Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0826
         (800 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    25   0.70 
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    24   1.6  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    24   1.6  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    22   5.0  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   8.7  

>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 25.0 bits (52), Expect = 0.70
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = -1

Query: 164 LAMNVHVTIKVNIRRVRRNTVLGDVQLISLFVYF 63
           L +N++ TI  N +   RN  +  +QL+ +F YF
Sbjct: 118 LLINLY-TINYNFKESERNDYVSLLQLVFVFCYF 150


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 19/66 (28%), Positives = 32/66 (48%)
 Frame = -1

Query: 767 IQNIYIFQRLTHQL*ILSFIINSMKLNPECSMFYINNLAKSDYVF*NMKRTILSIYLMYG 588
           I N+Y    L H+L I S +  ++ L   C +  I + AKS+      ++T+   Y +  
Sbjct: 264 IDNLY----LKHKLEISSLVQTAITLVAMCGLVLICDSAKSE-----SQQTVFLCYKLME 314

Query: 587 KFGSKS 570
           KF  +S
Sbjct: 315 KFPERS 320


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +2

Query: 572 IYFRIFHTSNKSIKSYVSYFKKRSLIWQDY 661
           IY + FH +   IK  + +FK+ SL   +Y
Sbjct: 51  IYSKSFHRNEIHIKIVLMFFKEASLYCFNY 80



 Score = 21.4 bits (43), Expect = 8.7
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = +1

Query: 604 IDKIVRFIFQKT*SDLARLLI*NIEHSGFNFIELI 708
           +D +   +++KT      L + NI   G NF+ L+
Sbjct: 234 LDNVDTIMYEKTNVTFVHLAVLNILRVGKNFVCLL 268


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 10/32 (31%), Positives = 20/32 (62%)
 Frame = -2

Query: 793 SDLGTRLLVYKIFTFSND*HINYKY*VLLSIR 698
           SD+ TRLL+  + + +ND   N ++ V  +++
Sbjct: 516 SDITTRLLLPTVLSMANDKVANVRFNVAKTLQ 547


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -3

Query: 339 FNATHCYFNLYQILVM 292
           FNA HCY     +L++
Sbjct: 813 FNAAHCYLATELVLML 828


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,839
Number of Sequences: 336
Number of extensions: 3870
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21791490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)