sbjct: 381 FDRQVSVDVPDVKGRTDILKVHSGNKKFESGVSLEVIAMRTPGFSGADLANLLNEAAILA 440
Query: 542 IRQAIEAEIHRE 577
R+ A +E
Sbjct: 441 GRRGKTAISSKE 452
>At5g58870.1 68418.m07376 FtsH protease, putative contains
similarity to cell division protein FtsH homolog 3
SP:P73437 (EC 3.4.24.-) [strain PCC6803] {Synechocystis
sp.}
Length = 806
Score = 157 bits (380), Expect = 9e-39
Identities = 76/186 (40%), Positives = 115/186 (61%), Gaps = 3/186 (1%)
Frame = +2
Query: 5 PGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSASPCVLFFDEL 184
PG GKTLLAKA+A E FIS E + ++ G + VRD+F +A+ +P ++F DE+
Sbjct: 371 PGTGKTLLAKAVAGESDVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEI 430
Query: 185 DSIAKXXXXXXXXXXXXXXX-VINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGR 361
D++AK +NQ+LTEMDG + V ++GATNR D++DPA+ RPGR
Sbjct: 431 DAVAKSRDGKFRMVSNDEREQTLNQLLTEMDGFDSSSAVIVLGATNRADVLDPALRRPGR 490
Query: 362 LDQLIYIPLPDEKSREAILRANLRKS--PIAKDVDLSYIAKVTQGFSGADLTEICQRACK 535
D+++ + PD+ RE+IL+ ++ K P+ DV+L+ IA +T GF+GADL + A
Sbjct: 491 FDRVVTVESPDKVGRESILKVHVSKKELPLGDDVNLASIASMTTGFTGADLANLVNEAAL 550
Query: 536 LAIRQA 553
LA R++
Sbjct: 551 LAGRKS 556
>At5g43010.1 68418.m05245 26S proteasome AAA-ATPase subunit (RPT4a)
gb|AAF22524.1
Length = 399
Score = 157 bits (380), Expect = 9e-39
Identities = 81/194 (41%), Positives = 117/194 (60%), Gaps = 2/194 (1%)
Frame = +2
Query: 2 PPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSASPCVLFFDE 181
PPG GKTLLA+AIA+ ANF+ V ++ + GES +R++F+ AR PC++F DE
Sbjct: 181 PPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDE 240
Query: 182 LDSIAKXXXXXXXXXXXXXXXVINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGR 361
+D+I + ++L ++DG V +I ATNRPD++DPA+LRPGR
Sbjct: 241 IDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDNLGKVKMIMATNRPDVLDPALLRPGR 300
Query: 362 LDQLIYIPLPDEKSREAILRANLRKSPIAK--DVDLSYIAKVTQGFSGADLTEICQRACK 535
LD+ I IPLP+E+SR IL+ + + IAK ++D I K+ +GF+GADL IC A
Sbjct: 301 LDRKIEIPLPNEQSRMDILK--IHAAGIAKHGEIDYEAIVKLAEGFNGADLRNICTEAGM 358
Query: 536 LAIRQAIEAEIHRE 577
AIR + IH +
Sbjct: 359 FAIRAERDYVIHED 372
>At2g29080.1 68415.m03535 FtsH protease, putative similar to
AAA-metalloprotease FtsH [Pisum sativum] GI:15021761;
contains Pfam profiles PF01434: Peptidase family M41,
PF00004: ATPase AAA family
Length = 809
Score = 152 bits (368), Expect = 2e-37
Identities = 77/186 (41%), Positives = 108/186 (58%), Gaps = 4/186 (2%)
Frame = +2
Query: 2 PPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSASPCVLFFDE 181
PPG GKTLLAKA A E F+S+ G + + M+ G + VR +F +AR A+P ++F DE
Sbjct: 363 PPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRHLFQEARQAAPSIIFIDE 422
Query: 182 LDSIAKXXXXXXXXXXXXXXXVINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGR 361
+D+I + +NQ+L EMDG G V ++ TNRPDI+D A+LRPGR
Sbjct: 423 IDAIGRARGRGGLGGNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGR 482
Query: 362 LDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSY----IAKVTQGFSGADLTEICQRA 529
D+ I I PD K R+ I + L+K I D + SY +A +T GF+GAD+ +C A
Sbjct: 483 FDRQITIDKPDIKGRDQIFKIYLKK--IKLDHEPSYYSQRLAALTPGFAGADIANVCNEA 540
Query: 530 CKLAIR 547
+A R
Sbjct: 541 ALIAAR 546
>At3g16290.1 68416.m02056 FtsH protease, putative contains
similarity to cell division protein FtsH GI:1652085 from
[Synechocystis sp. PCC 6803]
Length = 876
Score = 149 bits (362), Expect = 1e-36
Identities = 70/176 (39%), Positives = 104/176 (59%)
Frame = +2
Query: 2 PPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSASPCVLFFDE 181
PPG GKTLLAKA+A E NF S+ + + ++ G + VR ++ +AR +P V+F DE
Sbjct: 451 PPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRALYQEARENAPSVVFIDE 510
Query: 182 LDSIAKXXXXXXXXXXXXXXXVINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGR 361
LD++ + +NQ+L +DG + V I +TNRPDI+DPA++RPGR
Sbjct: 511 LDAVGRERGLIKGSGGQERDATLNQLLVSLDGFEGRGEVITIASTNRPDILDPALVRPGR 570
Query: 362 LDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQGFSGADLTEICQRA 529
D+ I+IP P R IL+ + RK P+A+D+D +A +T G GA+L I + A
Sbjct: 571 FDRKIFIPKPGLIGRMEILQVHARKKPMAEDLDYMAVASMTDGMVGAELANIVEIA 626
>At3g05530.1 68416.m00606 26S proteasome AAA-ATPase subunit (RPT5a)
identical to GB:AAF22525 GI:6652886 from [Arabidopsis
thaliana]
Length = 424
Score = 148 bits (358), Expect = 4e-36
Identities = 69/183 (37%), Positives = 109/183 (59%)
Frame = +2
Query: 2 PPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSASPCVLFFDE 181
PPG GKTL+A+A A + A F+ + GP+L+ M+ G+ VRD F A+ +PC++F DE
Sbjct: 213 PPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKAPCIIFIDE 272
Query: 182 LDSIAKXXXXXXXXXXXXXXXVINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGR 361
+D+I + ++L ++DG + + + +I ATNR DI+DPA++R GR
Sbjct: 273 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDERIKVIAATNRADILDPALMRSGR 332
Query: 362 LDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQGFSGADLTEICQRACKLA 541
LD+ I P P E++R IL+ + RK + DV+ +A+ T F+GA L +C A LA
Sbjct: 333 LDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLA 392
Query: 542 IRQ 550
+R+
Sbjct: 393 LRR 395
>At1g53750.1 68414.m06115 26S proteasome AAA-ATPase subunit (RPT1a)
similar to 26S proteasome ATPase subunit GI:1395190 from
[Spinacia oleracea]
Length = 426
Score = 147 bits (357), Expect = 5e-36
Identities = 72/182 (39%), Positives = 106/182 (58%)
Frame = +2
Query: 2 PPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSASPCVLFFDE 181
PPG GKTLLA+A+AN A FI V G EL+ + GE VR++F ARS C++FFDE
Sbjct: 210 PPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDE 269
Query: 182 LDSIAKXXXXXXXXXXXXXXXVINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGR 361
+D+I + +I+ ++DG A+ N+ ++ ATNRPD +DPA+LRPGR
Sbjct: 270 VDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGR 329
Query: 362 LDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQGFSGADLTEICQRACKLA 541
LD+ + LPD +SR I + + R +D+ +A++ +GAD+ +C A A
Sbjct: 330 LDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYA 389
Query: 542 IR 547
IR
Sbjct: 390 IR 391
>At1g07510.1 68414.m00804 FtsH protease, putative similar to
AAA-metalloprotease FtsH [Pisum sativum] GI:15021761;
contains Pfam profiles PF01434: Peptidase family M41,
PF00004: ATPase AAA family
Length = 813
Score = 146 bits (355), Expect = 9e-36
Identities = 76/187 (40%), Positives = 108/187 (57%), Gaps = 5/187 (2%)
Frame = +2
Query: 2 PPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSASPCVLFFDE 181
PPG GKTLLAKA A E F+S+ G + + M+ G + VR++F +AR +P ++F DE
Sbjct: 368 PPGTGKTLLAKATAGESAVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDE 427
Query: 182 LDSIAKXXXXXXXXXXXXXXX-VINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPG 358
+D+I + +NQ+L EMDG G V ++ TNRPDI+D A+LRPG
Sbjct: 428 IDAIGRARGRGGFSGGNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPG 487
Query: 359 RLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSY----IAKVTQGFSGADLTEICQR 526
R D+ I I PD K R+ I + L+K I D + SY +A +T GF+GAD+ +C
Sbjct: 488 RFDRQITIDKPDIKGRDQIFQIYLKK--IKLDHEPSYYSQRLAALTPGFAGADIANVCNE 545
Query: 527 ACKLAIR 547
A +A R
Sbjct: 546 AALIAAR 552
>At3g02450.1 68416.m00232 cell division protein ftsH, putative
similar to SWISS-PROT:P46469 cell division protein ftsH
homolog [Lactococcus lactis]; contains Pfam domain,
PF00004: ATPase, AAA family ('A'TPases 'A'ssociated with
diverse cellular 'A'ctivities)
Length = 622
Score = 146 bits (354), Expect = 1e-35
Identities = 76/189 (40%), Positives = 106/189 (56%), Gaps = 2/189 (1%)
Frame = +2
Query: 2 PPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSASPCVLFFDE 181
PPG GKTLLA+A+A E F SV E + ++ G A +RD+F+ AR SP ++F DE
Sbjct: 375 PPGTGKTLLARAVAGEAGVPFFSVSASEFVELFVGRGAARIRDLFNAARKNSPSIIFIDE 434
Query: 182 LDSIAKXXXXXXXXXXXXXXXVINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGR 361
LD++ +NQ+LTEMDG + V +I ATNRP+ +D A+ RPGR
Sbjct: 435 LDAVG---GKRGRSFNDERDQTLNQLLTEMDGFESDTKVIVIAATNRPEALDSALCRPGR 491
Query: 362 LDQLIYIPLPDEKSREAILRANLRKSPIAKDVDL--SYIAKVTQGFSGADLTEICQRACK 535
+ + + PD++ R IL +LR P+ +D L +A +T GF GADL I A
Sbjct: 492 FSRKVLVAEPDQEGRRKILAIHLRDVPLEEDAFLICDLVASLTPGFVGADLANIVNEAAL 551
Query: 536 LAIRQAIEA 562
LA R+ EA
Sbjct: 552 LAARRGGEA 560
>At1g09100.1 68414.m01016 26S protease regulatory subunit 6A,
putative identical to SP:O04019 from [Arabidopsis
thaliana]
Length = 423
Score = 146 bits (354), Expect = 1e-35
Identities = 70/183 (38%), Positives = 108/183 (59%)
Frame = +2
Query: 2 PPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSASPCVLFFDE 181
PPG GKTL+A+A A + A F+ + GP+L+ M+ G+ VRD F A+ SPC++F DE
Sbjct: 212 PPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFLLAKEKSPCIIFIDE 271
Query: 182 LDSIAKXXXXXXXXXXXXXXXVINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGR 361
+D+I + ++L ++DG + + +I ATNR DI+DPA++R GR
Sbjct: 272 IDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGR 331
Query: 362 LDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQGFSGADLTEICQRACKLA 541
LD+ I P P E++R IL+ + RK + DV+ +A+ T F+GA L +C A LA
Sbjct: 332 LDRKIEFPHPTEEARGRILQIHSRKMNVNADVNFEELARSTDDFNGAQLKAVCVEAGMLA 391
Query: 542 IRQ 550
+R+
Sbjct: 392 LRR 394
>At5g53170.1 68418.m06610 FtsH protease, putative similar to
ATP-dependent metalloprotease FtsH1 GI:3600100 from [Mus
musculus]
Length = 806
Score = 145 bits (351), Expect = 3e-35
Identities = 75/185 (40%), Positives = 106/185 (57%)
Frame = +2
Query: 5 PGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSASPCVLFFDEL 184
PG GKTLLAKAIA E F G E M+ G VR +F A+ +PC++F DE+
Sbjct: 404 PGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEI 463
Query: 185 DSIAKXXXXXXXXXXXXXXXVINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRL 364
D++ ++Q+L EMDG + + ++ ATN PDI+DPA+ RPGR
Sbjct: 464 DAVGSTRKQWEGHTKK----TLHQLLVEMDGFEQNEGIIVMAATNLPDILDPALTRPGRF 519
Query: 365 DQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQGFSGADLTEICQRACKLAI 544
