Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0835
(760 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P26373 Cluster: 60S ribosomal protein L13; n=111; Eukar... 216 4e-55
UniRef50_Q9FF90 Cluster: 60S ribosomal protein L13-3; n=27; Viri... 150 3e-35
UniRef50_Q4PAD9 Cluster: 60S ribosomal protein L13; n=2; Basidio... 142 1e-32
UniRef50_Q57V55 Cluster: 60S ribosomal protein L13, putative; n=... 134 2e-30
UniRef50_O59931 Cluster: 60S ribosomal protein L13; n=5; Ascomyc... 134 2e-30
UniRef50_UPI0000D563A2 Cluster: PREDICTED: similar to 60S riboso... 127 3e-28
UniRef50_A1D9H8 Cluster: 60S ribosomal protein L13; n=26; Fungi/... 117 4e-25
UniRef50_Q4N9B5 Cluster: 60S ribosomal protein L13e, putative; n... 112 8e-24
UniRef50_A0CPH3 Cluster: 60S ribosomal protein L13; n=9; Oligohy... 110 4e-23
UniRef50_A3FQ93 Cluster: 60S ribosomal protein L13, putative; n=... 106 5e-22
UniRef50_UPI0000DC2213 Cluster: UPI0000DC2213 related cluster; n... 95 2e-18
UniRef50_A2EYN3 Cluster: 60S ribosomal protein L13; n=6; Trichom... 95 2e-18
UniRef50_Q4X4D3 Cluster: 60S ribosomal protein L13, putative; n=... 86 8e-16
UniRef50_Q8SSC1 Cluster: 60S RIBOSOMAL PROTEIN L13; n=1; Encepha... 83 1e-14
UniRef50_O15616 Cluster: 60S ribosomal protein L13; n=3; Entamoe... 81 4e-14
UniRef50_Q9AW85 Cluster: 60S ribosomal protein L13; n=1; Guillar... 54 5e-06
UniRef50_A3DKW5 Cluster: 50S ribosomal protein L13e; n=1; Staphy... 46 0.001
UniRef50_Q9YEN9 Cluster: 50S ribosomal protein L13e; n=3; Desulf... 45 0.002
UniRef50_Q018B3 Cluster: Chromosome 05 contig 1, DNA sequence; n... 43 0.009
UniRef50_Q8ZWS7 Cluster: 60S ribosomal protein L13; n=4; Pyrobac... 42 0.022
UniRef50_A3H6W8 Cluster: Ribosomal protein L13; n=1; Caldivirga ... 42 0.022
UniRef50_P58469 Cluster: 50S ribosomal protein L13e; n=1; Sulfol... 40 0.050
UniRef50_Q97W05 Cluster: 50S ribosomal protein L13e; n=2; Sulfol... 40 0.050
UniRef50_Q6LAB9 Cluster: 60S ribosomal protein L13; n=1; Arabido... 40 0.067
UniRef50_A1RY56 Cluster: 60S ribosomal protein L13; n=1; Thermof... 40 0.088
UniRef50_A2YRI3 Cluster: 60S ribosomal protein L13; n=2; Oryza s... 39 0.15
UniRef50_A0LE03 Cluster: Serine/threonine protein kinase; n=1; M... 38 0.36
UniRef50_Q0UNB4 Cluster: Predicted protein; n=1; Phaeosphaeria n... 37 0.62
UniRef50_UPI00015BAF4C Cluster: LSU ribosomal protein L13E; n=1;... 35 1.9
UniRef50_Q7KTI0 Cluster: CG17608-PA, isoform A; n=3; Sophophora|... 34 3.3
UniRef50_Q1RS46 Cluster: Polyketide synthase type I; n=3; Bacill... 34 4.4
UniRef50_A0Z0U9 Cluster: Beta-glucosidase; n=1; marine gamma pro... 34 4.4
UniRef50_Q01GC3 Cluster: Predicted E3 ubiquitin ligase; n=1; Ost... 34 4.4
UniRef50_Q54070 Cluster: Poly(3-hydroxybutyrate) depolymerase; n... 33 7.7
>UniRef50_P26373 Cluster: 60S ribosomal protein L13; n=111;
Eukaryota|Rep: 60S ribosomal protein L13 - Homo sapiens
(Human)
Length = 211
Score = 216 bits (528), Expect = 4e-55
Identities = 115/196 (58%), Positives = 135/196 (68%), Gaps = 1/196 (0%)
Frame = -3
Query: 662 RXWQXFVKXWFNQPAXXXXXXXXXXXXXXXXXXXXXXXPLRPIVRCPTVRYHTKVRAGRG 483
+ WQ V WFNQPA P+RPIVRCPTVRYHTKVRAGRG
