Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0840
         (590 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton anti...    23   5.6  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    23   7.4  
AJ297933-1|CAC35453.2|  392|Anopheles gambiae Ag9 protein protein.     23   7.4  
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    23   7.4  

>EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton
           antiporter protein.
          Length = 647

 Score = 23.4 bits (48), Expect = 5.6
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +1

Query: 325 ICLYIIQRGFLSMEEVKTLMRFFGGI 402
           +C Y+ + G   +  ++TLM F GG+
Sbjct: 381 LCKYVPEPGDAYVVPIRTLMLFGGGL 406


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 23.0 bits (47), Expect = 7.4
 Identities = 16/53 (30%), Positives = 23/53 (43%)
 Frame = -2

Query: 397 LRRSALKFLLLPLIENHVGLCIGRSMELHNTRF**RYRPXQGSFHQSFQLRPG 239
           L RSA  F L     +   L      E +++R   R+R    SF Q  ++R G
Sbjct: 356 LNRSAFNFRLFKYAASAHRLYNRARFEAYSSRLQSRFRSDPASFWQFVRIRRG 408


>AJ297933-1|CAC35453.2|  392|Anopheles gambiae Ag9 protein protein.
          Length = 392

 Score = 23.0 bits (47), Expect = 7.4
 Identities = 10/50 (20%), Positives = 23/50 (46%)
 Frame = -3

Query: 516 IRILVVHGRVQSVNEFQIFRTVRSSICSHYEENSSYTADASEEAH*SFYF 367
           ++ + VHG V  +     ++ +R +I   +     + + A  E H  ++F
Sbjct: 273 VKAVTVHGEVYHLTWINHYKAIRKAIGIEWPGYMIHESGAWSEVHRRWFF 322


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 23.0 bits (47), Expect = 7.4
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = -2

Query: 442 HMLALRRKQ*LYSRCLRRSALKFLLLPLIENHVGLCIGRSM 320
           H+L L+  + L +R  R  A++ +      +HV +C+  SM
Sbjct: 771 HVLVLKENRQLANRVHRLLAMRVVRAYKTISHVAVCVIASM 811


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 615,012
Number of Sequences: 2352
Number of extensions: 11327
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 56768445
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)