Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0833
         (650 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    26   0.31 
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    26   0.31 
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    23   2.2  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    22   5.0  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    22   5.0  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    22   5.0  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   8.8  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 25.8 bits (54), Expect = 0.31
 Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = +1

Query: 412 LHXKAKCEEVFNACNDPLIKKQL-CYLLARQYIPL 513
           +H   KC+E     +    KK+L CYLLAR Y+ L
Sbjct: 111 IHFDTKCQENSTVIDYKRHKKRLLCYLLAR-YVAL 144


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 25.8 bits (54), Expect = 0.31
 Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = +1

Query: 412 LHXKAKCEEVFNACNDPLIKKQL-CYLLARQYIPL 513
           +H   KC+E     +    KK+L CYLLAR Y+ L
Sbjct: 129 IHFDTKCQENSTVIDYKRHKKRLLCYLLAR-YVAL 162


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = +1

Query: 151 LPLVRDVITFDMKHSAEIQACDLLMEIDRLDLLTQHM 261
           + L  DV+ F +K       C+ L E  R + +T+H+
Sbjct: 221 IALNNDVLLFFVKVFRPEPLCERLFEASREEYVTRHL 257


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +1

Query: 325 PESTQILQGGLHTYLRFG 378
           P+S    Q GL  YLRFG
Sbjct: 255 PQSLLPSQTGLSPYLRFG 272


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 17/56 (30%), Positives = 24/56 (42%)
 Frame = -1

Query: 194 ECFMSNVITSRTSGNSESMFSIFHSSAISPSNCLTYSCPQSPTFDNVPRRQYFKHS 27
           E  +S V+ S+ +GNS    S   S  +S     TY     PT   VP  +   +S
Sbjct: 6   EPLLSGVV-SQINGNSGDSTSSATSIDLSTFRVPTYGTTSHPTSKLVPPDERITYS 60


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 17/56 (30%), Positives = 24/56 (42%)
 Frame = -1

Query: 194 ECFMSNVITSRTSGNSESMFSIFHSSAISPSNCLTYSCPQSPTFDNVPRRQYFKHS 27
           E  +S V+ S+ +GNS    S   S  +S     TY     PT   VP  +   +S
Sbjct: 6   EPLLSGVV-SQINGNSGDSTSSATSIDLSTFRVPTYGTTSHPTSKLVPPDERITYS 60


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -3

Query: 453 TGVEHFFTFSF 421
           TGVEHFF   F
Sbjct: 177 TGVEHFFKKQF 187


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,114
Number of Sequences: 336
Number of extensions: 2824
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)