Sbjct: 16 KDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAGRG 75
Query: 482 FTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFP-KGKKVL 306
F+L E+R AG++ ARTIGI+VDPRRRNKS ESLQ NVQR+KEYR++LILFP K
Sbjct: 76 FSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPK 135
Query: 305 KGEANEEERKLATQLRGPLMPVQQPAPKSVARPITEDEKNFKAYQYLRGARSIAKLVGIR 126
KG+++ EE KLATQL GP+MPV+ K AR ITE+EKNFKA+ LR AR+ A+L GIR
Sbjct: 136 KGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMARANARLFGIR 195
Query: 125 AKRLKDAAENPDDVTK 78
AKR K+AAE DV K
Sbjct: 196 AKRAKEAAE--QDVEK 209
>UniRef50_Q9FF90 Cluster: 60S ribosomal protein L13-3; n=27;
Viridiplantae|Rep: 60S ribosomal protein L13-3 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 206
Score = 150 bits (364), Expect = 3e-35
Identities = 79/187 (42%), Positives = 111/187 (59%), Gaps = 1/187 (0%)
Frame = -3
Query: 662 RXWQXFVKXWFNQPAXXXXXXXXXXXXXXXXXXXXXXXPLRPIVRCPTVRYHTKVRAGRG 483
+ WQ +VK WFNQPA PLRP+V T++Y+ KVRAG+G
Sbjct: 14 KHWQNYVKTWFNQPARKTRRRVARQKKAVKIFPRPTSGPLRPVVHGQTLKYNMKVRAGKG 73
Query: 482 FTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFP-KGKKVL 306
FTL E++ AG+ A TIGI+VD RR+N+S+E LQ NVQR+K Y+A+L++FP + ++V
Sbjct: 74 FTLEELKVAGIPKKLAPTIGISVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRSRQVK 133
Query: 305 KGEANEEERKLATQLRGPLMPVQQPAPKSVARPITEDEKNFKAYQYLRGARSIAKLVGIR 126
G++ EE ATQ++G MP+ +T D K FKAY +R R+ A+ G R
Sbjct: 134 AGDSTPEELANATQVQGDYMPIASVKAAMELVKLTADLKAFKAYDKIRLERTNARHAGAR 193
Query: 125 AKRLKDA 105
AKR +A
Sbjct: 194 AKRAAEA 200
>UniRef50_Q4PAD9 Cluster: 60S ribosomal protein L13; n=2;
Basidiomycota|Rep: 60S ribosomal protein L13 - Ustilago
maydis (Smut fungus)
Length = 209
Score = 142 bits (343), Expect = 1e-32
Identities = 77/189 (40%), Positives = 107/189 (56%), Gaps = 1/189 (0%)
Frame = -3
Query: 662 RXWQXFVKXWFNQPAXXXXXXXXXXXXXXXXXXXXXXXPLRPIVRCPTVRYHTKVRAGRG 483
+ WQ VK WF+QP LRP VRCPT+RY+TK+R+GRG
Sbjct: 16 KDWQRRVKVWFDQPGAKKRRRTAREAKAAKLGLRPVQL-LRPAVRCPTLRYNTKIRSGRG 74
Query: 482 FTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFPKGKKVLK 303
FT+ E++AAGL +AR++GI VD RRRNKS ESL++NV+RIK Y+ARL++ PK K K
Sbjct: 75 FTIEEVKAAGLGKKYARSVGIPVDHRRRNKSEESLKLNVERIKAYQARLVVIPKLTKKNK 134
Query: 302 GEANEEERKLATQLRGPLMPVQQPAPKSVARPITEDEKNFKAYQYLRGARSIAKLVG-IR 126
+ + A + ++P+ R IT +EK F AY+ LR AR + G ++
Sbjct: 135 DKKVDLSNVEAVRQVQSVLPLPAGTEAEKPRAITSEEKEFNAYETLRKARGTHRAAGKVK 194
Query: 125 AKRLKDAAE 99
A+ K E
Sbjct: 195 ARIAKKEEE 203
>UniRef50_Q57V55 Cluster: 60S ribosomal protein L13, putative; n=7;
Trypanosomatidae|Rep: 60S ribosomal protein L13,
putative - Trypanosoma brucei
Length = 229
Score = 134 bits (324), Expect = 2e-30
Identities = 83/191 (43%), Positives = 108/191 (56%), Gaps = 8/191 (4%)
Frame = -3
Query: 644 VKXWFNQPAXXXXXXXXXXXXXXXXXXXXXXXPLRPIVRCPTVRYHTKVRAGRGFTLREI 465
VK +FNQPA LRP V CPTVRY+ K R GRGF+L E+
Sbjct: 38 VKVFFNQPAQKQRRRRLRLLKAKKIFPRPLKA-LRPQVNCPTVRYNMKRRLGRGFSLEEL 96
Query: 464 RAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANE 288
+AAG+ P +ARTIGI VD RR+NKS E + INVQR+K Y ++L+LFP KK KG+A E