D+ I +P PD + RE IL L+ P+++DVD+ IA+ T GF+GADL + A AI
Sbjct: 520 DRHIVVPSPDVRGREEILELYLQGKPMSEDVDVKAIARGTPGFNGADLANLVNIA---AI 576
Query: 545 RQAIE 559
+ A+E
Sbjct: 577 KAAVE 581
>At1g80350.1 68414.m09406 katanin 1 (KTN1) identical to katanin 1
(KTN1) [Arabidopsis thaliana] GI:14133602
Length = 523
Score = 144 bits (349), Expect = 5e-35
Identities = 80/200 (40%), Positives = 118/200 (59%), Gaps = 8/200 (4%)
Frame = +2
Query: 2 PPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSASPCVLFFDE 181
PPG GKTLLAKA+A EC F +V L + W GESE VR +FD AR+ +P +F DE
Sbjct: 280 PPGTGKTLLAKAVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDE 339
Query: 182 LDSIAKXXXXXXXXXXXXXXXVINQILTEMDGM--------GAKKNVFIIGATNRPDIID 337
+DS+ V +++L ++DG+ G++K V ++ ATN P ID
Sbjct: 340 IDSLCN--SRGGSGEHESSRRVKSELLVQVDGVSNTATNEDGSRKIVMVLAATNFPWDID 397
Query: 338 PAILRPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQGFSGADLTEI 517
A+ R RL++ IYIPLPD +SR+A++ NLR +A DV++ +A+ T+G+SG DLT +
Sbjct: 398 EALRR--RLEKRIYIPLPDFESRKALININLRTVEVASDVNIEDVARRTEGYSGDDLTNV 455
Query: 518 CQRACKLAIRQAIEAEIHRE 577
C+ A +R+ I + E
Sbjct: 456 CRDASMNGMRRKIAGKTRDE 475
>At1g53780.1 68414.m06120 26S proteasome AAA-ATPase subunit,
putative similar to 26S proteasome AAA-ATPase subunit
RPT1 SP:Q41365 from [Spinacia oleracea]
Length = 464
Score = 144 bits (349), Expect = 5e-35
Identities = 72/181 (39%), Positives = 104/181 (57%)
Frame = +2
Query: 2 PPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSASPCVLFFDE 181
PPG GKTL+A+A+AN A FI V G EL+ + GE VR++F ARS C+LFFDE
Sbjct: 247 PPGSGKTLVARAVANRTGACFIRVVGSELVQKYIGEGARMVRELFQMARSKKACILFFDE 306
Query: 182 LDSIAKXXXXXXXXXXXXXXXVINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGR 361
+D+I + +IL ++DG A+ N+ ++ ATNRPDI+DPA+LRPGR
Sbjct: 307 IDAIGGARFDDGVGSDNEVQRTMLEILYQLDGFDARGNIKVLMATNRPDILDPALLRPGR 366
Query: 362 LDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQGFSGADLTEICQRACKLA 541
LD+ + LPD + R I + + R +D+ +A + +GAD+ +C A A
Sbjct: 367 LDRKVEFCLPDLEGRTQIFKIHTRTMSCERDIRFELLAGLCPNSTGADIRSVCIEAGMYA 426
Query: 542 I 544
I
Sbjct: 427 I 427
>At2g26140.1 68415.m03137 FtsH protease, putative contains
similarity to YME1 GI:295582, a member of the
ftsH-SEC18-PAS1-CDC48 family of putative ATPase-encoding
genes from [Saccharomyces cerevisiae]
Length = 717
Score = 143 bits (347), Expect = 9e-35
Identities = 71/172 (41%), Positives = 100/172 (58%)
Frame = +2
Query: 2 PPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSASPCVLFFDE 181
PPG GKT+LA+AIA E F S G E M+ G VRD+F A+ SPC++F DE
Sbjct: 268 PPGTGKTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKCSPCIIFIDE 327
Query: 182 LDSIAKXXXXXXXXXXXXXXXVINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGR 361
+D+I +NQ+L E+DG + + ++ ATN P+ +D A++RPGR
Sbjct: 328 IDAIG---GSRNPKDQQYMKMTLNQMLVELDGFKQNEGIIVVAATNFPESLDKALVRPGR 384
Query: 362 LDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQGFSGADLTEI 517
D+ I +P PD + R IL +++ K A+DVDL IA+ T GFSGADL +
Sbjct: 385 FDRHIVVPNPDVEGRRQILESHMSKVLKAEDVDLMIIARGTPGFSGADLANL 436
>At5g58290.1 68418.m07297 26S proteasome AAA-ATPase subunit (RPT3)
identical to 26S proteasome AAA-ATPase subunit RPT3
GI:6652882 from [Arabidopsis thaliana]
Length = 408
Score = 142 bits (344), Expect = 2e-34
Identities = 71/183 (38%), Positives = 102/183 (55%)
Frame = +2
Query: 2 PPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSASPCVLFFDE 181
PPG GKT+LAKA+AN A FI V G E + + GE VRD+F A+ +P ++F DE
Sbjct: 197 PPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDE 256
Query: 182 LDSIAKXXXXXXXXXXXXXXXVINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGR 361
+D+IA ++ ++L +MDG NV +I ATNR D +DPA+LRPGR
Sbjct: 257 VDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGR 316
Query: 362 LDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQGFSGADLTEICQRACKLA 541
LD+ I PLPD + + + + K ++ +VDL S A++ ICQ A A
Sbjct: 317 LDRKIEFPLPDRRQKRLVFQVCTSKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHA 376
Query: 542 IRQ 550
+R+
Sbjct: 377 VRK 379
>At2g20140.1 68415.m02353 26S protease regulatory complex subunit 4,
putative similar to Swiss-Prot:P48601 26S protease
regulatory subunit 4 (P26S4) [Drosophila melanogaster]
Length = 443
Score = 142 bits (344), Expect = 2e-34
Identities = 71/182 (39%), Positives = 106/182 (58%)
Frame = +2
Query: 5 PGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSASPCVLFFDEL 184
PG GKTLLAKA+AN A F+ V G EL+ + G+ VR++F A SP ++F DE+
Sbjct: 231 PGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEI 290
Query: 185 DSIAKXXXXXXXXXXXXXXXVINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRL 364
D++ + ++L ++DG ++ +V +I ATNR + +DPA+LRPGR+
Sbjct: 291 DAVGTKRYDANSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRI 350
Query: 365 DQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQGFSGADLTEICQRACKLAI 544
D+ I PLPD K+R I + + K +A+DV+L FSGAD+ IC A LA+
Sbjct: 351 DRKIEFPLPDIKTRRRIFQIHTSKMTLAEDVNLEEFVMTKDEFSGADIKAICTEAGLLAL 410
Query: 545 RQ 550
R+
Sbjct: 411 RE 412
>At5g20000.1 68418.m02380 26S proteasome AAA-ATPase subunit,
putative almost identical to 26S proteasome AAA-ATPase
subunit RPT6a GI:6652888 from [Arabidopsis thaliana];
almost identical to a member of conserved Sug1 CAD
family AtSUG1 GI:13537115 from [Arabidopsis thaliana]
Length = 419
Score = 141 bits (341), Expect = 5e-34
Identities = 72/184 (39%), Positives = 107/184 (58%), Gaps = 1/184 (0%)
Frame = +2
Query: 2 PPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSASPCVLFFDE 181
PPG GKTLLA+A+A+ FI V G EL+ + GE VR++F AR +P ++F DE
Sbjct: 203 PPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDE 262
Query: 182 LDSIAKXXXXXXXXXXXXXXX-VINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPG 358
+DSI + ++L ++DG A + ++ ATNR DI+D A+LRPG
Sbjct: 263 IDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPG 322
Query: 359 RLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQGFSGADLTEICQRACKL 538
R+D+ I P P+E+SR IL+ + RK + + +DL IA+ G SGA+L +C A
Sbjct: 323 RIDRKIEFPNPNEESRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMF 382
Query: 539 AIRQ 550
A+R+
Sbjct: 383 ALRE 386
>At5g19990.1 68418.m02379 26S proteasome AAA-ATPase subunit (RPT6a)
Length = 419
Score = 141 bits (341), Expect = 5e-34
Identities = 72/184 (39%), Positives = 107/184 (58%), Gaps = 1/184 (0%)
Frame = +2
Query: 2 PPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSASPCVLFFDE 181
PPG GKTLLA+A+A+ FI V G EL+ + GE VR++F AR +P ++F DE
Sbjct: 203 PPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDE 262
Query: 182 LDSIAKXXXXXXXXXXXXXXX-VINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPG 358
+DSI + ++L ++DG A + ++ ATNR DI+D A+LRPG
Sbjct: 263 IDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPG 322
Query: 359 RLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQGFSGADLTEICQRACKL 538
R+D+ I P P+E+SR IL+ + RK + + +DL IA+ G SGA+L +C A
Sbjct: 323 RIDRKIEFPNPNEESRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMF 382
Query: 539 AIRQ 550
A+R+
Sbjct: 383 ALRE 386
>At4g29040.1 68417.m04153 26S proteasome AAA-ATPase subunit (RPT2a)
almost identical to 26S proteasome AAA-ATPase subunit
RPT2a (GI:6652880) {Arabidopsis thaliana}; Drosophila
melanogaster 26S proteasome subunit 4 ATPase,
PID:g1066065
Length = 443
Score = 141 bits (341), Expect = 5e-34
Identities = 70/182 (38%), Positives = 106/182 (58%)
Frame = +2
Query: 5 PGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSASPCVLFFDEL 184
PG GKTLLAKA+AN A F+ V G EL+ + G+ VR++F A SP ++F DE+
Sbjct: 231 PGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEI 290
Query: 185 DSIAKXXXXXXXXXXXXXXXVINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRL 364
D++ + ++L ++DG ++ +V +I ATNR + +DPA+LRPGR+
Sbjct: 291 DAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRI 350
Query: 365 DQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQGFSGADLTEICQRACKLAI 544
D+ I PLPD K+R I + + K +++DV+L FSGAD+ IC A LA+
Sbjct: 351 DRKIEFPLPDIKTRRRIFQIHTSKMTLSEDVNLEEFVMTKDEFSGADIKAICTEAGLLAL 410
Query: 545 RQ 550
R+
Sbjct: 411 RE 412
>At4g23940.1 68417.m03443 FtsH protease, putative contains similarity
to zinc dependent protease GI:7650138 from [Arabidopsis
thaliana]
Length = 946
Score = 140 bits (338), Expect = 1e-33
Identities = 74/191 (38%), Positives = 107/191 (56%), Gaps = 8/191 (4%)
Frame = +2
Query: 2 PPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSASPCVLFFDE 181
PPGCGKTL+AKAIA E F + G E + + G A +RD+F +A+ P V+F DE
Sbjct: 471 PPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDE 530
Query: 182 LDSIA--------KXXXXXXXXXXXXXXXVINQILTEMDGMGAKKNVFIIGATNRPDIID 337
+D++A + +NQ+L E+DG K V +GATNR D++D
Sbjct: 531 IDALATRRQGIFKENSDQLYNAATQERETTLNQLLIELDGFDTGKGVIFLGATNRRDLLD 590
Query: 338 PAILRPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQGFSGADLTEI 517
PA+LRPGR D+ I + P+ K R IL+ + K ++ VDLS A G+SGA L ++
Sbjct: 591 PALLRPGRFDRKIRVRPPNAKGRLDILKIHASKVKMSDSVDLSSYASNLPGWSGAKLAQL 650
Query: 518 CQRACKLAIRQ 550
Q A +A+R+
Sbjct: 651 VQEAALVAVRK 661
>At1g02890.1 68414.m00256 AAA-type ATPase family protein contains Pfam
domain, PF00004: ATPase, AAA family; similar to
mitochondrial sorting protein 1 (MSP1) (TAT-binding
homolog 4) (Swiss-Prot:P28737) [Saccharomyces cerevisiae]
Length = 1252
Score = 139 bits (337), Expect = 1e-33
Identities = 77/196 (39%), Positives = 112/196 (57%), Gaps = 2/196 (1%)
Frame = +2
Query: 2 PPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSASPCVLFFDE 181
PPG GKT+LAKA+A E ANFI++ + + WFGE E V+ +F A +P V+F DE
Sbjct: 993 PPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDE 1052
Query: 182 LDSIAKXXXXXXXXXXXXXXXVINQILTEMDGMGA--KKNVFIIGATNRPDIIDPAILRP 355
+DS+ + N+ + DG+ K+ V ++ ATNRP +D A++R
Sbjct: 1053 VDSM--LGRRENPGEHEAMRKMKNEFMINWDGLRTKDKERVLVLAATNRPFDLDEAVIR- 1109
