Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0838
         (610 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   0.38 
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    22   3.5  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    22   3.5  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   4.6  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   4.6  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 25.4 bits (53), Expect = 0.38
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = +2

Query: 23   TLLTWRTSAQSSTSPDAGSLPTTTRSPTREGYLSPLVAVLFE 148
            T  T RT+    T+    + PTTT  PT+   + P   V+ E
Sbjct: 1054 TTTTRRTTTTRPTTTSTTTRPTTTNWPTQGTTIPPPAVVMPE 1095


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -2

Query: 105 VGERVVVGREPASGDVLDWADV 40
           +GE + VG  P    +  WAD+
Sbjct: 485 IGENITVGVNPEPERMKFWADI 506


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -2

Query: 105 VGERVVVGREPASGDVLDWADV 40
           +GE + VG  P    +  WAD+
Sbjct: 487 IGENITVGVNPEPERMKFWADI 508


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 10/43 (23%), Positives = 18/43 (41%)
 Frame = -3

Query: 551 TYVMKHTSIHFSRTTGLICSNSKPLHSQFNIITYNDHDNNLQE 423
           T + K    H  +    +C N     + ++  TYN+  N L +
Sbjct: 318 TNLEKSNLNHNEQLRKYLCKNEDETKNHYSKNTYNEQGNKLAD 360


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 10/43 (23%), Positives = 18/43 (41%)
 Frame = -3

Query: 551 TYVMKHTSIHFSRTTGLICSNSKPLHSQFNIITYNDHDNNLQE 423
           T + K    H  +    +C N     + ++  TYN+  N L +
Sbjct: 210 TNLEKSNLNHNEQLRKYLCKNEDETKNHYSKNTYNEQGNKLAD 252


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,073
Number of Sequences: 336
Number of extensions: 2981
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15457268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)