Sbjct: 97 KAAGVKPRYARTIGIRVDRRRKNKSEEGMNINVQRLKTYMSKLVLFPLNRKKPQKGDATE 156
Query: 287 EERKLATQLR-----GPLMPVQQPAPKSVARPITEDEKNFKAYQYLRGARSIAKLVGIRA 123
EE K ATQ R + + PA + R +TE+E K Y++L+ S + R
Sbjct: 157 EEVKAATQDRSRYGTAAVGGLVTPA-REAPRKVTEEESTKKMYKFLKKNHSAVRFFRARN 215
Query: 122 KRL--KDAAEN 96
+R K+A EN
Sbjct: 216 RRAARKEAKEN 226
>UniRef50_O59931 Cluster: 60S ribosomal protein L13; n=5;
Ascomycota|Rep: 60S ribosomal protein L13 - Candida
albicans (Yeast)
Length = 202
Score = 134 bits (324), Expect = 2e-30
Identities = 73/149 (48%), Positives = 100/149 (67%)
Frame = -3
Query: 545 LRPIVRCPTVRYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINV 366
LRP+VR PTV+Y+ KVRAGRGFTL E++A G+ P +ARTIGI+VD RR+NKS E+ NV
Sbjct: 54 LRPVVRAPTVKYNRKVRAGRGFTLAELKAVGIAPKYARTIGISVDHRRQNKSQETFDANV 113
Query: 365 QRIKEYRARLILFPKGKKVLKGEANEEERKLATQLRGPLMPVQQPAPKSVARPITEDEKN 186
R++EY+++L++F K K + + E+ AT PV+QPAP+S R + E+
Sbjct: 114 ARLQEYKSKLVIFDKKTKASEVASFEQVDVSAT------FPVEQPAPESGLRAVEVPEQT 167
Query: 185 FKAYQYLRGARSIAKLVGIRAKRLKDAAE 99
AY+ LR AR+ K GIR KR K+ AE
Sbjct: 168 --AYRTLRLARNEKKYKGIREKRAKEKAE 194
>UniRef50_UPI0000D563A2 Cluster: PREDICTED: similar to 60S ribosomal
protein L13; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to 60S ribosomal protein L13 - Tribolium
castaneum
Length = 198
Score = 127 bits (307), Expect = 3e-28
Identities = 75/183 (40%), Positives = 100/183 (54%), Gaps = 1/183 (0%)
Frame = -3
Query: 662 RXWQXFVKXWFNQPAXXXXXXXXXXXXXXXXXXXXXXXPLRPIVRCPTVRYHTKVRAGRG 483
+ WQ VK WFNQP LRP+V CP+ RY +KVRAGRG
Sbjct: 15 KKWQQKVKLWFNQPMKKLRRKALRAKKSRQLAPKPTEL-LRPLVHCPSERYKSKVRAGRG 73
Query: 482 FTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFPKGK-KVL 306
FT +E++ AG++ +AR+ G+AVDPRRRN+ ES+ N+QR+ EY++RLI P K KVL
Sbjct: 74 FTFQELKQAGMSDKYARSFGVAVDPRRRNRCTESIAANIQRLIEYKSRLIFLPDSKNKVL 133
Query: 305 KGEANEEERKLATQLRGPLMPVQQPAPKSVARPITEDEKNFKAYQYLRGARSIAKLVGIR 126
K + + L V+ K A + E+EK F+A+ LR AR K GIR
Sbjct: 134 KIDDGKN-----------LNVVKVVPGKVKALKVGEEEKKFEAFVTLRRARCDEKFAGIR 182
Query: 125 AKR 117
KR
Sbjct: 183 MKR 185
>UniRef50_A1D9H8 Cluster: 60S ribosomal protein L13; n=26;
Fungi/Metazoa group|Rep: 60S ribosomal protein L13 -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 243
Score = 117 bits (281), Expect = 4e-25
Identities = 80/212 (37%), Positives = 103/212 (48%), Gaps = 17/212 (8%)
Frame = -3
Query: 662 RXWQXFVKXWFNQPAXXXXXXXXXXXXXXXXXXXXXXXPLRPIVRCPTVRYHTKVRAGRG 483
+ WQ V+ F+QP LRP+VRCPTV+Y+ +VR GRG
Sbjct: 33 KDWQRRVRVHFDQPGRKHRRREARLAKAAAVAPRPVDK-LRPVVRCPTVKYNRRVRVGRG 91
Query: 482 FTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFPKGK---K 312
FTL E++ AG+ ART+GIAVD RR N S ESL NV R+K+Y+ARLILFP+ K
Sbjct: 92 FTLAELKEAGIPKKLARTVGIAVDHRRVNYSKESLVANVARLKDYKARLILFPRKSGQFK 151
Query: 311 VLKGEANEEERKLA-----------TQLRGPLMPVQQPAPKSVARPITEDE---KNFKAY 174
L A+E A T G + P++ + + DE AY
Sbjct: 152 KLDSSADEVNAAKAAFAAEGKTEGYTTKLGAIFPIKNISAAEAVTEVKRDELPKGEEAAY 211
Query: 173 QYLRGARSIAKLVGIRAKRLKDAAENPDDVTK 78
+ LR RS A+ GIR KR K AE K
Sbjct: 212 RRLRETRSEARYKGIREKRAKAKAEEESAAKK 243
>UniRef50_Q4N9B5 Cluster: 60S ribosomal protein L13e, putative; n=4;