Query: 356 GRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQGFSGADLTEICQRACK 535
RL + + + LPD +R IL L K +A+DVDL IA +T G+SG+DL +C A
Sbjct: 1110 -RLPRRLMVNLPDSANRSKILSVILAKEEMAEDVDLEAIANMTDGYSGSDLKNLCVTAAH 1168
Query: 536 LAIRQAIEAEIHRERS 583
L IR+ +E E +ERS
Sbjct: 1169 LPIREILEKE-KKERS 1183
>At4g02480.1 68417.m00335 AAA-type ATPase family protein contains Pfam
domain, PF00004: ATPase, AAA family; similar to Spastin
(Swiss-Prot:Q9UBP0) [Homo sapiens] and Spastin (Fragment)
(Swiss-Prot:Q9QYY8) [Mus musculus]; similar to
mitochondrial sorting protein 1 (MSP1) protein
(TAT-binding homolog 4) (Swiss-Prot:P28737)
[Saccharomyces cerevisiae]
Length = 1265
Score = 136 bits (330), Expect = 1e-32
Identities = 74/190 (38%), Positives = 106/190 (55%), Gaps = 2/190 (1%)
Frame = +2
Query: 2 PPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSASPCVLFFDE 181
PPG GKT+LAKA+A E ANFI++ + + WFGE E V+ +F A +P V+F DE
Sbjct: 1006 PPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDE 1065
Query: 182 LDSIAKXXXXXXXXXXXXXXXVINQILTEMDGMGAK--KNVFIIGATNRPDIIDPAILRP 355
+DS+ + N+ + DG+ K + V ++ ATNRP +D A++R
Sbjct: 1066 VDSM--LGRRENPGEHEAMRKMKNEFMVNWDGLRTKDRERVLVLAATNRPFDLDEAVIR- 1122
Query: 356 GRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQGFSGADLTEICQRACK 535
RL + + + LPD +R IL L K IA DVDL IA +T G+SG+DL +C A
Sbjct: 1123 -RLPRRLMVNLPDATNRSKILSVILAKEEIAPDVDLEAIANMTDGYSGSDLKNLCVTAAH 1181
Query: 536 LAIRQAIEAE 565
IR+ +E E
Sbjct: 1182 FPIREILEKE 1191
>At4g28000.1 68417.m04016 AAA-type ATPase family protein contains Pfam
domain, PF00004: ATPase, AAA family
Length = 726
Score = 134 bits (325), Expect = 4e-32
Identities = 74/197 (37%), Positives = 112/197 (56%), Gaps = 2/197 (1%)
Frame = +2
Query: 2 PPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSASPCVLFFDE 181
PPG GKT++AKAIANE A+FI+V + + WFGE E NVR +F A SP ++F DE
Sbjct: 456 PPGTGKTMMAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDE 515
Query: 182 LDSIAKXXXXXXXXXXXXXXXVINQILTEMDGM--GAKKNVFIIGATNRPDIIDPAILRP 355
+DS+ + N+ +T DG+ A + ++ ATNRP +D AI+R
Sbjct: 516 VDSM--LGQRTRVGEHEAMRKIKNEFMTHWDGLMSNAGDRILVLAATNRPFDLDEAIIR- 572
Query: 356 GRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQGFSGADLTEICQRACK 535
R ++ I + LP +SRE ILR L K +++D +A++T G+SG+DL C A
Sbjct: 573 -RFERRIMVGLPSVESREKILRTLLSKEK-TENLDFQELAQMTDGYSGSDLKNFCTTAAY 630
Query: 536 LAIRQAIEAEIHRERSR 586
+R+ I+ E +++ R
Sbjct: 631 RPVRELIKQECLKDQER 647
>At4g24860.1 68417.m03559 AAA-type ATPase family protein contains Pfam
profile PF00004: ATPase, AAA family
Length = 1122
Score = 134 bits (323), Expect = 7e-32
Identities = 72/195 (36%), Positives = 110/195 (56%), Gaps = 2/195 (1%)
Frame = +2
Query: 2 PPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSASPCVLFFDE 181
PPG GKT+LAKA+A E ANFI++ + + WFGE E V+ +F A SP V+F DE
Sbjct: 863 PPGTGKTMLAKAVAKEADANFINISMSSITSKWFGEGEKYVKAVFSLASKMSPSVIFVDE 922
Query: 182 LDSIAKXXXXXXXXXXXXXXXVINQILTEMDGMGA--KKNVFIIGATNRPDIIDPAILRP 355
+DS+ + N+ + DG+ ++ V ++ ATNRP +D A++R
Sbjct: 923 VDSM--LGRREHPREHEASRKIKNEFMMHWDGLTTQERERVLVLAATNRPFDLDEAVIR- 979
Query: 356 GRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQGFSGADLTEICQRACK 535
RL + + + LPD +R IL+ L K ++ D+D+ IA +T G+SG+DL +C A
Sbjct: 980 -RLPRRLMVGLPDTSNRAFILKVILAKEDLSPDLDIGEIASMTNGYSGSDLKNLCVTAAH 1038
Query: 536 LAIRQAIEAEIHRER 580
I++ +E E RER
Sbjct: 1039 RPIKEILEKE-KRER 1052
>At2g45500.1 68415.m05659 AAA-type ATPase family protein similar to
SP|Q9QYY8 Spastin (Fragment) {Mus musculus}; contains
Pfam profiles PF00004: ATPase AAA family, PF04212: MIT
domain
Length = 487
Score = 133 bits (321), Expect = 1e-31
Identities = 73/186 (39%), Positives = 108/186 (58%), Gaps = 3/186 (1%)
Frame = +2
Query: 2 PPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSASPCVLFFDE 181
PPG GKT+LAKA+A+E QA F +V L + W GE+E V+ +F A S P V+F DE
Sbjct: 257 PPGNGKTMLAKAVASESQATFFNVSASSLTSKWVGEAEKLVKTLFQVAISRQPSVIFMDE 316
Query: 182 LDSIAKXXXXXXXXXXXXXXXVINQILTEMDGMGAKKN--VFIIGATNRPDIIDPAILRP 355
+DSI + ++ L + DG+ + + V IIGATN+P +D A+LR
Sbjct: 317 IDSIMS---TRSTSENEASRRLKSEFLIQFDGVTSNPDDLVIIIGATNKPQELDDAVLR- 372
Query: 356 GRLDQLIYIPLPDEKSREAILRANLRKSPIA-KDVDLSYIAKVTQGFSGADLTEICQRAC 532
RL + IY+PLPD R+ + + L+ P + D D+ I K T+G+SG+DL +C+ A
Sbjct: 373 -RLVKRIYVPLPDSNVRKLLFKTKLKCQPHSLSDGDIDKIVKETEGYSGSDLQALCEEAA 431
Query: 533 KLAIRQ 550
+ IR+
Sbjct: 432 MMPIRE 437
>At1g64110.2 68414.m07264 AAA-type ATPase family protein contains Pfam
domain, PF00004: ATPase, AAA family
Length = 829
Score = 132 bits (319), Expect = 2e-31
Identities = 70/190 (36%), Positives = 110/190 (57%), Gaps = 2/190 (1%)
Frame = +2
Query: 2 PPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSASPCVLFFDE 181
PPG GKT+LAKAIA E A+FI+V + + WFGE E NVR +F A SP ++F DE
Sbjct: 563 PPGTGKTMLAKAIAKEAGASFINVSMSTITSKWFGEDEKNVRALFTLASKVSPTIIFVDE 622
Query: 182 LDSIAKXXXXXXXXXXXXXXXVINQILTEMDGMGAK--KNVFIIGATNRPDIIDPAILRP 355
+DS+ + N+ ++ DG+ K + + ++ ATNRP +D AI+R
Sbjct: 623 VDSM--LGQRTRVGEHEAMRKIKNEFMSHWDGLMTKPGERILVLAATNRPFDLDEAIIR- 679
Query: 356 GRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQGFSGADLTEICQRACK 535
R ++ I + LP ++RE ILR L K + +++D +A +T+G++G+DL +C A
Sbjct: 680 -RFERRIMVGLPAVENREKILRTLLAKEKVDENLDYKELAMMTEGYTGSDLKNLCTTAAY 738
Query: 536 LAIRQAIEAE 565
+R+ I+ E
Sbjct: 739 RPVRELIQQE 748
>At1g64110.1 68414.m07263 AAA-type ATPase family protein contains Pfam
domain, PF00004: ATPase, AAA family
Length = 824
Score = 132 bits (319), Expect = 2e-31
Identities = 70/190 (36%), Positives = 110/190 (57%), Gaps = 2/190 (1%)
Frame = +2
Query: 2 PPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSASPCVLFFDE 181
PPG GKT+LAKAIA E A+FI+V + + WFGE E NVR +F A SP ++F DE
Sbjct: 558 PPGTGKTMLAKAIAKEAGASFINVSMSTITSKWFGEDEKNVRALFTLASKVSPTIIFVDE 617
Query: 182 LDSIAKXXXXXXXXXXXXXXXVINQILTEMDGMGAK--KNVFIIGATNRPDIIDPAILRP 355
+DS+ + N+ ++ DG+ K + + ++ ATNRP +D AI+R
Sbjct: 618 VDSM--LGQRTRVGEHEAMRKIKNEFMSHWDGLMTKPGERILVLAATNRPFDLDEAIIR- 674
Query: 356 GRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQGFSGADLTEICQRACK 535
R ++ I + LP ++RE ILR L K + +++D +A +T+G++G+DL +C A
Sbjct: 675 -RFERRIMVGLPAVENREKILRTLLAKEKVDENLDYKELAMMTEGYTGSDLKNLCTTAAY 733
Query: 536 LAIRQAIEAE 565
+R+ I+ E
Sbjct: 734 RPVRELIQQE 743
>At5g64580.1 68418.m08116 AAA-type ATPase family protein similar to
zinc dependent protease [Arabidopsis thaliana]
GI:7650138; contains Pfam profile PF00004: ATPase AAA
family
Length = 855
Score = 131 bits (317), Expect = 4e-31
Identities = 75/192 (39%), Positives = 111/192 (57%), Gaps = 6/192 (3%)
Frame = +2
Query: 2 PPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSASPCVLFFDE 181
PPG GKTLLAKAIA E F + G + + M+ G + + V+D+F +RS +P ++F DE
Sbjct: 357 PPGTGKTLLAKAIAGEAGLPFFAANGTDFVEMFVGVAASRVKDLFASSRSYAPSIIFIDE 416
Query: 182 LDSI-AKXXXXXXXXXXXXXXXVINQILTEMDGMG-AKKNVFIIGATNRPDIIDPAILRP 355
+D+I +K + QILTEMDG V +IGATNR DI+DPA+LR
Sbjct: 417 IDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVTTSQVLVIGATNRLDILDPALLRK 476
Query: 356 GRLDQLIYIPLPDEKSREAILRANLR----KSPIAKDVDLSYIAKVTQGFSGADLTEICQ 523
GR D++I + LP + R AIL+ + R +S K+ L +A+ T+ F+GA+L +
Sbjct: 477 GRFDKIIRVGLPSKDGRLAILKVHARNKFFRSEDEKEELLQEVAENTEDFTGAELQNVLN 536
Query: 524 RACKLAIRQAIE 559
A L R+ ++
Sbjct: 537 EAGILTARKDLD 548
>At1g50140.1 68414.m05623 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 640
Score = 130 bits (315), Expect = 7e-31
Identities = 69/190 (36%), Positives = 108/190 (56%), Gaps = 2/190 (1%)
Frame = +2
Query: 2 PPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSASPCVLFFDE 181
PPG GKTLLAKA+A E ANFIS+ G L + WFG++E + +F A +P ++F DE
Sbjct: 394 PPGTGKTLLAKALATEAGANFISITGSTLTSKWFGDAEKLTKALFSFATKLAPVIIFVDE 453
Query: 182 LDSIAKXXXXXXXXXXXXXXXVINQILTEMDGMGAK--KNVFIIGATNRPDIIDPAILRP 355
+DS+ + N+ + DG+ +K + + I+GATNRP +D A++R
Sbjct: 454 IDSL--LGARGGSSEHEATRRMRNEFMAAWDGLRSKDSQRILILGATNRPFDLDDAVIR- 510
Query: 356 GRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQGFSGADLTEICQRACK 535
RL + IY+ LPD ++R IL+ L + D +AK T+G+SG+DL +C A
Sbjct: 511 -RLPRRIYVDLPDAENRLKILKIFLTPENLESDFQFEKLAKETEGYSGSDLKNLCIAAAY 569
Query: 536 LAIRQAIEAE 565
+++ ++ E
Sbjct: 570 RPVQELLQEE 579
>At3g19740.1 68416.m02499 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 439
Score = 128 bits (308), Expect = 5e-30
Identities = 68/190 (35%), Positives = 108/190 (56%), Gaps = 2/190 (1%)
Frame = +2
Query: 2 PPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSASPCVLFFDE 181
PPG GKTLLAKA+A E ANFIS+ G L + WFG++E + +F A +P ++F DE
Sbjct: 193 PPGTGKTLLAKALATEAGANFISITGSTLTSKWFGDAEKLTKALFSFASKLAPVIIFVDE 252
Query: 182 LDSIAKXXXXXXXXXXXXXXXVINQILTEMDGMGAK--KNVFIIGATNRPDIIDPAILRP 355
+DS+ + N+ + DG+ +K + + I+GATNRP +D A++R
Sbjct: 253 VDSL--LGARGGAFEHEATRRMRNEFMAAWDGLRSKDSQRILILGATNRPFDLDDAVIR- 309
Query: 356 GRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQGFSGADLTEICQRACK 535
RL + IY+ LPD ++R IL+ L + + +AK T+G+SG+DL +C A
Sbjct: 310 -RLPRRIYVDLPDAENRLKILKIFLTPENLETGFEFDKLAKETEGYSGSDLKNLCIAAAY 368
Query: 536 LAIRQAIEAE 565
+++ ++ E
Sbjct: 369 RPVQELLQEE 378
>At4g27680.1 68417.m03980 MSP1 protein, putative /
intramitochondrial sorting protein, putative similar to
Swiss-Prot:P28737 MSP1 protein (TAT-binding homolog 4)
[Saccharomyces cerevisiae]; contains Pfam domain,
PF00004: ATPase, AAA family
Length = 398
Score = 126 bits (304), Expect = 1e-29
Identities = 66/190 (34%), Positives = 106/190 (55%), Gaps = 2/190 (1%)
Frame = +2
Query: 2 PPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSASPCVLFFDE 181
PPG GKT+LAKAIA E A FI+V+ L++ WFG+++ V +F A P ++F DE
Sbjct: 127 PPGTGKTMLAKAIAKESGAVFINVRVSNLMSKWFGDAQKLVSAVFSLAYKLQPAIIFIDE 186
Query: 182 LDSIAKXXXXXXXXXXXXXXXVINQILTEMDGMGAKKN--VFIIGATNRPDIIDPAILRP 355
++S + + + DG + V ++ ATNRP +D AILR
