Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0836
         (700 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    25   0.59 
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    25   0.59 
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    22   5.5  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    21   7.3  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     21   7.3  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   9.7  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   9.7  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    21   9.7  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   9.7  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 25.0 bits (52), Expect = 0.59
 Identities = 12/48 (25%), Positives = 28/48 (58%)
 Frame = +1

Query: 169 CVFQVQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDV 312
           C+  V  Y + L +   +++I+ F  +   LN+ LET+  Q++++ ++
Sbjct: 175 CLMDV--YYEFLLISLINILIRSFKSRYKDLNQKLETACEQSKSVEEL 220


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 25.0 bits (52), Expect = 0.59
 Identities = 14/57 (24%), Positives = 25/57 (43%)
 Frame = +2

Query: 479 SVILYILLSHTLGNLLKIQTYSKCGFHL*FRKLRMGTIFGVSIQEDTLAEIQSVESE 649
           S++ Y+  S    N   ++ + K  FH  F  +    +FG+ +    L  +  V SE
Sbjct: 162 SMLNYVYSSKCENNSTGVEHFFKKQFHYIFTYMPYNIVFGLCLTTFGLLPVNGVTSE 218


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +3

Query: 288 SKSEFIGRTSGFKHSNTNTTCN 353
           S SEF+  T   K  NT+TT N
Sbjct: 346 SLSEFLTNTHKRKIENTSTTFN 367


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 12/47 (25%), Positives = 24/47 (51%)
 Frame = -1

Query: 409 WITQMSPVFDV*HLAHCLTLQVVLVLECLNPDVRPINSDFESLMSLV 269
           W++ MS  F+V    H   ++V+  +E L   V  +N++   L + +
Sbjct: 477 WVSAMSRPFEVRFNPHTGRVEVLDSVEKLETLVHQLNTEVLHLSNAI 523


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = +2

Query: 431 LGSMYCRMVQYPATSHSVILYILLSHTL 514
           L  M    + +PA +HS +L   + H L
Sbjct: 111 LSHMQFMQLPHPAAAHSALLSPAMPHNL 138


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/35 (22%), Positives = 16/35 (45%)
 Frame = +1

Query: 106 AMVFCCIVQXXXXXXXXXXXXCVFQVQDYKDSLKL 210
           +MVFC I+              +F+ +D ++S  +
Sbjct: 71  SMVFCIIIMCLGVIGNVMVPIVIFKTKDMRNSTNI 105


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/35 (22%), Positives = 16/35 (45%)
 Frame = +1

Query: 106 AMVFCCIVQXXXXXXXXXXXXCVFQVQDYKDSLKL 210
           +MVFC I+              +F+ +D ++S  +
Sbjct: 71  SMVFCIIIMCLGVIGNVMVPIVIFKTKDMRNSTNI 105


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -1

Query: 160 LCRHLIIKFIG 128
           LC HLI  F+G
Sbjct: 48  LCTHLIYSFVG 58


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +3

Query: 189 LQRFFETKGGAFDN 230
           ++RFF + G AFDN
Sbjct: 171 IKRFFTSLGIAFDN 184


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,749
Number of Sequences: 336
Number of extensions: 3468
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)