Piroplasmida|Rep: 60S ribosomal protein L13e, putative -
Theileria parva
Length = 205
Score = 112 bits (270), Expect = 8e-24
Identities = 65/144 (45%), Positives = 86/144 (59%), Gaps = 9/144 (6%)
Frame = -3
Query: 545 LRPIVRCPTVRYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINV 366
LRP+V P+ RY+ K+R GRGFTL+E++ AGL AR++G+AVD RR NK ESL +NV
Sbjct: 53 LRPLVHMPSRRYNYKLRFGRGFTLQELKVAGLGKKVARSVGVAVDHRRTNKCAESLNLNV 112
Query: 365 QRIKEYRARLILFPKGKKVLKGEA-------NEEERKLA--TQLRGPLMPVQQPAPKSVA 213
R+K Y ++L+LFP+ K KG A E+ R LA Q +MPV Q K
Sbjct: 113 NRLKTYLSKLVLFPRKKHAKKGFAGLPSDTPREKLRTLALTKQSVKKVMPVVQEFVKEPP 172
Query: 212 RPITEDEKNFKAYQYLRGARSIAK 141
R +TE + + Y LR AR AK
Sbjct: 173 REVTEKDTSVNVYHKLRVARKAAK 196
>UniRef50_A0CPH3 Cluster: 60S ribosomal protein L13; n=9;
Oligohymenophorea|Rep: 60S ribosomal protein L13 -
Paramecium tetraurelia
Length = 208
Score = 110 bits (264), Expect = 4e-23
Identities = 72/194 (37%), Positives = 103/194 (53%), Gaps = 6/194 (3%)
Frame = -3
Query: 662 RXWQXFVKXWFNQPAXXXXXXXXXXXXXXXXXXXXXXXPLRPIVRCPTVRYHTKVRAGRG 483
+ W FVK ++NQPA LRP+VR T++Y++ + GRG
Sbjct: 14 KHWTRFVKTFYNQPAAKRRRQLRRRAQALSASPRPVEL-LRPVVRGQTIKYNSVQKLGRG 72
Query: 482 FTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFPK--GKK- 312
F+L E++ AGLN FART+GI+VD RRRN + E L NV+R+K Y ++L+L+P+ GK
Sbjct: 73 FSLIELKEAGLNAAFARTVGISVDHRRRNLNQEELNNNVKRLKAYLSKLVLYPRVAGKPK 132
Query: 311 --VLKGEANEEERKLATQLRGPLMPVQQPAPK-SVARPITEDEKNFKAYQYLRGARSIAK 141
V+K NE Q P + Q PK A I+++ + Y+ LR AK
Sbjct: 133 NGVVKDSTNEVVAHPVAQNTNPEVLTFQRTPKREKATVISKELRAKNVYRRLRQEWYNAK 192
Query: 140 LVGIRAKRLKDAAE 99
VG++ KR K A E
Sbjct: 193 FVGVKEKR-KQAKE 205
>UniRef50_A3FQ93 Cluster: 60S ribosomal protein L13, putative; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L13, putative
- Cryptosporidium parvum Iowa II
Length = 207
Score = 106 bits (255), Expect = 5e-22
Identities = 70/195 (35%), Positives = 96/195 (49%), Gaps = 8/195 (4%)
Frame = -3
Query: 662 RXWQXFVKXWFNQPAXXXXXXXXXXXXXXXXXXXXXXXPLRPIVRCPTVRYHTKVRAGRG 483
+ ++ ++K W+NQP LRPIV PT RY+ K R GRG
Sbjct: 14 KNYKRWIKTWYNQPGRKQSRRIARQKAVAEAGFRPVGM-LRPIVHPPTQRYNMKTRLGRG 72
Query: 482 FTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFP-KGKKVL 306
FTL E+ A G+N A +IGIAVD RR + S E+ QINV R+K+Y ++L P KGKK
Sbjct: 73 FTLEELSACGINKKAAMSIGIAVDHRRTDLSEETFQINVDRLKKYINGIVLQPRKGKKTK 132
Query: 305 KG-------EANEEERKLATQLRGPLMPVQQPAPKSVARPITEDEKNFKAYQYLRGARSI 147
KG A EE + L P++ IT +E+ F+A+ LR
Sbjct: 133 KGFAGIPNDSAREEFKALKNVSHEKAFPIKAQTLAVKTHVITPEERKFRAFSTLRKQFIE 192
Query: 146 AKLVGIRAKRLKDAA 102
AK G +A + K +A
Sbjct: 193 AKNFGKKATKAKASA 207
>UniRef50_UPI0000DC2213 Cluster: UPI0000DC2213 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC2213 UniRef100 entry -
Rattus norvegicus
Length = 173
Score = 95.1 bits (226), Expect = 2e-18
Identities = 44/90 (48%), Positives = 63/90 (70%)
Frame = -3
Query: 545 LRPIVRCPTVRYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINV 366
+RPIVRCPTVRYHTKVR GRGF+L EIR AG++ ARTI I+VDP+++ K E +
Sbjct: 13 IRPIVRCPTVRYHTKVRGGRGFSLEEIRLAGIHKKMARTIDISVDPKKKKKKKERKKEKN 72