Sbjct: 187 VESF---LGQRRSTDHEAMANMKTEFMALWDGFSTDPHARVMVLAATNRPSELDEAILR- 242
Query: 356 GRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQGFSGADLTEICQRACK 535
RL Q I +PD + R IL+ L+ + D+D +IA++ +G++G+D+ E+C++A
Sbjct: 243 -RLPQAFEIGIPDRRERAEILKVTLKGERVEPDIDFDHIARLCEGYTGSDIFELCKKAAY 301
Query: 536 LAIRQAIEAE 565
IR+ ++AE
Sbjct: 302 FPIREILDAE 311
>At3g15120.1 68416.m01913 AAA-type ATPase family protein contains
PROSITE domains, PS00674: AAA-protein family signature
and PS00017: ATP/GTP-binding site motif A (P-loop)
Length = 1954
Score = 124 bits (300), Expect = 4e-29
Identities = 69/189 (36%), Positives = 107/189 (56%), Gaps = 6/189 (3%)
Frame = +2
Query: 5 PGCGKTLLAKA-IANECQAN----FISVKGPELLTMWFGESEANVRDIFDKARSASPCVL 169
PG GKTL+ +A I + + N + + KG + L + G++E +R +F A P ++
Sbjct: 762 PGTGKTLVVRALIGSLARGNRRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSII 821
Query: 170 FFDELDSIAKXXXXXXXXXXXXXXXVINQILTEMDGMGAKKNVFIIGATNRPDIIDPAIL 349
FFDE+D +A V++ +L +DG+ ++ +V +IGATN PD IDPA+
Sbjct: 822 FFDEIDGLAPKRSRQQDQTHSS---VVSTLLALLDGLKSRGSVVVIGATNYPDAIDPALR 878
Query: 350 RPGRLDQLIYIPLPDEKSREAILRANLRKSP-IAKDVDLSYIAKVTQGFSGADLTEICQR 526
RPGR D+ IY PLP R AI+ + RK P L +IAK T GF+GAD+ +C +
Sbjct: 879 RPGRFDREIYFPLPSVDDRAAIISLHTRKWPKPVSGYLLKWIAKETAGFAGADIQALCTQ 938
Query: 527 ACKLAIRQA 553
A +A+ ++
Sbjct: 939 AAMIALNRS 947
>At2g27600.1 68415.m03346 AAA-type ATPase family protein / vacuolar
sorting protein-related similar to SP|P46467 SKD1
protein (Vacuolar sorting protein 4b) {Mus musculus};
contains Pfam profiles PF00004: ATPase AAA family,
PF04212: MIT domain
Length = 435
Score = 123 bits (297), Expect = 1e-28
Identities = 64/175 (36%), Positives = 104/175 (59%), Gaps = 2/175 (1%)
Frame = +2
Query: 2 PPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSASPCVLFFDE 181
PPG GK+ LAKA+A E + F SV +L++ W GESE V ++F+ AR ++P ++F DE
Sbjct: 173 PPGTGKSYLAKAVATEADSTFFSVSSSDLVSKWMGESEKLVSNLFEMARESAPSIIFVDE 232
Query: 182 LDSIAKXXXXXXXXXXXXXXXVINQILTEMDGMGAK-KNVFIIGATNRPDIIDPAILRPG 358
+DS+ + ++L +M G+G + V ++ ATN P +D AI R
Sbjct: 233 IDSLC--GTRGEGNESEASRRIKTELLVQMQGVGHNDEKVLVLAATNTPYALDQAIRR-- 288
Query: 359 RLDQLIYIPLPDEKSREAILRANLRKSP-IAKDVDLSYIAKVTQGFSGADLTEIC 520
R D+ IYIPLP+ K+R+ + + +L +P + D Y+ + T+GFSG+D++ +C
Sbjct: 289 RFDKRIYIPLPEAKARQHMFKVHLGDTPHNLTEPDFEYLGQKTEGFSGSDVS-VC 342
>At5g53540.1 68418.m06653 MSP1 protein, putative /
intramitochondrial sorting protein, putative similar to
Swiss-Prot:P28737 MSP1 protein (TAT-binding homolog 4)
[Saccharomyces cerevisiae]; contains Pfam domain,
PF00004: ATPase, AAA family
Length = 403
Score = 123 bits (296), Expect = 1e-28
Identities = 68/195 (34%), Positives = 107/195 (54%), Gaps = 2/195 (1%)
Frame = +2
Query: 2 PPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSASPCVLFFDE 181
PPG GKT+LAKAIA E +A FI+VK L++ WFG+++ V +F A P ++F DE
Sbjct: 130 PPGTGKTMLAKAIARESEAVFINVKVSNLMSKWFGDAQKLVSAVFSLAYKLQPAIIFIDE 189
Query: 182 LDSIAKXXXXXXXXXXXXXXXVINQILTEMDGMGAKKN--VFIIGATNRPDIIDPAILRP 355
+DS + + + DG +N V ++ ATNRP +D AILR
Sbjct: 190 VDSF---LGQRRSTDNEAMSNMKTEFMALWDGFTTDQNARVMVLAATNRPSELDEAILR- 245
Query: 356 GRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQGFSGADLTEICQRACK 535
R Q I +PD + R IL+ L+ + D++ IA++ + ++G+D+ E+C++A
Sbjct: 246 -RFPQSFEIGMPDCQERAQILKVVLKGESVESDINYDRIARLCEDYTGSDIFELCKKAAY 304
Query: 536 LAIRQAIEAEIHRER 580
IR+ +EAE +R
Sbjct: 305 FPIREILEAEKEGKR 319
>At4g04910.1 68417.m00714 AAA-type ATPase family protein similar to
SP|P18708 Vesicular-fusion protein NSF
(N-ethylmaleimide-sensitive fusion protein)
(NEM-sensitive fusion protein) {Cricetulus griseus};
contains Pfam profiles PF00004: ATPase AAA family,
PF02359: Cell division protein 48 (CDC48) N-terminal
domain; contains non-consensus AT-AC splice sites at
intron 2
Length = 742
Score = 123 bits (296), Expect = 1e-28
Identities = 75/201 (37%), Positives = 112/201 (55%), Gaps = 13/201 (6%)
Frame = +2
Query: 2 PPGCGKTLLAKAIANECQANFIS-VKGPELLTMWFGESEANVRDIFDKARS-------AS 157
PPG GKTL+A+ I V GPE+L+ + GE+E NVRD+F A AS
Sbjct: 258 PPGTGKTLMARQIGKMLNGKDPKIVNGPEVLSKFVGETEKNVRDLFADAEQDQRTLGDAS 317
Query: 158 PC-VLFFDELDSIAKXXXXXXXXXXXXXXXVINQILTEMDGMGAKKNVFIIGATNRPDII 334
V+ FDE+D+I K ++NQ+LT++DG+ A NV +IG TNR D++
Sbjct: 318 ELHVIIFDEIDAICKSRGSTRDGTGVHDS-IVNQLLTKIDGVEALNNVLLIGMTNRKDLL 376
Query: 335 DPAILRPGRLDQLIYIPLPDEKSREAILRANLRK----SPIAKDVDLSYIAKVTQGFSGA 502
D A+LRPGRL+ + I LPDE R IL+ + K S + D++L +A T+ +SGA
Sbjct: 377 DEALLRPGRLEVQVEISLPDEAGRLQILQIHTNKMKENSFLGTDINLQELAARTKNYSGA 436
Query: 503 DLTEICQRACKLAIRQAIEAE 565
+L + + A A+ + + +
Sbjct: 437 ELEGVVKSATSYALNRQLSMD 457
>At2g34560.2 68415.m04246 katanin, putative similar to katanin p60
subunit [Strongylocentrotus purpuratus] GI:3098603;
contains Pfam profile PF00004: ATPase AAA family
Length = 393
Score = 121 bits (291), Expect = 5e-28
Identities = 61/193 (31%), Positives = 106/193 (54%), Gaps = 1/193 (0%)
Frame = +2
Query: 2 PPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSASPCVLFFDE 181
PPG GKT+LAKA+A EC F ++ +++ W G+SE +R +FD AR +P +F DE
Sbjct: 153 PPGTGKTMLAKAVATECNTTFFNISASSVVSKWRGDSEKLIRVLFDLARHHAPSTIFLDE 212
Query: 182 LDSIAKXXXXXXXXXXXXXXXVINQILTEMDGM-GAKKNVFIIGATNRPDIIDPAILRPG 358
+D+I + ++L +MDG+ + VF++ ATN P +D A+LR
Sbjct: 213 IDAIISQRGGEGRSEHEASRRLKTELLIQMDGLQKTNELVFVLAATNLPWELDAAMLR-- 270
Query: 359 RLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQGFSGADLTEICQRACKL 538
RL++ I +PLPD ++R + + P + + + + ++G+SG+D+ +C+ A
Sbjct: 271 RLEKRILVPLPDPEARRGMFEMLIPSQPGDEPLPHDVLVEKSEGYSGSDIRILCKEAAMQ 330
Query: 539 AIRQAIEAEIHRE 577
+R+ + RE
Sbjct: 331 PLRRTLAILEDRE 343
>At2g34560.1 68415.m04245 katanin, putative similar to katanin p60
subunit [Strongylocentrotus purpuratus] GI:3098603;
contains Pfam profile PF00004: ATPase AAA family
Length = 384
Score = 121 bits (291), Expect = 5e-28
Identities = 61/193 (31%), Positives = 106/193 (54%), Gaps = 1/193 (0%)
Frame = +2
Query: 2 PPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSASPCVLFFDE 181
PPG GKT+LAKA+A EC F ++ +++ W G+SE +R +FD AR +P +F DE
Sbjct: 144 PPGTGKTMLAKAVATECNTTFFNISASSVVSKWRGDSEKLIRVLFDLARHHAPSTIFLDE 203
Query: 182 LDSIAKXXXXXXXXXXXXXXXVINQILTEMDGM-GAKKNVFIIGATNRPDIIDPAILRPG 358
+D+I + ++L +MDG+ + VF++ ATN P +D A+LR
Sbjct: 204 IDAIISQRGGEGRSEHEASRRLKTELLIQMDGLQKTNELVFVLAATNLPWELDAAMLR-- 261
Query: 359 RLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQGFSGADLTEICQRACKL 538
RL++ I +PLPD ++R + + P + + + + ++G+SG+D+ +C+ A
Sbjct: 262 RLEKRILVPLPDPEARRGMFEMLIPSQPGDEPLPHDVLVEKSEGYSGSDIRILCKEAAMQ 321
Query: 539 AIRQAIEAEIHRE 577
+R+ + RE
Sbjct: 322 PLRRTLAILEDRE 334
>At3g27120.1 68416.m03393 spastin ATPase, putative similar to
SWISS-PROT:Q9QYY8 spastin (Fragment) [Mus musculus];
contains Pfam domain, PF00004: ATPase, AAA family
Length = 287
Score = 118 bits (284), Expect = 4e-27
Identities = 67/192 (34%), Positives = 103/192 (53%), Gaps = 3/192 (1%)
Frame = +2
Query: 2 PPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSASPCVLFFDE 181
PPG GKT++ KAIA E +A F + L + W GE E VR +F A P V+F DE
Sbjct: 51 PPGTGKTMIGKAIAGEAKATFFYISASSLTSKWIGEGEKLVRALFGVASCRQPAVIFVDE 110
Query: 182 LDSIAKXXXXXXXXXXXXXXXVINQILTEMDGM-GAKKNVFIIGATNRPDIIDPAILRPG 358
+DS+ + Q L EM+G + + +IGATNRP +D A R
Sbjct: 111 IDSLLS--QRKSDGEHESSRRLKTQFLIEMEGFDSGSEQILLIGATNRPQELDEAARR-- 166
Query: 359 RLDQLIYIPLPDEKSREAILRANLRKSPI--AKDVDLSYIAKVTQGFSGADLTEICQRAC 532
RL + +YIPLP ++R I++ L+K + D D++ I +T+G+SG+D+ + + A
Sbjct: 167 RLTKRLYIPLPSSEARAWIIQNLLKKDGLFTLSDDDMNIICNLTEGYSGSDMKNLVKDAT 226
Query: 533 KLAIRQAIEAEI 568
+R+A++ I
Sbjct: 227 MGPLREALKRGI 238
>At1g62130.1 68414.m07010 AAA-type ATPase family protein contains Pfam
domain, PF00004: ATPase, AAA family
Length = 1025
Score = 113 bits (273), Expect = 8e-26
Identities = 65/190 (34%), Positives = 101/190 (53%), Gaps = 2/190 (1%)
Frame = +2
Query: 2 PPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSASPCVLFFDE 181
P G GKT+LAKA+A E AN I++ ++ WF E E V+ +F A SP ++F DE
Sbjct: 778 PSGTGKTMLAKAVATEAGANLINMS----MSRWFSEGEKYVKAVFSLASKISPSIIFLDE 833
Query: 182 LDSIAKXXXXXXXXXXXXXXXVINQILTEMDGM--GAKKNVFIIGATNRPDIIDPAILRP 355
++S+ N+ + DG+ K+ V ++ ATNRP +D A++R
Sbjct: 834 VESMLHRYRLKTK----------NEFIINWDGLRTNEKERVLVLAATNRPFDLDEAVIR- 882
Query: 356 GRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQGFSGADLTEICQRACK 535
RL + + LPD +SR IL+ L K ++ D D+ +A +T G+SG DL +C A +
Sbjct: 883 -RLPHRLMVGLPDARSRSKILKVILSKEDLSPDFDIDEVASMTNGYSGNDLKNLCVTAAR 941
Query: 536 LAIRQAIEAE 565
I + +E E
Sbjct: 942 RRIIEIVEKE 951
>At1g05910.1 68414.m00620 cell division cycle protein 48-related /
CDC48-related similar to SP|P54609 Cell division cycle
protein 48 homolog {Arabidopsis thaliana}; contains Pfam
profiles PF00004: ATPase AAA family, PF00439:
Bromodomain
Length = 1210
Score = 112 bits (269), Expect = 2e-25
Identities = 65/190 (34%), Positives = 104/190 (54%), Gaps = 7/190 (3%)
Frame = +2
Query: 2 PPGCGKTLLAKAIANEC-----QANFISVKGPELLTMWFGESEANVRDIFDKARSASPCV 166
PPG GKTL+A+A+A + +F KG ++L+ W GE+E ++ +F++A+ P +
Sbjct: 423 PPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSI 482
Query: 167 LFFDELDSIAKXXXXXXXXXXXXXXXVINQILTEMDGMGAKKNVFIIGATNRPDIIDPAI 346
+FFDE+D +A +++ +L MDG+ ++ V +IGATNR D ID A+
Sbjct: 483 IFFDEIDGLAPVRSSKQEQIHNS---IVSTLLALMDGLDSRGQVVLIGATNRVDAIDGAL 539
Query: 347 LRPGRLDQLIYIPLPDEKSREAILRANLR--KSPIAKDVDLSYIAKVTQGFSGADLTEIC 520
RPGR D+ LP ++R IL + R K P +++ +A G+ GADL +C
Sbjct: 540 RRPGRFDREFNFSLPGCEARAEILDIHTRKWKHPPTRELK-EELAATCVGYCGADLKALC 598
Query: 521 QRACKLAIRQ 550
A A R+
Sbjct: 599 TEAAIRAFRE 608
>At1g79560.1 68414.m09275 FtsH protease, putative contains similarity
to chloroplast FtsH protease GI:5804782 from [Nicotiana
tabacum]
Length = 1008
Score = 103 bits (247), Expect = 1e-22
Identities = 62/188 (32%), Positives = 93/188 (49%), Gaps = 5/188 (2%)
Frame = +2
