Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0838
(610 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 25 0.77
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 25 0.77
AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precur... 23 3.1
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 23 3.1
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 22 4.1
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 22 4.1
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 22 4.1
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 22 4.1
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 22 4.1
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 22 4.1
AY545000-1|AAS50159.2| 126|Apis mellifera profilin protein. 22 4.1
DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein. 21 9.4
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 24.6 bits (51), Expect = 0.77
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = -1
Query: 424 SVTYELHTTTFSSPGANLIQFMTLTLNDLSKVTRLGMAT 308
S Y+L T + G+N +F +TL ++++ G+A+
Sbjct: 1565 SSVYQLKVETHNVAGSNQAEFTFVTLTKEGELSKRGIAS 1603
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 24.6 bits (51), Expect = 0.77
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = -1
Query: 424 SVTYELHTTTFSSPGANLIQFMTLTLNDLSKVTRLGMAT 308
S Y+L T + G+N +F +TL ++++ G+A+
Sbjct: 1561 SSVYQLKVETHNVAGSNQAEFTFVTLTKEGELSKRGIAS 1599
>AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precursor
protein.
Length = 405
Score = 22.6 bits (46), Expect = 3.1
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 137 VLFEKPRTGVLINIECKAW 193
VL++ PRT L+NI +W
Sbjct: 353 VLWQNPRTKRLVNIGIISW 371
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 22.6 bits (46), Expect = 3.1
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +3
Query: 54 PVHPPTRVPFLLLPV 98
P+ PP + P++ LPV
Sbjct: 819 PMQPPQQNPYMFLPV 833
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 4.1
Identities = 8/26 (30%), Positives = 16/26 (61%)
Frame = -3
Query: 590 KRXNQVNSGIXTHTYVMKHTSIHFSR 513
K+ ++ + + T+ +HTS H+SR
Sbjct: 208 KKYATSSNSLRSRTHGFQHTSSHYSR 233
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 4.1
Identities = 8/26 (30%), Positives = 16/26 (61%)
Frame = -3
Query: 590 KRXNQVNSGIXTHTYVMKHTSIHFSR 513
K+ ++ + + T+ +HTS H+SR
Sbjct: 208 KKYATSSNSLRSRTHGFQHTSSHYSR 233
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 4.1
Identities = 8/26 (30%), Positives = 16/26 (61%)
Frame = -3
Query: 590 KRXNQVNSGIXTHTYVMKHTSIHFSR 513
K+ ++ + + T+ +HTS H+SR
Sbjct: 208 KKYATSSNSLRSRTHGFQHTSSHYSR 233
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 4.1
Identities = 8/26 (30%), Positives = 16/26 (61%)
Frame = -3
Query: 590 KRXNQVNSGIXTHTYVMKHTSIHFSR 513
K+ ++ + + T+ +HTS H+SR
Sbjct: 208 KKYATSSNSLRSRTHGFQHTSSHYSR 233
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 22.2 bits (45), Expect = 4.1
Identities = 8/26 (30%), Positives = 16/26 (61%)
Frame = -3
Query: 590 KRXNQVNSGIXTHTYVMKHTSIHFSR 513
K+ ++ + + T+ +HTS H+SR
Sbjct: 197 KKYATSSNSLRSRTHGFQHTSSHYSR 222
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 22.2 bits (45), Expect = 4.1
Identities = 8/26 (30%), Positives = 16/26 (61%)
Frame = -3
Query: 590 KRXNQVNSGIXTHTYVMKHTSIHFSR 513
K+ ++ + + T+ +HTS H+SR
Sbjct: 208 KKYATSSNSLRSRTHGFQHTSSHYSR 233
>AY545000-1|AAS50159.2| 126|Apis mellifera profilin protein.
Length = 126
Score = 22.2 bits (45), Expect = 4.1
Identities = 16/65 (24%), Positives = 30/65 (46%)
Frame = -1
Query: 391 SSPGANLIQFMTLTLNDLSKVTRLGMATGSLNELRGQQAVCLSAVHHQLEVD*AASLVAV 212
+S G L + L+ +V R + ++ ++ QAV +S ++ AAS+V
Sbjct: 57 TSSGVTLAGNRYIYLSGTDRVIRAKLGKVGVHCMKTTQAVVVSLYEDPIQPQQAASVVEK 116
Query: 211 VEDVL 197
+ D L
Sbjct: 117 LGDYL 121
>DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein.
Length = 495
Score = 21.0 bits (42), Expect = 9.4
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +2
Query: 80 LPTTTRSPTRE 112
+PTTT SPT E
Sbjct: 379 VPTTTASPTTE 389
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,481
Number of Sequences: 438
Number of extensions: 3732
Number of successful extensions: 13
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17971191
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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