Query: 365 QRIKEYRARLILFPKGKKVLKGEANEEERK 276
+R+ E + I++PK +K + + +E +K
Sbjct: 73 ERVTETNQKDIIYPKREKEREKKGMKEGKK 102
>UniRef50_A2EYN3 Cluster: 60S ribosomal protein L13; n=6;
Trichomonas vaginalis G3|Rep: 60S ribosomal protein L13
- Trichomonas vaginalis G3
Length = 210
Score = 95.1 bits (226), Expect = 2e-18
Identities = 51/118 (43%), Positives = 66/118 (55%)
Frame = -3
Query: 662 RXWQXFVKXWFNQPAXXXXXXXXXXXXXXXXXXXXXXXPLRPIVRCPTVRYHTKVRAGRG 483
+ W VK +F+ PA PLRPIVRCPTVRY+ K R GRG
Sbjct: 36 KYWYHRVKTYFDDPARAQRRRNARNLRAKKIAPRPAEGPLRPIVRCPTVRYNMKTRLGRG 95
Query: 482 FTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLILFPKGKKV 309
FT +E+ AAG +P AR GIAVD RR + ++ NV+R++ Y+ARLI KG+ V
Sbjct: 96 FTPKELVAAGFDPALARFQGIAVDARRAHSKDAMVKQNVERLQAYKARLIKVKKGETV 153
>UniRef50_Q4X4D3 Cluster: 60S ribosomal protein L13, putative; n=5;
Plasmodium|Rep: 60S ribosomal protein L13, putative -
Plasmodium chabaudi
Length = 215
Score = 86.2 bits (204), Expect = 8e-16
Identities = 58/163 (35%), Positives = 87/163 (53%), Gaps = 10/163 (6%)
Frame = -3
Query: 545 LRPIVRCPTVRYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINV 366
L P+V CPT RY+ K R G+GFTL EI+A L P AR+IGI VD RR+N+ ESL+ N
Sbjct: 53 LHPVVHCPTQRYNYKTRLGKGFTLEEIKAVKLTPSAARSIGIIVDKRRKNRCEESLKENA 112
Query: 365 QRIKEYRARLILFP----KGKKVLKG---EANE---EERKLATQLRGPLMPVQQPAPKSV 216
+R+++Y L++ P K K + G +A + E+ K QLR P
Sbjct: 113 ERLQKYLNSLVMIPLKKDKPKNGIGGIPADATKEVIEQHKERKQLRSIFKKGSSVKPFYE 172
Query: 215 ARPITEDEKNFKAYQYLRGARSIAKLVGIRAKRLKDAAENPDD 87
++ +++ AY+ LR A+ +A+ R ++ KD D
Sbjct: 173 TIETSKIDQSSSAYKTLRKAK-LAERRKNRQQQRKDIKRKSKD 214
>UniRef50_Q8SSC1 Cluster: 60S RIBOSOMAL PROTEIN L13; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L13
- Encephalitozoon cuniculi
Length = 163
Score = 82.6 bits (195), Expect = 1e-14
Identities = 47/107 (43%), Positives = 63/107 (58%)
Frame = -3
Query: 545 LRPIVRCPTVRYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINV 366
LRPIVRCPT++Y+ R GRGFT E AGL+ AR +GIAVD RRR+ + E+ NV
Sbjct: 51 LRPIVRCPTIKYNRNERLGRGFTAAECEKAGLDYRHARRLGIAVDLRRRDTNQEAFDKNV 110
Query: 365 QRIKEYRARLILFPKGKKVLKGEANEEERKLATQLRGPLMPVQQPAP 225
+RIK Y ++ ++ K EA E K T+ +MP +P P
Sbjct: 111 ERIKTYLGKITIYESVK-----EARESGAKPYTK---EIMPFVKPKP 149
>UniRef50_O15616 Cluster: 60S ribosomal protein L13; n=3; Entamoeba
histolytica|Rep: 60S ribosomal protein L13 - Entamoeba
histolytica
Length = 138
Score = 80.6 bits (190), Expect = 4e-14
Identities = 40/80 (50%), Positives = 53/80 (66%)
Frame = -3
Query: 545 LRPIVRCPTVRYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINV 366
L+P V C R++ K+R GRGF+L+E+RAA ++ ARTIGIAVDPRR+ S E L N
Sbjct: 52 LKPSVHCMNQRFNYKLRLGRGFSLKELRAAKIDKNLARTIGIAVDPRRKESSKECLTRNA 111
Query: 365 QRIKEYRARLILFPKGKKVL 306
QR+ EY RL L K++
Sbjct: 112 QRLTEYMNRLCLKSVSVKIV 131
>UniRef50_Q9AW85 Cluster: 60S ribosomal protein L13; n=1; Guillardia
theta|Rep: 60S ribosomal protein L13 - Guillardia theta
(Cryptomonas phi)
Length = 127
Score = 53.6 bits (123), Expect = 5e-06
Identities = 20/53 (37%), Positives = 39/53 (73%)
Frame = -3
Query: 545 LRPIVRCPTVRYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSV 387