Query: 2 PPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSASPCVLFFDE 181
PPG GKTL A+ +A E F+ G E T A + ++F AR +P +F DE
Sbjct: 534 PPGTGKTLFARTLAKESGLPFVFASGAEF-TDSEKSGAAKINEMFSIARRNAPAFVFVDE 592
Query: 182 LDSIAKXXXXXXXXXXXXXXXVINQI-----LTEMDGMGAKKNVFIIGATNRPDIIDPAI 346
+D+IA +I Q+ T +D ++ V I ATNRPD +D
Sbjct: 593 IDAIAGRHARKDPRRRATFEALIAQLDGEKEKTGIDRFSLRQAVIFICATNRPDELDLEF 652
Query: 347 LRPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQGFSGADLTEICQR 526
+R GR+D+ +YI LPD K R I + +A+D+D + T GFSGAD+ +
Sbjct: 653 VRSGRIDRRLYIGLPDAKQRVQIFGVHSAGKNLAEDIDFGKLVFRTVGFSGADIRNLVNE 712
Query: 527 ACKLAIRQ 550
A +++R+
Sbjct: 713 AAIMSVRK 720
>At3g04340.1 68416.m00459 FtsH protease family protein similar to
chloroplast FtsH protease [Arabidopsis thaliana]
GI:1483215; contains Pfam profiles PF01434: Peptidase
family M41, PF00004: ATPase AAA family
Length = 960
Score = 97.5 bits (232), Expect = 7e-21
Identities = 55/161 (34%), Positives = 84/161 (52%), Gaps = 1/161 (0%)
Frame = +2
Query: 8 GCGKTLLAKAIANECQANFISVKGPELLT-MWFGESEANVRDIFDKARSASPCVLFFDEL 184
G GKT LA AIA E + ++V+ EL +W G+S ANVR++F AR +P ++F ++
Sbjct: 467 GTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSAANVRELFQTARDLAPVIIFVEDF 526
Query: 185 DSIAKXXXXXXXXXXXXXXXVINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRL 364
D A INQ+L E+DG + V ++ T ID A+ RPGR+
Sbjct: 527 DLFAGVRGKFVHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNHKQIDEALRRPGRM 586
Query: 365 DQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQ 487
D++ ++ P E RE IL ++ + VDL KV++
Sbjct: 587 DRVFHLQSPTEMERERILHNAAEETMDRELVDLVDWRKVSE 627
>At4g04180.1 68417.m00593 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 609
Score = 91.1 bits (216), Expect = 6e-19
Identities = 54/177 (30%), Positives = 95/177 (53%), Gaps = 1/177 (0%)
Frame = +2
Query: 2 PPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARS-ASPCVLFFD 178
PPG GKT A+ IAN+ + V +++ ++GESE + +F +A ++F D
Sbjct: 369 PPGTGKTSCARVIANQAGIPLLYVPLEAVMSKYYGESERLLGAVFSQANELPDGAIIFLD 428
Query: 179 ELDSIAKXXXXXXXXXXXXXXXVINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPG 358
E+D+ A V++ +L ++DG +K V +I ATNR +DPA++
Sbjct: 429 EIDAFA---ISRDSEMHEATRRVLSVLLRQIDGFEQEKKVVVIAATNRKQDLDPALI--S 483
Query: 359 RLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQGFSGADLTEICQRA 529
R D +I LPD ++R+ I+ ++ ++K +L +A+ T+ SG D+ ++CQ A
Sbjct: 484 RFDSMIMFDLPDLQTRQEIIAQYAKQ--LSKP-ELVQLAQATEAMSGRDIRDVCQGA 537
>At2g18330.1 68415.m02136 AAA-type ATPase family protein contains
Pfam profile: PF00004 ATPase family associated with
various cellular activities (AAA)
Length = 636
Score = 59.7 bits (138), Expect = 2e-09
Identities = 41/152 (26%), Positives = 75/152 (49%), Gaps = 1/152 (0%)
Frame = +2
Query: 2 PPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSASP-CVLFFD 178
PPG GKT++A+ IA + ++ + G ++ + ++ + +IFD A+ ++ +LF D
Sbjct: 393 PPGTGKTMVAREIARKSGLDYAMMTGGDVAPLG-AQAVTKIHEIFDWAKKSNKGLLLFID 451
Query: 179 ELDSIAKXXXXXXXXXXXXXXXVINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPG 358
E D A +N +L +++ ++ ATNRP +D A+
Sbjct: 452 EAD--AFLCERNSTYMSEAQRSALNALLFRTGDQ--SRDIVLVLATNRPGDLDSAV--TD 505
Query: 359 RLDQLIYIPLPDEKSREAILRANLRKSPIAKD 454
R+D++I PLP E+ R +L+ L K + D
Sbjct: 506 RIDEVIEFPLPGEEERFKLLKLYLNKYLMGDD 537
>At4g36580.1 68417.m05193 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family ('A'TPases
'A'ssociated with diverse cellular 'A'ctivities)
Length = 620
Score = 54.0 bits (124), Expect = 9e-08
Identities = 39/146 (26%), Positives = 70/146 (47%), Gaps = 1/146 (0%)
Frame = +2
Query: 2 PPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSASP-CVLFFD 178
PPG GKT++A+ IA + ++ + G ++ + ++ + IFD A+ ++ +LF D
Sbjct: 378 PPGTGKTMVAREIARKSGLDYAMMTGGDVAPLG-SQAVTKIHQIFDWAKKSNKGLLLFID 436
Query: 179 ELDSIAKXXXXXXXXXXXXXXXVINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPG 358
E D A +N +L +++ ++ ATNR +D A+
Sbjct: 437 EAD--AFLCERNSTYMSEAQRSALNALLFRTGDQ--SRDIVLVLATNRRGDLDSAV--TD 490
Query: 359 RLDQLIYIPLPDEKSREAILRANLRK 436
R+D++I PLP E+ R +L L K
Sbjct: 491 RIDEVIEFPLPGEEERFKLLNLYLNK 516
>At4g24710.1 68417.m03536 AAA-type ATPase family protein similar to
HPV16 E1 protein binding protein [Homo sapiens]
gi|2232019|gb|AAB64095; contains Pfam domain, PF00004:
ATPase, AAA family ('A'TPases 'A'ssociated with diverse
cellular 'A'ctivities)
Length = 467
Score = 53.6 bits (123), Expect = 1e-07
Identities = 57/205 (27%), Positives = 88/205 (42%), Gaps = 15/205 (7%)
Frame = +2
Query: 2 PPGCGKTLLAKAIANE----CQANF-----ISVKGPELLTMWFGESEANVRDIFDKARS- 151
PPG GKT L KA+A + C + + I V L + WF ES V +F K +
Sbjct: 210 PPGTGKTSLCKALAQKLSIRCNSRYPHCQLIEVNAHSLFSKWFSESGKLVAKLFQKIQEM 269
Query: 152 ----ASPCVLFFDELDSIAKXXXXXXXXXXXXXXX-VINQILTEMDGMGAKKNVFIIGAT 316
+ + DE++S+A V+N +LT+MD + + NV I+ +
Sbjct: 270 VEEDGNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSAPNVIILTTS 329
Query: 317 NRPDIIDPAILRPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQGFS 496
N ID A + R D Y+ P R ILR+ + + I+K + S+ QG
Sbjct: 330 NITTAIDVAFV--DRADIKAYVGPPTLHVRYEILRSCVEEL-ISKGIISSF-----QGCD 381
Query: 497 GADLTEICQRACKLAIRQAIEAEIH 571
G + KL+ E+E+H
Sbjct: 382 GLSIPSFSSLKEKLS-----ESEVH 401
>At3g03060.1 68416.m00302 AAA-type ATPase family protein contains a
ATP/GTP-binding site motif A (P-loop), PROSITE:PS00017
Length = 639
Score = 52.0 bits (119), Expect = 4e-07
Identities = 38/146 (26%), Positives = 68/146 (46%), Gaps = 1/146 (0%)
Frame = +2
Query: 2 PPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFD-KARSASPCVLFFD 178
PPG GKT+ A+ +A + ++ + G ++ + ++ + ++FD +S +LF D
Sbjct: 405 PPGTGKTMAARELARKSGLDYALMTGGDVAPLG-AQAVTKIHELFDWGKKSKRGLLLFID 463
Query: 179 ELDSIAKXXXXXXXXXXXXXXXVINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPG 358
E D A +N +L K++ + ATNRP +D A+
Sbjct: 464 EAD--AFLCERNKTYMSEAQRSALNALLFRTGDQ--SKDIVLALATNRPGDLDSAV--AD 517
Query: 359 RLDQLIYIPLPDEKSREAILRANLRK 436
R+D+++ PLP E+ R +L L K
Sbjct: 518 RVDEVLEFPLPGEEERFKLLNLYLEK 543
>At5g16930.1 68418.m01984 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 644
Score = 51.2 bits (117), Expect = 6e-07
Identities = 38/146 (26%), Positives = 65/146 (44%), Gaps = 1/146 (0%)
Frame = +2
Query: 2 PPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFD-KARSASPCVLFFD 178
PPG GKT+ A+ +A ++ + G ++ + ++ + +FD +S +LF D
Sbjct: 406 PPGTGKTMAARELARRSGLDYALMTGGDVAPLG-AQAVTKIHQLFDWSKKSKRGLLLFID 464
Query: 179 ELDSIAKXXXXXXXXXXXXXXXVINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPG 358
E D A +N +L K++ + ATNRP +D A+
Sbjct: 465 EAD--AFLCERNKTYMSEAQRSALNALLFRTGDQ--SKDIVLALATNRPGDLDSAV--AD 518
Query: 359 RLDQLIYIPLPDEKSREAILRANLRK 436
R+D+ + PLP E+ R +L L K
Sbjct: 519 RIDETLEFPLPGEEERFKLLNLYLEK 544
>At5g17760.1 68418.m02082 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 505
Score = 38.7 bits (86), Expect = 0.004
Identities = 33/135 (24%), Positives = 62/135 (45%), Gaps = 8/135 (5%)
Frame = +2
Query: 2 PPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSASPCVLFFDE 181
PPG GK+ L A+AN + + ++ ++ ++++R + R+ S +L ++
Sbjct: 261 PPGTGKSSLVAAMANYLKFDVYDLQLASVMR------DSDLRRLLLATRNRS--ILVIED 312
Query: 182 LDSIA------KXXXXXXXXXXXXXXXVINQILTEMDGMGAK--KNVFIIGATNRPDIID 337
+D + ++ +L +DG+ + II TN D +D
Sbjct: 313 IDCAVDLPNRIEQPVEGKNRGESQGPLTLSGLLNFIDGLWSSCGDERIIIFTTNHKDRLD 372
Query: 338 PAILRPGRLDQLIYI 382
PA+LRPGR+D IY+
Sbjct: 373 PALLRPGRMDMHIYM 387
>At5g17730.1 68418.m02079 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 470
Score = 38.3 bits (85), Expect = 0.005
Identities = 33/133 (24%), Positives = 63/133 (47%), Gaps = 6/133 (4%)
Frame = +2
Query: 2 PPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSASPCVLFFDE 181
PPG GKT L AIAN + + + +L ++ +A++R + ++S +L ++
Sbjct: 253 PPGTGKTSLVAAIANYLKFDIYDL---QLASV---REDADLRRLLLGTTNSS--ILLVED 304
Query: 182 LDSIA----KXXXXXXXXXXXXXXXVINQILTEMDGMGAK--KNVFIIGATNRPDIIDPA 343
+D + ++ +LT +DG+ + +I T + +DPA
Sbjct: 305 IDCAVDLHTRLQPKTQDDTKGSSMLTLSGLLTCIDGLWSSCGDERIVIFTTTHKERLDPA 364
Query: 344 ILRPGRLDQLIYI 382
+LRPGR+D I++
Sbjct: 365 LLRPGRMDMHIHM 377
>At3g50940.1 68416.m05577 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 451
Score = 37.9 bits (84), Expect = 0.006
Identities = 34/132 (25%), Positives = 62/132 (46%), Gaps = 5/132 (3%)
Frame = +2
Query: 2 PPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSASPCVLFFDE 181
PPG GK+ L AIAN NF + +L ++ + A +R + +A+ +L ++
Sbjct: 255 PPGTGKSSLIAAIANHL--NF-DIYDLDLTSL---NNNAELRRLL--MSTANRSILVVED 306
Query: 182 LD---SIAKXXXXXXXXXXXXXXXVINQILTEMDGMGAK--KNVFIIGATNRPDIIDPAI 346
+D + ++ +L +DG+ + I+ TN + +DPA+
Sbjct: 307 IDCSIELKDRSTDQENNDPLHKTVTLSGLLNFVDGLWSSCGNERIIVFTTNYREKLDPAL 366
Query: 347 LRPGRLDQLIYI 382
LRPGR+D I++
Sbjct: 367 LRPGRMDMHIHM 378
>At5g17750.1 68418.m02081 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 392
Score = 36.7 bits (81), Expect = 0.015
Identities = 30/135 (22%), Positives = 61/135 (45%), Gaps = 8/135 (5%)
Frame = +2
Query: 2 PPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSASPCVLFFDE 181
PPG GK+ L A+AN + + ++ + + +A +R + ++S +L ++
Sbjct: 228 PPGTGKSSLVAAMANYLKFDIYDLQLANV------QGDAQLRSLLLATNNSS--ILLVED 279
Query: 182 LDSIA------KXXXXXXXXXXXXXXXVINQILTEMDGMGAK--KNVFIIGATNRPDIID 337
+D + ++ +L +DG+ + +I TN +++D
Sbjct: 280 IDCSVDLPTRLQPATTTLGAPKGSTPLTLSGLLNCIDGLWSSCGDERIVIFTTNNKEVLD 339
Query: 338 PAILRPGRLDQLIYI 382
PA+LRPG +D IY+
Sbjct: 340 PALLRPGCMDMHIYL 354
>At5g17740.1 68418.m02080 AAA-type ATPase family protein h-bcs1,
Homo sapiens, EMBL:AF026849 h-bcs1, Homo sapiens,
EMBL:AF026849 h-bcs1, Homo sapiens, EMBL:AF026849
contains Pfam profile: ATPase family PF00004
gene_id:K17E7.100 contains Pfam profile: ATPase family
PF00004
Length = 533
Score = 36.3 bits (80), Expect = 0.020
Identities = 18/47 (38%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Frame = +2