L+P+V+CPT ++TK++ GRGF+++EI+ + + A + GI++D RR+ ++
Sbjct: 54 LKPLVKCPTRMHNTKIKLGRGFSIQEIKKSMIKLKTATSYGISIDKRRKKSNI 106
>UniRef50_A3DKW5 Cluster: 50S ribosomal protein L13e; n=1;
Staphylothermus marinus F1|Rep: 50S ribosomal protein
L13e - Staphylothermus marinus (strain ATCC 43588 / DSM
3639 / F1)
Length = 86
Score = 46.0 bits (104), Expect = 0.001
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 4/72 (5%)
Frame = -3
Query: 539 PIVRCPTVRYH----TKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQI 372
PIVR P +R H +R GRGF+ +E+ A GL+ A+ +G+ +D RRR +
Sbjct: 10 PIVRKPMLRKHGGLSPGLRVGRGFSKKELEAVGLDLKTAKKLGLRIDKRRRTIH----EW 65
Query: 371 NVQRIKEYRARL 336
NVQ +++Y ++
Sbjct: 66 NVQALRDYLTKI 77
>UniRef50_Q9YEN9 Cluster: 50S ribosomal protein L13e; n=3;
Desulfurococcales|Rep: 50S ribosomal protein L13e -
Aeropyrum pernix
Length = 80
Score = 44.8 bits (101), Expect = 0.002
Identities = 24/53 (45%), Positives = 36/53 (67%), Gaps = 3/53 (5%)
Frame = -3
Query: 500 VRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNK---SVESLQINVQRIKE 351
VR GRGF+L E+ AGL+ AR +G+ VD RRR +VE+L+ ++R++E
Sbjct: 23 VRRGRGFSLGELAEAGLDAKKARKLGLHVDTRRRTVHPWNVEALKKYIERLRE 75
>UniRef50_Q018B3 Cluster: Chromosome 05 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 05 contig 1, DNA
sequence - Ostreococcus tauri
Length = 527
Score = 42.7 bits (96), Expect = 0.009
Identities = 25/56 (44%), Positives = 28/56 (50%)
Frame = +1
Query: 400 RLRGSTAIPIVRANTGFNPAALISRRVNPLPARTLVWYRTVGHRTIGRNGPAAGRG 567
++R S VRA T S V P P R L YR VG TIGR+ PA GRG
Sbjct: 388 KIRVSLTTLAVRARTMAITRTFNSSSVKPRPRRVLKLYRCVGGCTIGRSAPATGRG 443
>UniRef50_Q8ZWS7 Cluster: 60S ribosomal protein L13; n=4;
Pyrobaculum|Rep: 60S ribosomal protein L13 - Pyrobaculum
aerophilum
Length = 159
Score = 41.5 bits (93), Expect = 0.022
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Frame = -3
Query: 542 RPIVRCPTVRYH---TKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQ 375
+P+V+ P H K + GRGF++ E+RA GL+ AR +GI VD RR ++++
Sbjct: 6 KPLVKTPAKITHGGVVKWKYGRGFSIGELRALGLSVDQARLLGIPVDERRETSWPQNIE 64
>UniRef50_A3H6W8 Cluster: Ribosomal protein L13; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L13 -
Caldivirga maquilingensis IC-167
Length = 144
Score = 41.5 bits (93), Expect = 0.022
Identities = 21/57 (36%), Positives = 38/57 (66%)
Frame = -3
Query: 503 KVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLI 333
K++ GRGF++ EI+A L AR +GI VD RR++ + + NV+ ++EY ++++
Sbjct: 17 KMKQGRGFSISEIKAINLTVNEARLLGIPVDTRRKS----TWEWNVKALQEYVSKVV 69
>UniRef50_P58469 Cluster: 50S ribosomal protein L13e; n=1;
Sulfolobus tokodaii|Rep: 50S ribosomal protein L13e -
Sulfolobus tokodaii
Length = 77
Score = 40.3 bits (90), Expect = 0.050
Identities = 18/68 (26%), Positives = 43/68 (63%), Gaps = 3/68 (4%)
Frame = -3
Query: 545 LRPIVRCPTVRYHTK---VRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQ 375
+ PIV+ P R+ + + G+GF+L+E++ +G + A+ + + +D RR+ E+++
Sbjct: 2 VEPIVKRPHYRFEIRKKDTKIGKGFSLKELKESGFSVQEAKKLRVRIDKRRKTSYPENVE 61
Query: 374 INVQRIKE 351
+ ++++KE
Sbjct: 62 V-LKKLKE 68
>UniRef50_Q97W05 Cluster: 50S ribosomal protein L13e; n=2;
Sulfolobus solfataricus|Rep: 50S ribosomal protein L13e
- Sulfolobus solfataricus
Length = 79
Score = 40.3 bits (90), Expect = 0.050
Identities = 25/54 (46%), Positives = 35/54 (64%)
Frame = -3
Query: 497 RAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARL 336
R GRGF++ E+ AGLN AR +GI VD RR KSV + NV+ +K++ +L
Sbjct: 25 RIGRGFSVGELEKAGLNINKARKLGIFVDIRR--KSVH--EENVETLKKFSEQL 74
>UniRef50_Q6LAB9 Cluster: 60S ribosomal protein L13; n=1;
Arabidopsis thaliana|Rep: 60S ribosomal protein L13 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 87
Score = 39.9 bits (89), Expect = 0.067
Identities = 16/32 (50%), Positives = 24/32 (75%)
Frame = -3
Query: 545 LRPIVRCPTVRYHTKVRAGRGFTLREIRAAGL 450
LRP+V T++Y+ KV +GFTL E++AAG+
Sbjct: 52 LRPVVHGQTLKYNMKVSTXKGFTLEELKAAGI 83
>UniRef50_A1RY56 Cluster: 60S ribosomal protein L13; n=1;
Thermofilum pendens Hrk 5|Rep: 60S ribosomal protein L13
- Thermofilum pendens (strain Hrk 5)
Length = 157
Score = 39.5 bits (88), Expect = 0.088
Identities = 21/54 (38%), Positives = 36/54 (66%), Gaps = 3/54 (5%)
Frame = -3
Query: 500 VRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRN---KSVESLQINVQRIKEY 348
++ GRGF+ E++A GL AR +GI VD RR+ ++VE+L+ ++ +KE+
Sbjct: 30 LKVGRGFSEGEVKALGLTVKEARLLGIYVDERRKTVHPENVEALRSWLKALKEH 83
>UniRef50_A2YRI3 Cluster: 60S ribosomal protein L13; n=2; Oryza
sativa|Rep: 60S ribosomal protein L13 - Oryza sativa
subsp. indica (Rice)
Length = 138
Score = 38.7 bits (86), Expect = 0.15
Identities = 15/26 (57%), Positives = 21/26 (80%)
Frame = -3
Query: 539 PIVRCPTVRYHTKVRAGRGFTLREIR 462
PIV+C T++Y+ K RAGRGF L E++
Sbjct: 47 PIVQCQTLKYNMKSRAGRGFILEELK 72
>UniRef50_A0LE03 Cluster: Serine/threonine protein kinase; n=1;
Magnetococcus sp. MC-1|Rep: Serine/threonine protein
kinase - Magnetococcus sp. (strain MC-1)
Length = 1143
Score = 37.5 bits (83), Expect = 0.36
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Frame = -3
Query: 413 DPRRRNKSVESLQINVQRIKEYRAR---LILFPKGKKVLKGEANEEERKLATQLRGPLM- 246
D +R N+ + LQ N +R + + R ++L P+ +++ A ER L+
Sbjct: 733 DEKRVNRLEQRLQANKERYRTTQLRGDEMLLKPEAGEIIPNSAPPRERDEPFMASQNLIT 792
Query: 245 PVQQPAPKSVARPITEDEKNFKA 177
P PAP+S A + EDEKNF A
Sbjct: 793 PAAPPAPRS-ASFLEEDEKNFTA 814
>UniRef50_Q0UNB4 Cluster: Predicted protein; n=1; Phaeosphaeria
nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
(Septoria nodorum)
Length = 365
Score = 36.7 bits (81), Expect = 0.62
Identities = 22/55 (40%), Positives = 30/55 (54%)
Frame = -3
Query: 326 PKGKKVLKGEANEEERKLATQLRGPLMPVQQPAPKSVARPITEDEKNFKAYQYLR 162
PKGKK K A EEE +A Q+ P+ PV K V ++E++K YQ L+
Sbjct: 297 PKGKKQKKKSAVEEEGSVAPQVAQPVKPVH--IDKFVRPTVSENKKPSSRYQILQ 349
>UniRef50_UPI00015BAF4C Cluster: LSU ribosomal protein L13E; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L13E - Ignicoccus hospitalis KIN4/I
Length = 96
Score = 35.1 bits (77), Expect = 1.9
Identities = 24/66 (36%), Positives = 39/66 (59%)
Frame = -3
Query: 545 LRPIVRCPTVRYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINV 366
L P++R + K+R GRGF+ E+ A GL+ A +GI +D RR K+V + NV
Sbjct: 29 LTPVLRKDAGK-KPKMRRGRGFSKGELEAVGLDFKKALKMGIPIDKRR--KTVH--EWNV 83