Query: 248 INQILTEMDGMGAK--KNVFIIGATNRPDIIDPAILRPGRLDQLIYI 382
++ +L +DG+ + II TN + +DPA+LRPGR+D IY+
Sbjct: 336 LSGLLNCIDGLWSSCGNERIIIFTTNNKEKLDPALLRPGRMDMHIYM 382
>At4g05380.1 68417.m00820 AAA-type ATPase family protein contains
similarity to mitochondrial ATPase (AAA family) Bcs1p,
Saccharomyces cerevisiae, Swiss Prot:P32839
Length = 248
Score = 35.1 bits (77), Expect = 0.045
Identities = 35/130 (26%), Positives = 55/130 (42%), Gaps = 8/130 (6%)
Frame = +2
Query: 2 PPGCGKTLLAKAIANECQANFI-----SVKGPELLTMWFGESE-ANVRDIFDKARSASPC 163
PPG GK+ L AIAN + SVK +L +E ++ I D S +
Sbjct: 39 PPGTGKSSLVAAIANFMNYSIYDLQIQSVKDDAMLRQILTSTENRSILLIEDLDCSGADT 98
Query: 164 VLFFDELDSIAKXXXXXXXXXXXXXXXVINQILTEMDGMGAK--KNVFIIGATNRPDIID 337
+ D + ++ +L +DG+ + + II TN + +D
Sbjct: 99 TCRKENKDE-TEYGENQNKKKKKDPKVTLSGLLNFVDGLWSSCVEERIIIFTTNHKEKLD 157
Query: 338 PAILRPGRLD 367
PA+LRPGR+D
Sbjct: 158 PALLRPGRMD 167
>At1g43910.1 68414.m05066 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 475
Score = 34.7 bits (76), Expect = 0.060
Identities = 36/133 (27%), Positives = 56/133 (42%), Gaps = 11/133 (8%)
Frame = +2
Query: 2 PPGCGKTLLAKAIANECQANFI-----SVKGP----ELLTMWFGESEANVRDIFDKARSA 154
PPG GK+ + AIAN + + SV+ E+LT S + DI A ++
Sbjct: 247 PPGTGKSSMVAAIANHMKYHIYDLQIQSVRDDGELREILTSTKNRSILLIEDIDCGADAS 306
Query: 155 SPCVLFFDELDSIAKXXXXXXXXXXXXXXXVINQILTEMDGMGAK--KNVFIIGATNRPD 328
E D ++ +L +DG+ + + II TN +
Sbjct: 307 RRRQSKKKEEDGGEDDGEPQKRKKKFEVGISLSGLLNFVDGLWSSCGEEKIIIFTTNHKE 366
Query: 329 IIDPAILRPGRLD 367
+DPA+LRPGR+D
Sbjct: 367 KLDPALLRPGRMD 379
>At2g18193.1 68415.m02117 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 495
Score = 34.3 bits (75), Expect = 0.079
Identities = 31/127 (24%), Positives = 58/127 (45%), Gaps = 5/127 (3%)
Frame = +2
Query: 2 PPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSASPCVLFFDE 181
PPG GK+ L A+AN + + + EL +++ ++ + + S +L ++
Sbjct: 251 PPGTGKSSLIAAMANYLKFDVFDL---ELSSIY---DNGELKRVLLSTTNRS--ILVIED 302
Query: 182 LDSIAKXXXXXXXXXXXXXXX---VINQILTEMDGMGAK--KNVFIIGATNRPDIIDPAI 346
+D A+ ++ IL +DG+ + I+ TN + +DPA+
Sbjct: 303 IDCNAEVRDREAENQEDEQIKGKVTLSGILNFIDGLWSSFGDERIIVFTTNHKERLDPAL 362
Query: 347 LRPGRLD 367
LRPGR+D
Sbjct: 363 LRPGRMD 369
>At2g46620.1 68415.m05815 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 491
Score = 33.5 bits (73), Expect = 0.14
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +2
Query: 284 AKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPD 394
A + + + T + I DPA+LRPGR+D I+ PL D
Sbjct: 320 ADERIMVFTMTGKEQI-DPAMLRPGRVDVHIHFPLCD 355
>At2g18190.1 68415.m02116 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 494
Score = 33.5 bits (73), Expect = 0.14
Identities = 32/133 (24%), Positives = 60/133 (45%), Gaps = 8/133 (6%)
Frame = +2
Query: 2 PPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSASPCVLFFDE 181
PPG GK+ L A+AN + + + EL +++ A ++ I + S +L ++
Sbjct: 252 PPGTGKSSLIAAMANYLKFDVFDL---ELSSIY---ENAQLKSILLSTTNRS--ILVIED 303
Query: 182 LDSIA------KXXXXXXXXXXXXXXXVINQILTEMDGMGAK--KNVFIIGATNRPDIID 337
+D + + ++ +L +DG+ + I+ TN + +D
Sbjct: 304 IDCSSAEVVDREADEYQEYEEGYYGRVTLSGLLNFVDGLWSSFGDERIIVFTTNHKERLD 363
Query: 338 PAILRPGRLDQLI 376
PA+LRPGR+D I
Sbjct: 364 PALLRPGRMDMHI 376
>At5g57480.1 68418.m07183 AAA-type ATPase family protein contains
Pfam profile: PF00004 ATPase family
Length = 520
Score = 32.3 bits (70), Expect = 0.32
Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Frame = +2
Query: 248 INQILTEMDGMGA---KKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAIL 418
++ +L DG+ + + +F+ TN + +DPA+LR GR+D IY+ + S + +L
Sbjct: 347 LSGLLNFTDGLWSCCGSERIFVF-TTNHIEKLDPALLRSGRMDMHIYMSFCNFPSLKILL 405
Query: 419 R 421
+
Sbjct: 406 K 406
>At5g53890.1 68418.m06703 leucine-rich repeat transmembrane protein
kinase, putative
Length = 1036
Score = 32.3 bits (70), Expect = 0.32
Identities = 28/76 (36%), Positives = 35/76 (46%)
Frame = -1
Query: 577 LAMDLRLDGLANGQLAGSLAYLRQVSATEALRHLGDVRQVNVLSDRRFAKVGAQDGLAGL 398
L D+RL +A G G LAYL +V + DV+ N+L D +F A GLA L
Sbjct: 849 LIWDVRLK-IAQGAARG-LAYLHKVCEPNVIHR--DVKSSNILLDEKFEAHLADFGLARL 904
Query: 397 LVRQRDVDELVQTAGT 350
L R D GT
Sbjct: 905 L-RPYDTHVTTDLVGT 919
>At5g25930.1 68418.m03081 leucine-rich repeat family protein /
protein kinase family protein contains similarity to
Swiss-Prot:P47735 receptor-like protein kinase 5
precursor [Arabidopsis thaliana]; contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 1005
Score = 32.3 bits (70), Expect = 0.32
Identities = 27/72 (37%), Positives = 36/72 (50%)
Frame = -1
Query: 601 GGLLLATPLAMDLRLDGLANGQLAGSLAYLRQVSATEALRHLGDVRQVNVLSDRRFAKVG 422
GG + A L RL+ +A G G L Y+ T A+ H DV+ N+L D F
Sbjct: 780 GGTVEANNLTWSQRLN-IAVGAAQG-LCYMHH-DCTPAIIHR-DVKSSNILLDSEFNAKI 835
Query: 421 AQDGLAGLLVRQ 386
A GLA LL++Q
Sbjct: 836 ADFGLAKLLIKQ 847
>At5g39020.1 68418.m04722 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 813
Score = 31.9 bits (69), Expect = 0.42
Identities = 23/70 (32%), Positives = 33/70 (47%)
Frame = -1
Query: 559 LDGLANGQLAGSLAYLRQVSATEALRHLGDVRQVNVLSDRRFAKVGAQDGLAGLLVRQRD 380
L G+A G +A L YL T + D++ N+L D F A GLA L ++
Sbjct: 593 LYGIALG-IARGLEYLHYGCKTRIVHF--DIKPQNILLDDNFCPKVADFGLAKLCEKRES 649
Query: 379 VDELVQTAGT 350
+ L+ T GT
Sbjct: 650 ILSLIDTRGT 659
>At5g38250.1 68418.m04611 serine/threonine protein kinase, putative
similar to receptor serine/threonine kinase PR55K
gi|1235680|gb|AAC49208; contains protein kinase domain,
Pfam:PF00069; contains serine/threonine protein kinase
domain, INTERPRO:IPR002290
Length = 579
Score = 31.9 bits (69), Expect = 0.42
Identities = 32/98 (32%), Positives = 43/98 (43%), Gaps = 1/98 (1%)
Frame = -1
Query: 640 KRGFPSSHVHNGSGGLLLATPLAMDLR-LDGLANGQLAGSLAYLRQVSATEALRHLGDVR 464
KR + NGS L L +D+ L G+A G +A L YL T + D++
Sbjct: 340 KRAIIYEFLENGS----LDQSLNLDVSTLYGIALG-VARGLEYLHYGCKTRIVHF--DIK 392
Query: 463 QVNVLSDRRFAKVGAQDGLAGLLVRQRDVDELVQTAGT 350
NVL D A GLA L +Q + L+ T GT
Sbjct: 393 PQNVLLDENLRPKVADFGLAKLCEKQESILSLLDTRGT 430
>At1g66920.1 68414.m07605 serine/threonine protein kinase, putative
similar to receptor serine/threonine kinase PR55K
gi|1235680|gb|AAC49208; contains protein kinase domain,
Pfam:PF00069; contains serine/threonine protein kinase
domain, INTERPRO:IPR002290
Length = 609
Score = 31.9 bits (69), Expect = 0.42
Identities = 31/100 (31%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
Frame = -1
Query: 640 KRGFPSSHVHNGSGGLLLATPLA--MDLR-LDGLANGQLAGSLAYLRQVSATEALRHLGD 470
KR + NGS +++ + MD R L G+A G +A L YL T + D
Sbjct: 367 KRAIIYEFMENGSLDKFISSKKSSTMDWRELYGIALG-VARGLEYLHHGCRTRIVHF--D 423
Query: 469 VRQVNVLSDRRFAKVGAQDGLAGLLVRQRDVDELVQTAGT 350
++ NVL D + + GLA L R+ + L+ T GT
Sbjct: 424 IKPQNVLLDDNLSPKVSDFGLAKLCERKESILSLMDTRGT 463
>At1g66910.1 68414.m07604 protein kinase, putative similar to
receptor serine/threonine kinase PR5K
gi|1235680|gb|AAC49208
Length = 666
Score = 31.9 bits (69), Expect = 0.42
Identities = 31/100 (31%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
Frame = -1
Query: 640 KRGFPSSHVHNGSGGLLLATPLA--MDLR-LDGLANGQLAGSLAYLRQVSATEALRHLGD 470
KR + NGS +++ + MD R L G+A G +A L YL T + D
Sbjct: 415 KRAIIYEFMENGSLDKFISSKKSSTMDWRELYGIALG-VARGLEYLHHGCRTRIVHF--D 471
Query: 469 VRQVNVLSDRRFAKVGAQDGLAGLLVRQRDVDELVQTAGT 350
++ NVL D + + GLA L R+ + L+ T GT
Sbjct: 472 IKPQNVLLDDNLSPKVSDFGLAKLCERKESILSLMDTRGT 511
>At4g25835.1 68417.m03716 AAA-type ATPase family protein contains
Pfam profile: PF00004 ATPase family
Length = 506
Score = 31.5 bits (68), Expect = 0.56
Identities = 27/95 (28%), Positives = 49/95 (51%), Gaps = 6/95 (6%)
Frame = +2
Query: 248 INQILTEMDGMGA---KKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAIL 418
++ +L DG+ + + +F+ TN + +DPA+LR GR+D I++ S + +L
Sbjct: 338 LSGLLNFTDGLWSCCGSERIFVF-TTNHIEKLDPALLRSGRMDMHIHMSYCTFSSVKILL 396
Query: 419 RANLR-KSPIAKDVDLSYIAKVTQ--GFSGADLTE 514
R L + DV L +A+V + AD++E
Sbjct: 397 RNYLGFEEGDLNDVVLKELAEVVDRAEITPADVSE 431
>At3g50930.1 68416.m05576 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 576
Score = 31.5 bits (68), Expect = 0.56
Identities = 35/134 (26%), Positives = 53/134 (39%), Gaps = 7/134 (5%)
Frame = +2
Query: 2 PPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSAS-----PCV 166
PPG GK+ L A+AN + ++ LT SE I RS C
Sbjct: 307 PPGTGKSSLIAAMANHLNFDIYDLE----LTAVNNNSELRRLLIATANRSILIVEDIDCS 362
Query: 167 LFFDELDSIAKXXXXXXXXXXXXXXXVINQILTEMDGMGAK--KNVFIIGATNRPDIIDP 340
L + S ++ +L +DG+ + II TN + +D
Sbjct: 363 LELKDRTSDEPPRESDDIEDPRYKKVTLSGLLNFIDGLWSSCGDERIIIFTTNYKEKLDA 422
Query: 341 AILRPGRLDQLIYI 382
A+LRPGR+D I++
Sbjct: 423 ALLRPGRMDMHIHM 436
>At5g50920.1 68418.m06315 ATP-dependent Clp protease ATP-binding
subunit / ClpC almost identical to ClpC GI:2921158 from
[Arabidopsis thaliana]; contains Pfam profile PF02861:
Clp amino terminal domain; contains Pfam profile
PF00004: ATPase, AAA family; contains Pfam profile
PF02151: UvrB/uvrC motif
Length = 929
Score = 31.1 bits (67), Expect = 0.73
Identities = 17/75 (22%), Positives = 40/75 (53%), Gaps = 12/75 (16%)
Frame = +2
Query: 5 PGCGKTLLAKAIANECQANFI--SVKGPELLTM----------WFGESEANVRDIFDKAR 148
PG GKT +A+ +A + + +++G +++T+ + GE E ++ + ++ R
Sbjct: 304 PGVGKTAIAEGLAQRIASGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIR 363
Query: 149 SASPCVLFFDELDSI 193
+ +LF DE+ ++
Sbjct: 364 QSDEIILFIDEVHTL 378
>At3g10810.1 68416.m01301 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 Zinc
finger, C3HC4 type (RING finger)
Length = 496
Score = 31.1 bits (67), Expect = 0.73
Identities = 18/60 (30%), Positives = 19/60 (31%)
Frame = +1
Query: 253 PDPHRDGRHGRQEERLHHRCHKQTGHHRPGHPASRPSGPAHLHPAAGREVPRGHPARQPS 432
P PH H HH H HH H S P + P A P R PS
Sbjct: 325 PSPHSKHHHHHHHHHHHHHHHHHNHHHHHHHNLSPKMAP-EVSPVAS-PAPHRSRKRAPS 382
>At4g05340.1 68417.m00816 hypothetical protein
Length = 96
Score = 30.7 bits (66), Expect = 0.97
Identities = 15/42 (35%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Frame = +2
Query: 248 INQILTEMDGMGAK--KNVFIIGATNRPDIIDPAILRPGRLD 367
++ +L +DG+ + + II TN + +DPA LRPG++D
Sbjct: 29 LSGLLYFVDGLWSNSVEERIIIFTTNHKEKLDPAFLRPGKMD 70
>At3g11390.1 68416.m01387 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 710
Score = 30.7 bits (66), Expect = 0.97
Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 7/67 (10%)
Frame = +1
Query: 277 HGRQEERLHHRCHKQT-----GHHRPGH--PASRPSGPAHLHPAAGREVPRGHPARQPSQ 435
+GR + R H + K+ H P H P+S+P H P P HP+ QP
Sbjct: 65 YGRYQTRNHKKMDKEKVPPPPSPHPPLHSLPSSKPEVKPHPRPTGNPICPVSHPS-QPHT 123
Query: 436 IAYR*GR 456
++ R GR
Sbjct: 124 LSLRSGR 130
>At1g66930.1 68414.m07606 serine/threonine protein kinase family
protein contains Pfam PF00069: Protein kinase domain
Length = 674
Score = 30.7 bits (66), Expect = 0.97
Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
Frame = -1
Query: 640 KRGFPSSHVHNGSGGLLLA--TPLAMDLR-LDGLANGQLAGSLAYLRQVSATEALRHLGD 470
+R + NGS ++ T + +DL L G+A G +A L YL T + D
Sbjct: 414 RRAIIYEFLENGSLDKFISEKTSVILDLTALYGIALG-VARGLEYLHYGCKTRIVHF--D 470
Query: 469 VRQVNVLSDRRFAKVGAQDGLAGLLVRQRDVDELVQTAGT 350
++ NVL D + + GLA L ++ V L+ T GT
Sbjct: 471 IKPQNVLLDDNLSPKVSDFGLAKLCEKKESVMSLMDTRGT 510
>At5g58160.1 68418.m07280 formin homology 2 domain-containing
protein / FH2 domain-containing protein low similarity
to SP|Q05858 Formin (Limb deformity protein) {Gallus
gallus}; contains Pfam profile PF02181: Formin Homology
2(FH2) Domain
Length = 1307
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/70 (24%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = -2
Query: 309 PMMKTFFLAPMPSISVRIWLMTRSAAPPASDTEPPRDLAMESSSSKNNTH-GDADRALSK 133
P+ T +P PS L+ A PA+ T P + ++++ + + H G +D S
Sbjct: 607 PLASTSHASPEPSSKTTNSLLLSPQASPATPTNPSKTVSVDFFGAATSPHLGASDNVASN 666
Query: 132 MSRTFASDSP 103
+ + S P
Sbjct: 667 LGQPARSPPP 676
>At3g48870.1 68416.m05338 ATP-dependent Clp protease ATP-binding
subunit (ClpC) identical to AtClpC GI:5360574 from
[Arabidopsis thaliana]; contains Pfam profiles PF02861:
Clp amino terminal domain and PF02151: UvrB/uvrC motif
Length = 952
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/75 (22%), Positives = 39/75 (52%), Gaps = 12/75 (16%)
Frame = +2
Query: 5 PGCGKTLLAKAIANECQANFI--SVKGPELLTM----------WFGESEANVRDIFDKAR 148
PG GKT +A+ +A + + +++G ++T+ + GE E ++ + ++ R
Sbjct: 325 PGVGKTAIAEGLAQRIASGDVPETIEGKTVITLDMGLLVAGTKYRGEFEERLKKLMEEIR 384
Query: 149 SASPCVLFFDELDSI 193
+ +LF DE+ ++
Sbjct: 385 QSDEIILFIDEVHTL 399
>At5g20050.1 68418.m02387 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 452
Score = 29.9 bits (64), Expect = 1.7
Identities = 30/104 (28%), Positives = 45/104 (43%)
Frame = -1
Query: 700 TRDRRAXFIASSKVSAANLRKRGFPSSHVHNGSGGLLLATPLAMDLRLDGLANGQLAGSL 521
T R F+ + ++L FP SGG L+ + +D +A +L
Sbjct: 168 TSANRPRFLVYDYIVNSSLDIWIFPDRGNRGRSGGGCLSWEQRYQVAID------VAKAL 221
Query: 520 AYLRQVSATEALRHLGDVRQVNVLSDRRFAKVGAQDGLAGLLVR 389
AYL ++ L HL DV+ N+L D F V GL+ L+ R
Sbjct: 222 AYLHHDCRSKIL-HL-DVKPENILLDENFRAVVTDFGLSKLIAR 263
>At3g28520.1 68416.m03562 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 478
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = +2
Query: 248 INQILTEMDGM--GAKKNVFIIGATNRPDIIDPAILRPGRLD 367
++ +L +DG+ II TN D +DPA++R GR+D
Sbjct: 330 LSGLLNAIDGLWSACSDEKIIIFTTNFVDNLDPALIRRGRMD 371
>At3g28510.1 68416.m03561 AAA-type ATPase family protein contains
Pfam profile: PF00004 ATPase family
Length = 530
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +2
Query: 248 INQILTEMDGM--GAKKNVFIIGATNRPDIIDPAILRPGRLDQLI 376
++ +L +DG+ I+ TN D +DPA++R GR+D I
Sbjct: 346 LSGLLNSIDGLWSACSGEKIIVFTTNFVDKLDPALIRRGRMDNHI 390
>At2g37280.1 68415.m04573 ABC transporter family protein similar to
PDR5-like ABC transporter GI:1514643 from [Spirodela
polyrhiza]
Length = 1413
Score = 29.9 bits (64), Expect = 1.7
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +2
Query: 2 PPGCGKTLLAKAIANECQAN 61
PPGCGKT L KA++ + N
Sbjct: 173 PPGCGKTTLLKALSGNLENN 192
>At3g63100.1 68416.m07087 glycine-rich protein
Length = 199
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/42 (40%), Positives = 18/42 (42%), Gaps = 4/42 (9%)
Frame = +1
Query: 262 HRDGRHGRQ----EERLHHRCHKQTGHHRPGHPASRPSGPAH 375
H RHGR +R HHR H HH GH R G H
Sbjct: 104 HGHRRHGRDHRHGRDRGHHRGHGH--HHHRGHRRGRGRGHGH 143
>At3g28540.1 68416.m03564 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 510
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +2
Query: 248 INQILTEMDGM--GAKKNVFIIGATNRPDIIDPAILRPGRLDQLI 376
++ +L +DG+ I+ TN D +DPA++R GR+D I
Sbjct: 345 LSGLLNAIDGLWSACSGEKIIVFTTNYLDKLDPALIRRGRMDNHI 389
>At1g79670.2 68414.m09292 wall-associated kinase, putative similar
to wall-associated kinase 4 GI:3355308 from [Arabidopsis
thaliana]; isoform contains non-consensus AT-acceptor
splice site.
Length = 714
Score = 29.5 bits (63), Expect = 2.2
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = -1
Query: 538 QLAGSLAYLRQVSATEALRHLGDVRQVNVLSDRRF-AKVGAQDGLAGLLVRQRDVDELVQ 362
++AG+LAYL ++T DV+ N+L D ++ AKV + V Q + LV
Sbjct: 489 EIAGALAYLHSAASTPVYHR--DVKTTNILLDEKYRAKVSDFGTSRSINVDQTHLTTLV- 545
Query: 361 TAGT 350
AGT
Sbjct: 546 -AGT 548
>At1g79670.1 68414.m09291 wall-associated kinase, putative similar
to wall-associated kinase 4 GI:3355308 from [Arabidopsis
thaliana]; isoform contains non-consensus AT-acceptor
splice site.
Length = 751
Score = 29.5 bits (63), Expect = 2.2
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = -1
Query: 538 QLAGSLAYLRQVSATEALRHLGDVRQVNVLSDRRF-AKVGAQDGLAGLLVRQRDVDELVQ 362
++AG+LAYL ++T DV+ N+L D ++ AKV + V Q + LV
Sbjct: 526 EIAGALAYLHSAASTPVYHR--DVKTTNILLDEKYRAKVSDFGTSRSINVDQTHLTTLV- 582
Query: 361 TAGT 350
AGT
Sbjct: 583 -AGT 585
>At5g38240.1 68418.m04610 serine/threonine protein kinase, putative
similar to receptor serine/threonine kinase PR55K
gi|1235680|gb|AAC49208; contains protein kinase domain,
Pfam:PF00069; contains serine/threonine protein kinase
domain, INTERPRO:IPR002290
Length = 588
Score = 29.1 bits (62), Expect = 3.0
Identities = 23/70 (32%), Positives = 33/70 (47%)
Frame = -1
Query: 559 LDGLANGQLAGSLAYLRQVSATEALRHLGDVRQVNVLSDRRFAKVGAQDGLAGLLVRQRD 380
L G+A G +A + YL + + H D++ NVL D A GLA L +Q
Sbjct: 372 LYGIALG-VARGIEYLH-FGCKKRIVHF-DIKPQNVLLDENLKPKVADFGLAKLCEKQES 428
Query: 379 VDELVQTAGT 350
+ L+ T GT
Sbjct: 429 ILSLLDTRGT 438
>At4g13750.1 68417.m02134 expressed protein
Length = 2137
Score = 29.1 bits (62), Expect = 3.0
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +2
Query: 32 KAIANECQANFISVKGPELLTMWFG-ESEANVRDIFDKARSASPCVLF 172
K ++ + A ++ + P + G +SE N +I K +S+S CVLF
Sbjct: 167 KVLSRQTLARLVAEQFPSISFKVVGRDSEENFSEIIGKKKSSSKCVLF 214
>At5g53350.1 68418.m06630 ATP-dependent Clp protease ATP-binding
subunit ClpX1 (CLPX) identical to CLP protease
regulatory subunit CLPX GI:2674203 from [Arabidopsis
thaliana]
Length = 579
Score = 28.7 bits (61), Expect = 3.9
Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 6/72 (8%)
Frame = +2
Query: 2 PPGCGKTLLAKAIANECQANFISVKGPELLTM-WFGESEANV----RDIFD-KARSASPC 163
P G GKTLLAK +A F+ L + GE ++ + D +A
Sbjct: 231 PTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLTVADYNVAAAQQG 290
Query: 164 VLFFDELDSIAK 199
+++ DE+D I K
Sbjct: 291 IVYIDEVDKITK 302
>At5g39030.1 68418.m04723 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 806
Score = 28.7 bits (61), Expect = 3.9
Identities = 29/100 (29%), Positives = 43/100 (43%), Gaps = 3/100 (3%)
Frame = -1
Query: 640 KRGFPSSHVHNGSGGLLLAT--PLAMDLR-LDGLANGQLAGSLAYLRQVSATEALRHLGD 470
KR + NGS ++ L D+ L G+A G +A L YL T + D
Sbjct: 565 KRAIVYEFLENGSLDQFMSRNKSLTQDVTTLYGIALG-IARGLEYLHYGCKTRIVHF--D 621
Query: 469 VRQVNVLSDRRFAKVGAQDGLAGLLVRQRDVDELVQTAGT 350
++ N+L D + GLA L ++ V L+ T GT
Sbjct: 622 IKPQNILLDGNLCPKVSDFGLAKLCEKRESVLSLMDTRGT 661
>At3g28580.1 68416.m03568 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 500
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +2
Query: 302 IIGATNRPDIIDPAILRPGRLDQLI 376
I+ TN D +DPA++R GR+D+ I
Sbjct: 365 IVFTTNFVDKLDPALIRKGRMDKHI 389
>At1g67000.1 68414.m07618 protein kinase family protein contains
protein kinase domain, Pfam:PF00069; contains
serine/threonine protein kinase domain,
INTERPRO:IPR002290
Length = 717
Score = 28.7 bits (61), Expect = 3.9
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = -1
Query: 571 MDLR-LDGLANGQLAGSLAYLRQVSATEALRHLGDVRQVNVLSDRRFAKVGAQDGLAGLL 395
+DL+ L G+A G +A L YL T + D++ NVL D + GLA L
Sbjct: 474 LDLKTLYGIALG-VARGLEYLHYGCKTRIVHF--DIKPQNVLLDDNLCPKVSDFGLAKLC 530
Query: 394 VRQRDVDELVQTAGT 350
++ + L+ T GT
Sbjct: 531 EKKESILSLLDTRGT 545
>At1g33360.1 68414.m04129 ATP-dependent Clp protease ATP-binding
subunit ClpX, putative similar to CLP protease
regulatory subunit CLPX GI:2674203 from [Arabidopsis
thaliana]
Length = 656
Score = 28.7 bits (61), Expect = 3.9
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 6/72 (8%)
Frame = +2
Query: 2 PPGCGKTLLAKAIANECQANFISVKGPELLTMWF--GESEANVRDIFDKA----RSASPC 163
P G GKTLLAK +A F+ L + + E+ + + A ++A
Sbjct: 316 PTGSGKTLLAKTLARLVNVPFVIADATTLTQAGYVGDDVESILHKLLTVAEFNVQAAQQG 375
Query: 164 VLFFDELDSIAK 199
+++ DE+D I K
Sbjct: 376 IVYIDEVDKITK 387
>At1g18150.2 68414.m02253 mitogen-activated protein kinase, putative
/ MAPK, putative (MPK8) identical to ATMPK8 [Arabidopsis
thaliana] gi|7106542|dbj|BAA92222; mitogen-activated
protein kinase (MAPK), PMID:12119167; similar to
mitogen-activated protein kinase GI:5815410 from (Oryza
sativa)
Length = 589
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = -2
Query: 204 RDLAMESSSSKNNTHGDADRALSKMSRTFASDSPNHMVSS 85
R + SSSS NN + + ++ + S +S +PNH +S
Sbjct: 18 RPSSSSSSSSSNNNNNNHEQPIFNSSSFSSSSNPNHSANS 57
>At1g18150.1 68414.m02252 mitogen-activated protein kinase, putative