Query: 365 QRIKEY 348
+ +K++
Sbjct: 84 EALKKW 89
>UniRef50_Q7KTI0 Cluster: CG17608-PA, isoform A; n=3;
Sophophora|Rep: CG17608-PA, isoform A - Drosophila
melanogaster (Fruit fly)
Length = 271
Score = 34.3 bits (75), Expect = 3.3
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Frame = -3
Query: 416 VDPRRRNKSVESLQINVQRIKEYRARLILFPKGKKVLKGEA---NEEERKLATQLRGPLM 246
+D R+ S+ SLQ + I+E +L+LFP+G + K + +A Q + P+
Sbjct: 141 IDRSRKTDSINSLQKEAKAIQERNCKLLLFPEGTRNSKDSLLPFKKGSFHIALQGKSPVQ 200
Query: 245 PV 240
PV
Sbjct: 201 PV 202
>UniRef50_Q1RS46 Cluster: Polyketide synthase type I; n=3;
Bacillus|Rep: Polyketide synthase type I - Bacillus
amyloliquefaciens
Length = 1917
Score = 33.9 bits (74), Expect = 4.4
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Frame = -3
Query: 371 NVQRIKEYRARLILF-----PKGKKVLKGEANEEERKLATQLRGPLMPVQQPAPKSVARP 207
N +R+KEY ARL++F P+G L + + + +L LRG L V A SV
Sbjct: 895 NPERLKEYAARLLMFLKDEAPEGSGPLYDKIDTMQNQLEDALRGVLAEVLHVASGSV--- 951
Query: 206 ITEDEKNFKAY 174
+DE+++K +
Sbjct: 952 --DDEQDWKEF 960
>UniRef50_A0Z0U9 Cluster: Beta-glucosidase; n=1; marine gamma
proteobacterium HTCC2080|Rep: Beta-glucosidase - marine
gamma proteobacterium HTCC2080
Length = 824
Score = 33.9 bits (74), Expect = 4.4
Identities = 18/56 (32%), Positives = 31/56 (55%)
Frame = -3
Query: 500 VRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRARLI 333
V A G T RE++A G++ +FA T+ +A D R ++ ES + Q + Y ++
Sbjct: 153 VAAISGATAREVKATGIDWIFAPTVAVAQD-YRWGRTYESYSSDPQVVSSYAGGMV 207
>UniRef50_Q01GC3 Cluster: Predicted E3 ubiquitin ligase; n=1;
Ostreococcus tauri|Rep: Predicted E3 ubiquitin ligase -
Ostreococcus tauri
Length = 355
Score = 33.9 bits (74), Expect = 4.4
Identities = 31/112 (27%), Positives = 48/112 (42%), Gaps = 1/112 (0%)
Frame = -3
Query: 521 TVRYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVDPRRRNKSVESLQINVQRIKEYRA 342
T R + + GR L I A +N AR +G R R + +N R E
Sbjct: 247 TTRVNAIIEYGRVPDLAAI-AREVNREEARKVGAGAKARIRAITATPSSLNSSRRFEIEV 305
Query: 341 RLILFPKGKKVLKGEANEEERKLATQL-RGPLMPVQQPAPKSVARPITEDEK 189
R + P G+ + +EEE + L ++P+ Q AP+ V P +DE+
Sbjct: 306 RRVRPPAGRTMDNHHDDEEEAEEERSLSEDEILPLSQAAPRYV--PTDDDEE 355
>UniRef50_Q54070 Cluster: Poly(3-hydroxybutyrate) depolymerase; n=1;
Streptomyces exfoliatus|Rep: Poly(3-hydroxybutyrate)
depolymerase - Streptomyces exfoliatus (Streptomyces
hydrogenans)
Length = 488
Score = 33.1 bits (72), Expect = 7.7
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +3
Query: 360 SLNIDLQ*FNRLVASTGIYSNSNRSGKYWVQSCGPNFTKSESS 488
++N DL + R + +Y NS+ SG WV GPN S +S
Sbjct: 143 AVNDDLATYYRDFGADVVYDNSSASGHAWVSPLGPNSCSSTTS 185
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 610,936,290
Number of Sequences: 1657284
Number of extensions: 11184143
Number of successful extensions: 28737
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 27855
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28714
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62969581935
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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