/ MAPK, putative (MPK8) identical to ATMPK8 [Arabidopsis
thaliana] gi|7106542|dbj|BAA92222; mitogen-activated
protein kinase (MAPK), PMID:12119167; similar to
mitogen-activated protein kinase GI:5815410 from (Oryza
sativa)
Length = 589
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = -2
Query: 204 RDLAMESSSSKNNTHGDADRALSKMSRTFASDSPNHMVSS 85
R + SSSS NN + + ++ + S +S +PNH +S
Sbjct: 18 RPSSSSSSSSSNNNNNNHEQPIFNSSSFSSSSNPNHSANS 57
>At1g01540.2 68414.m00071 protein kinase family protein contains
protein kinase domain, Pfam:PF00069; contains
serine/threonine protein kinase domain,
INTERPRO:IPR002290
Length = 472
Score = 28.7 bits (61), Expect = 3.9
Identities = 19/63 (30%), Positives = 34/63 (53%)
Frame = -1
Query: 583 TPLAMDLRLDGLANGQLAGSLAYLRQVSATEALRHLGDVRQVNVLSDRRFAKVGAQDGLA 404
+PL D+R++ + +A LAYL + + + D++ N+L DR++ + GLA
Sbjct: 247 SPLTWDIRMNIILG--MAKGLAYLHEGLEPKVVHR--DIKSSNILLDRQWNAKVSDFGLA 302
Query: 403 GLL 395
LL
Sbjct: 303 KLL 305
>At1g01540.1 68414.m00070 protein kinase family protein contains
protein kinase domain, Pfam:PF00069; contains
serine/threonine protein kinase domain,
INTERPRO:IPR002290
Length = 386
Score = 28.7 bits (61), Expect = 3.9
Identities = 19/63 (30%), Positives = 34/63 (53%)
Frame = -1
Query: 583 TPLAMDLRLDGLANGQLAGSLAYLRQVSATEALRHLGDVRQVNVLSDRRFAKVGAQDGLA 404
+PL D+R++ + +A LAYL + + + D++ N+L DR++ + GLA
Sbjct: 247 SPLTWDIRMNIILG--MAKGLAYLHEGLEPKVVHR--DIKSSNILLDRQWNAKVSDFGLA 302
Query: 403 GLL 395
LL
Sbjct: 303 KLL 305
>At5g45200.1 68418.m05548 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1261
Score = 28.3 bits (60), Expect = 5.2
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +2
Query: 5 PGCGKTLLAKAIANECQANFI 67
PG GKT LAK + +EC +F+
Sbjct: 246 PGIGKTTLAKRLFSECGKHFL 266
>At5g40010.1 68418.m04852 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 514
Score = 28.3 bits (60), Expect = 5.2
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +2
Query: 302 IIGATNRPDIIDPAILRPGRLDQLI 376
I+ TN D +DPA++R GR+D+ I
Sbjct: 367 IVFTTNFIDKLDPALIRKGRMDKHI 391
>At5g38260.1 68418.m04612 serine/threonine protein kinase, putative
similar to receptor serine/threonine kinase PR55K
gi|1235680|gb|AAC49208; contains protein kinase domain,
Pfam:PF00069; contains serine/threonine protein kinase
domain, INTERPRO:IPR002290
Length = 638
Score = 28.3 bits (60), Expect = 5.2
Identities = 26/99 (26%), Positives = 41/99 (41%), Gaps = 2/99 (2%)
Frame = -1
Query: 640 KRGFPSSHVHNGSGGLLLATPLAMDLRLDGLANGQL--AGSLAYLRQVSATEALRHLGDV 467
KR + NGS L+ +++L + L L A L YL T + D+
Sbjct: 388 KRAIVYEFLENGSLDQFLSEKKSLNLDVSTLYRIALGVARGLDYLHHGCKTRIVHF--DI 445
Query: 466 RQVNVLSDRRFAKVGAQDGLAGLLVRQRDVDELVQTAGT 350
+ N+L D F + GLA L ++ + L+ GT
Sbjct: 446 KPQNILLDDTFCPKVSDFGLAKLCEKRESILSLLDARGT 484
>At5g18350.1 68418.m02159 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1193
Score = 28.3 bits (60), Expect = 5.2
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +2
Query: 2 PPGCGKTLLAKAIANECQANF 64
PPG GKT +A+A+ ++ NF
Sbjct: 222 PPGIGKTTIARALRDQISENF 242
>At4g34500.1 68417.m04904 protein kinase family protein contains
protein kinase domain, Pfam:PF00069; contains
serine/threonine protein kinase domain,
INTERPRO:IPR002290
Length = 437
Score = 28.3 bits (60), Expect = 5.2
Identities = 21/63 (33%), Positives = 34/63 (53%)
Frame = -1
Query: 583 TPLAMDLRLDGLANGQLAGSLAYLRQVSATEALRHLGDVRQVNVLSDRRFAKVGAQDGLA 404
+PL D+R+ +A G G LAYL + + + DV+ N+L D+++ + GLA
Sbjct: 240 SPLTWDIRMK-IAIGTAKG-LAYLHEGLEPKVVHR--DVKSSNILLDKKWNAKVSDFGLA 295
Query: 403 GLL 395
LL
Sbjct: 296 KLL 298
>At4g25390.2 68417.m03653 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 497
Score = 28.3 bits (60), Expect = 5.2
Identities = 19/56 (33%), Positives = 27/56 (48%)
Frame = -1
Query: 475 GDVRQVNVLSDRRFAKVGAQDGLAGLLVRQRDVDELVQTAGTQDGRVDDVRSVCGT 308
GD++ NVL D F+ A GLA L Q ++ + G V++V SV T
Sbjct: 224 GDIKPSNVLLDSLFSAKIADFGLARLKAEQVEISVAPERDG-DGSMVEEVESVVTT 278
>At4g25390.1 68417.m03652 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 651
Score = 28.3 bits (60), Expect = 5.2
Identities = 19/56 (33%), Positives = 27/56 (48%)
Frame = -1
Query: 475 GDVRQVNVLSDRRFAKVGAQDGLAGLLVRQRDVDELVQTAGTQDGRVDDVRSVCGT 308
GD++ NVL D F+ A GLA L Q ++ + G V++V SV T
Sbjct: 224 GDIKPSNVLLDSLFSAKIADFGLARLKAEQVEISVAPERDG-DGSMVEEVESVVTT 278
>At3g60730.1 68416.m06794 pectinesterase family protein contains
Pfam profile: PF01095 pectinesterase
Length = 519
Score = 28.3 bits (60), Expect = 5.2
Identities = 15/45 (33%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Frame = +1
Query: 280 GRQEERLHHRCHKQTGHHRPGHPASRPS-GPAHLHPAAGREVPRG 411
G ++RLH + G RP H +RP+ GP H R G
Sbjct: 147 GHMKKRLHGPARQGHGPTRPKHRPTRPNHGPGRSHHGPSRPNQNG 191
>At1g66980.1 68414.m07616 protein kinase family protein /
glycerophosphoryl diester phosphodiesterase family
protein similar to leaf rust resistance kinase Lr10
GI:1680685 from [Triticum aestivum]; contains Pfam
profiles PF03009: Glycerophosphoryl diester
phosphodiesterase family, PF00069: Protein kinase domain
Length = 1109
Score = 28.3 bits (60), Expect = 5.2
Identities = 30/100 (30%), Positives = 44/100 (44%), Gaps = 3/100 (3%)
Frame = -1
Query: 640 KRGFPSSHVHNGSGG--LLLATPLAMD-LRLDGLANGQLAGSLAYLRQVSATEALRHLGD 470
KR + NGS +L T + MD L +A G +A L YL T + D
Sbjct: 863 KRAIIYEFLENGSLDKFILGKTSVNMDWTALYRIALG-VAHGLEYLHHSCKTRIVHF--D 919
Query: 469 VRQVNVLSDRRFAKVGAQDGLAGLLVRQRDVDELVQTAGT 350
++ NVL D F + GLA L ++ + ++ T GT
Sbjct: 920 IKPQNVLLDDSFCPKVSDFGLAKLCEKKESILSMLDTRGT 959
>At4g02630.1 68417.m00357 protein kinase family protein contains
protein kinase domain, Pfam:PF00069; contains
serine/threonine protein kinase domain,
INTERPRO:IPR002290
Length = 492
Score = 27.9 bits (59), Expect = 6.8
Identities = 20/69 (28%), Positives = 36/69 (52%)
Frame = -1
Query: 601 GGLLLATPLAMDLRLDGLANGQLAGSLAYLRQVSATEALRHLGDVRQVNVLSDRRFAKVG 422
GGL +PL ++R++ + G G L YL + + + D++ N+L D+++
Sbjct: 250 GGLGFKSPLTWEIRMN-IVLGTAKG-LMYLHEGLEPKVVHR--DIKSSNILLDKQWNSKV 305
Query: 421 AQDGLAGLL 395
+ GLA LL
Sbjct: 306 SDFGLAKLL 314
>At4g16490.1 68417.m02496 armadillo/beta-catenin repeat family
protein contains Pfam profile: PF00514
armadillo/beta-catenin-like repeat
Length = 268
Score = 27.5 bits (58), Expect = 9.0
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +3
Query: 39 SPTSVRLTLYQ*RDQSCSPCGSASPRRTYAT 131
S +VR YQ DQSCS GS + YA+
Sbjct: 40 SMRTVRSNFYQSGDQSCSFVGSIGDKSEYAS 70
>At4g01330.1 68417.m00173 protein kinase family protein contains
protein kinase domain, Pfam:PF00069; contains
serine/threonine protein kinase domain,
INTERPRO:IPR002290
Length = 329
Score = 27.5 bits (58), Expect = 9.0
Identities = 19/63 (30%), Positives = 34/63 (53%)
Frame = -1
Query: 583 TPLAMDLRLDGLANGQLAGSLAYLRQVSATEALRHLGDVRQVNVLSDRRFAKVGAQDGLA 404
+PL D+R++ + +A LAYL + + + D++ N+L DR++ + GLA
Sbjct: 255 SPLTWDIRMNIILC--MAKGLAYLHEGLEPKVVHR--DIKSSNILLDRQWNAKVSDFGLA 310
Query: 403 GLL 395
LL
Sbjct: 311 KLL 313
>At3g53480.1 68416.m05904 ABC transporter family protein PDR5-like
ABC transporter, Spirodela polyrrhiza, EMBL:Z70524
Length = 1450
Score = 27.5 bits (58), Expect = 9.0
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +2
Query: 2 PPGCGKTLLAKAIANECQAN 61
PP CGKT L KA++ + N
Sbjct: 208 PPSCGKTTLLKALSGNLENN 227
>At3g28600.1 68416.m03570 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 475
Score = 27.5 bits (58), Expect = 9.0
Identities = 15/45 (33%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Frame = +2
Query: 248 INQILTEMDGMGAK--KNVFIIGATNRPDIIDPAILRPGRLDQLI 376
++ +L +DG+ + + II TN + +DPA++R GR+D I
Sbjct: 332 LSGLLNFIDGIWSACGQERIIIFTTNHFEKLDPALIRRGRMDMHI 376
>At2g48100.2 68415.m06021 exonuclease family protein contains Pfam
domain PF00929: exonuclease
Length = 344
Score = 27.5 bits (58), Expect = 9.0
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = -1
Query: 409 LAGLLVRQRDVD-ELVQTAGTQDGRVDDVRSVC-GTDDEDVLLGAH 278
LAG ++ +D E+V G DG +D SVC DDE+V+ H
Sbjct: 125 LAGSRLKAMALDCEMV--GGGADGTIDQCASVCLVDDDENVIFSTH 168
>At2g48100.1 68415.m06020 exonuclease family protein contains Pfam
domain PF00929: exonuclease
Length = 344
Score = 27.5 bits (58), Expect = 9.0
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = -1
Query: 409 LAGLLVRQRDVD-ELVQTAGTQDGRVDDVRSVC-GTDDEDVLLGAH 278
LAG ++ +D E+V G DG +D SVC DDE+V+ H
Sbjct: 125 LAGSRLKAMALDCEMV--GGGADGTIDQCASVCLVDDDENVIFSTH 168
>At1g26170.1 68414.m03194 importin beta-2 subunit family protein
similar to Importin9 isoform 1 [Mus musculus]
GI:15186756; contains Pfam profile PF03810:
Importin-beta N-terminal domain
Length = 931
Score = 27.5 bits (58), Expect = 9.0
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = +2
Query: 41 ANECQANFISVKGPELLTMWFGESEANVRDIFD 139
A EC A FIS ELLT W G+ +R + D
Sbjct: 623 ATECLAAFISSGRQELLT-WSGDPGFTMRSLLD 654
>At1g25390.1 68414.m03152 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 629
Score = 27.5 bits (58), Expect = 9.0
Identities = 28/84 (33%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
Frame = -1
Query: 538 QLAGSLAYLRQVSATEALRHLGDVRQVNVLSDRRFAKVGAQDGLAGLLVRQRDVDELVQT 359
+ A +LAYL A++ + DV+ N+L DR F A GL+ LL DV +
Sbjct: 399 ETASALAYLH---ASDIIHR--DVKTTNILLDRNFGVKVADFGLSRLL--PSDVTHVSTA 451
Query: 358 AGTQDGRVDDVRSVCG--TDDEDV 293
G VD C TD DV
Sbjct: 452 PQGTPGYVDPEYHRCYHLTDKSDV 475
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,665,955
Number of Sequences: 28952
Number of extensions: 306150
Number of successful extensions: 1526
Number of sequences better than 10.0: 125
Number of HSP's better than 10.0 without gapping: 1323
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1432
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1496852856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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